RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 TMEM109Q9BVC6 243 aa10.81□□□□□ -0.68
SAMM50-206ENST00000494795 KATNAL1Q9BW62 490 aa10.81□□□□□ -0.68
SAMM50-206ENST00000494795 FAM129AQ9BZQ8 928 aa10.81□□□□□ -0.68
SAMM50-206ENST00000494795 TRPV6Q9H1D0 765 aa10.81□□□□□ -0.68
SAMM50-206ENST00000494795 RSAD1Q9HA92 442 aa10.81□□□□□ -0.68
SAMM50-206ENST00000494795 INTS9Q9NV88 658 aaKnown RBP10.81□□□□□ -0.68
SAMM50-206ENST00000494795 NUDT5Q9UKK9 219 aa10.81□□□□□ -0.68
SAMM50-206ENST00000494795 KIAA1257Q9ULG3 409 aa10.81□□□□□ -0.68
SAMM50-206ENST00000494795 AP4E1Q9UPM8 1137 aa10.81□□□□□ -0.68
SAMM50-206ENST00000494795 EXOC1LA0A1B0GW35 172 aa10.81□□□□□ -0.68
SAMM50-206ENST00000494795 MCF2LO15068 1137 aa10.81□□□□□ -0.68
SAMM50-206ENST00000494795 BRAFP15056 766 aa10.81□□□□□ -0.68
SAMM50-206ENST00000494795 LIG3P49916 1009 aa10.81□□□□□ -0.68
SAMM50-206ENST00000494795 BCAR1P56945 870 aa10.81□□□□□ -0.68
SAMM50-206ENST00000494795 ROR1Q01973 937 aa10.81□□□□□ -0.68
SAMM50-206ENST00000494795 LPIN1Q14693 890 aa10.81□□□□□ -0.68
SAMM50-206ENST00000494795 ZKSCAN8Q15776 578 aaPredicted RBP10.81□□□□□ -0.68
SAMM50-206ENST00000494795 HIF1AQ16665 826 aa10.81□□□□□ -0.68
SAMM50-206ENST00000494795 MFSD5Q6N075 450 aa10.81□□□□□ -0.68
SAMM50-206ENST00000494795 UNC5BQ8IZJ1 945 aa10.81□□□□□ -0.68
SAMM50-206ENST00000494795 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.81□□□□□ -0.68
SAMM50-206ENST00000494795 ULBP1Q9BZM6 244 aa10.81□□□□□ -0.68
SAMM50-206ENST00000494795 NRDE2Q9H7Z3 1164 aa10.81□□□□□ -0.68
SAMM50-206ENST00000494795 RAB6BQ9NRW1 208 aa10.81□□□□□ -0.68
SAMM50-206ENST00000494795 RANBP2P49792 3224 aaKnown RBP10.81□□□□□ -0.68
SAMM50-206ENST00000494795 EBAG9O00559 213 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 GABRDO14764 452 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 ALOX15BO15296 676 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 SEPT4O43236 478 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 CREB3O43889 395 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 UGT1A9O60656 530 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 THP07101 528 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 VAV1P15498 845 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 ELK3P41970 407 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 SULT1E1P49888 294 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 TKTL1P51854 596 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 CRADDP78560 199 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 MBTPS1Q14703 1052 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 MORF4L2Q15014 288 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 SV2CQ496J9 727 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 TMCO4Q5TGY1 634 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 CCSAPQ6IQ19 270 aaPredicted RBP10.8□□□□□ -0.68
SAMM50-206ENST00000494795 C3orf62Q6ZUJ4 267 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 MICALCLQ6ZW33 695 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 SLC26A9Q7LBE3 791 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 RTN4RL1Q86UN2 441 aaPredicted RBP10.8□□□□□ -0.68
SAMM50-206ENST00000494795 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.8□□□□□ -0.68
SAMM50-206ENST00000494795 DEPDC1BQ8WUY9 529 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 CSPG4P5Q96PW8 444 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 ADAM2Q99965 735 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 DUSP16Q9BY84 665 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 UGT1A7Q9HAW7 530 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 UGT1A10Q9HAW8 530 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 UGT1A8Q9HAW9 530 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 IL1RAPL1Q9NZN1 696 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 SLC17A6Q9P2U8 582 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 Q9Y3F1 56 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 DPYSL4O14531 572 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 B3GAT3O94766 335 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 LRPAP1P30533 357 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 TM4SF4P48230 202 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 TAF2Q6P1X5 1199 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 SCAMP5Q8TAC9 235 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 FBF1Q8TES7 1133 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 CENPIQ92674 756 aaPredicted RBP10.8□□□□□ -0.68
SAMM50-206ENST00000494795 ZNF560Q96MR9 790 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 RABGEF1Q9UJ41 708 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 NUP205Q92621 2012 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 C5orf42Q9H799 3197 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 RASA4BC9J798 803 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 M0QYT0 321 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 APOL1O14791 398 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 RASA4O43374 803 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 NPR3P17342 541 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 FOXN2P32314 431 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 WDR4P57081 412 aaKnown RBP10.8□□□□□ -0.68
SAMM50-206ENST00000494795 CDC42EP1Q00587 391 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 UPP1Q16831 310 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 SDHAF4Q5VUM1 108 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 NCBP2-AS2Q69YL0 99 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 SLC9A4Q6AI14 798 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 KCNT2Q6UVM3 1135 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 ZNF280BQ86YH2 543 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 PPIL6Q8IXY8 311 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 ARFGAP2Q8N6H7 521 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 OR10T2Q8NGX3 314 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 SEC16BQ96JE7 1060 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 B3GALT6Q96L58 329 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 SERPINB12Q96P63 405 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 HNRNPABQ99729 332 aaKnown RBP10.8□□□□□ -0.68
SAMM50-206ENST00000494795 PAIP2Q9BPZ3 127 aaKnown RBP10.8□□□□□ -0.68
SAMM50-206ENST00000494795 ETNK1Q9HBU6 452 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 DTLQ9NZJ0 730 aa10.8□□□□□ -0.68
SAMM50-206ENST00000494795 CXorf49A8MYA2 514 aaPredicted RBP10.79□□□□□ -0.68
SAMM50-206ENST00000494795 MFSD11O43934 449 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 AP1G2O75843 785 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 APRTP07741 180 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 GNAT1P11488 350 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 WARSP23381 471 aaKnown RBP10.79□□□□□ -0.68
SAMM50-206ENST00000494795 BDNFP23560 247 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms