RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 C11orf70Q9BRQ4 267 aa17.63■□□□□ 0.41
RER1-208ENST00000493207 POPDC2Q9HBU9 364 aa17.63■□□□□ 0.41
RER1-208ENST00000493207 MARCH2Q9P0N8 246 aa17.63■□□□□ 0.41
RER1-208ENST00000493207 SFMBT1Q9UHJ3 866 aa17.63■□□□□ 0.41
RER1-208ENST00000493207 STRIP2Q9ULQ0 834 aa17.63■□□□□ 0.41
RER1-208ENST00000493207 NAALADL1Q9UQQ1 740 aa17.63■□□□□ 0.41
RER1-208ENST00000493207 BZW2Q9Y6E2 419 aaKnown RBP17.63■□□□□ 0.41
RER1-208ENST00000493207 COL4A2P08572 1712 aa17.63■□□□□ 0.41
RER1-208ENST00000493207 CAPN9O14815 690 aa17.62■□□□□ 0.41
RER1-208ENST00000493207 SCAMP3O14828 347 aaKnown RBP17.62■□□□□ 0.41
RER1-208ENST00000493207 CHADO15335 359 aa17.62■□□□□ 0.41
RER1-208ENST00000493207 HMBSP08397 361 aa17.62■□□□□ 0.41
RER1-208ENST00000493207 PLEKP08567 350 aaPredicted RBP17.62■□□□□ 0.41
RER1-208ENST00000493207 ALADP13716 330 aa17.62■□□□□ 0.41
RER1-208ENST00000493207 YWHAZP63104 245 aaKnown RBP17.62■□□□□ 0.41
RER1-208ENST00000493207 ARHGAP29Q52LW3 1261 aa17.62■□□□□ 0.41
RER1-208ENST00000493207 EDAQ92838 391 aa17.62■□□□□ 0.41
RER1-208ENST00000493207 IRF7Q92985 503 aa17.62■□□□□ 0.41
RER1-208ENST00000493207 WBP2Q969T9 261 aa17.62■□□□□ 0.41
RER1-208ENST00000493207 ASIC4Q96FT7 647 aa17.62■□□□□ 0.41
RER1-208ENST00000493207 TRIM62Q9BVG3 475 aa17.62■□□□□ 0.41
RER1-208ENST00000493207 SLC2A4RGQ9NR83 387 aa17.62■□□□□ 0.41
RER1-208ENST00000493207 ABHD10Q9NUJ1 306 aa17.62■□□□□ 0.41
RER1-208ENST00000493207 ASNSD1Q9NWL6 643 aa17.62■□□□□ 0.41
RER1-208ENST00000493207 TAS2R14Q9NYV8 317 aa17.62■□□□□ 0.41
RER1-208ENST00000493207 SH3BP1Q9Y3L3 701 aa17.62■□□□□ 0.41
RER1-208ENST00000493207 SLC12A8A0AV02 714 aa17.61■□□□□ 0.41
RER1-208ENST00000493207 TMCO5BA8MYB1 307 aa17.61■□□□□ 0.41
RER1-208ENST00000493207 AKR1B15C9JRZ8 316 aaPredicted RBP17.61■□□□□ 0.41
RER1-208ENST00000493207 PI4K2BG5E9Z4 385 aa17.61■□□□□ 0.41
RER1-208ENST00000493207 GOLGA8SH3BPF8 625 aa17.61■□□□□ 0.41
RER1-208ENST00000493207 MSI1O43347 362 aaKnown RBP17.61■□□□□ 0.41
RER1-208ENST00000493207 HSF2BPO75031 334 aa17.61■□□□□ 0.41
RER1-208ENST00000493207 GLI1P08151 1106 aa17.61■□□□□ 0.41
RER1-208ENST00000493207 HNRNPH3P31942 346 aaKnown RBP17.61■□□□□ 0.41
RER1-208ENST00000493207 TSR1Q2NL82 804 aaKnown RBP17.61■□□□□ 0.41
RER1-208ENST00000493207 FAM102AQ5T9C2 384 aaPredicted RBP17.61■□□□□ 0.41
RER1-208ENST00000493207 SYPL2Q5VXT5 272 aa17.61■□□□□ 0.41
RER1-208ENST00000493207 TRIM68Q6AZZ1 485 aa17.61■□□□□ 0.41
RER1-208ENST00000493207 ACAD10Q6JQN1 1059 aa17.61■□□□□ 0.41
RER1-208ENST00000493207 MSANTD2Q6P1R3 559 aa17.61■□□□□ 0.41
RER1-208ENST00000493207 MON1BQ7L1V2 547 aa17.61■□□□□ 0.41
RER1-208ENST00000493207 SLC26A9Q7LBE3 791 aa17.61■□□□□ 0.41
RER1-208ENST00000493207 PHLDB2Q86SQ0 1253 aa17.61■□□□□ 0.41
RER1-208ENST00000493207 PHF13Q86YI8 300 aaPredicted RBP17.61■□□□□ 0.41
RER1-208ENST00000493207 CNGA4Q8IV77 575 aa17.61■□□□□ 0.41
RER1-208ENST00000493207 OSCP1Q8WVF1 389 aa17.61■□□□□ 0.41
RER1-208ENST00000493207 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.61■□□□□ 0.412e-6■□□□□ 9.4
RER1-208ENST00000493207 DUS2Q9NX74 493 aaKnown RBP17.61■□□□□ 0.41
RER1-208ENST00000493207 ADAM22Q9P0K1 906 aa17.61■□□□□ 0.41
RER1-208ENST00000493207 ARHGAP20Q9P2F6 1191 aa17.61■□□□□ 0.41
RER1-208ENST00000493207 FBXL21Q9UKT6 434 aa17.61■□□□□ 0.41
RER1-208ENST00000493207 WNT6Q9Y6F9 365 aa17.61■□□□□ 0.41
RER1-208ENST00000493207 E2F8A0AVK6 867 aa17.6■□□□□ 0.41
RER1-208ENST00000493207 ARNTLO00327 626 aa17.6■□□□□ 0.41
RER1-208ENST00000493207 DDX3XO00571 662 aaKnown RBP eCLIP17.6■□□□□ 0.417e-51■■■■■ 31.8
RER1-208ENST00000493207 ADCY5O95622 1261 aa17.6■□□□□ 0.41
RER1-208ENST00000493207 CALB1P05937 261 aa17.6■□□□□ 0.41
RER1-208ENST00000493207 IFNAR2P48551 515 aa17.6■□□□□ 0.41
RER1-208ENST00000493207 RNASE9P60153 205 aaKnown RBP17.6■□□□□ 0.41
RER1-208ENST00000493207 COG7P83436 770 aa17.6■□□□□ 0.41
RER1-208ENST00000493207 PFKPQ01813 784 aa17.6■□□□□ 0.41
RER1-208ENST00000493207 TNK2Q07912 1038 aa17.6■□□□□ 0.41
RER1-208ENST00000493207 PTP4A2Q12974 167 aa17.6■□□□□ 0.41
RER1-208ENST00000493207 ARID5BQ14865 1188 aa17.6■□□□□ 0.41
RER1-208ENST00000493207 DCAF6Q58WW2 860 aa17.6■□□□□ 0.41
RER1-208ENST00000493207 WDR59Q6PJI9 974 aa17.6■□□□□ 0.41
RER1-208ENST00000493207 BEND5Q7L4P6 421 aa17.6■□□□□ 0.41
RER1-208ENST00000493207 VPS36Q86VN1 386 aa17.6■□□□□ 0.41
RER1-208ENST00000493207 DEFB106AQ8N104 65 aa17.6■□□□□ 0.41
RER1-208ENST00000493207 TTC8Q8TAM2 541 aa17.6■□□□□ 0.41
RER1-208ENST00000493207 ADAM32Q8TC27 787 aa17.6■□□□□ 0.41
RER1-208ENST00000493207 CSGALNACT1Q8TDX6 532 aa17.6■□□□□ 0.41
RER1-208ENST00000493207 DQX1Q8TE96 717 aaKnown RBP17.6■□□□□ 0.41
RER1-208ENST00000493207 SLC2A13Q96QE2 648 aa17.6■□□□□ 0.41
RER1-208ENST00000493207 FAM83CQ9BQN1 747 aa17.6■□□□□ 0.41
RER1-208ENST00000493207 LINC00597Q9H2U6 94 aa17.6■□□□□ 0.41
RER1-208ENST00000493207 EBF3Q9H4W6 596 aa17.6■□□□□ 0.41
RER1-208ENST00000493207 EPHX3Q9H6B9 360 aa17.6■□□□□ 0.41
RER1-208ENST00000493207 ZNHIT6Q9NWK9 470 aaKnown RBP17.6■□□□□ 0.41
RER1-208ENST00000493207 CA14Q9ULX7 337 aa17.6■□□□□ 0.41
RER1-208ENST00000493207 NCOR1O75376 2440 aa17.6■□□□□ 0.41
RER1-208ENST00000493207 COL4A3Q01955 1670 aa17.59■□□□□ 0.41
RER1-208ENST00000493207 DLL1O00548 723 aa17.59■□□□□ 0.41
RER1-208ENST00000493207 DAB1O75553 588 aa17.59■□□□□ 0.41
RER1-208ENST00000493207 STC2O76061 302 aa17.59■□□□□ 0.41
RER1-208ENST00000493207 ARSAP15289 507 aa17.59■□□□□ 0.41
RER1-208ENST00000493207 SCNN1AP37088 669 aa17.59■□□□□ 0.41
RER1-208ENST00000493207 C1QBPQ07021 282 aaKnown RBP17.59■□□□□ 0.41
RER1-208ENST00000493207 SIGLEC14Q08ET2 396 aa17.59■□□□□ 0.41
RER1-208ENST00000493207 PDGFRLQ15198 375 aa17.59■□□□□ 0.41
RER1-208ENST00000493207 IER5LQ5T953 404 aa17.59■□□□□ 0.41
RER1-208ENST00000493207 TAC4Q86UU9 113 aa17.59■□□□□ 0.41
RER1-208ENST00000493207 DNAAF5Q86Y56 855 aa17.59■□□□□ 0.41
RER1-208ENST00000493207 DRC7Q8IY82 874 aa17.59■□□□□ 0.41
RER1-208ENST00000493207 DNASE1L2Q92874 299 aa17.59■□□□□ 0.41
RER1-208ENST00000493207 METTL5Q9NRN9 209 aaKnown RBP17.59■□□□□ 0.41
RER1-208ENST00000493207 HEBP1Q9NRV9 189 aa17.59■□□□□ 0.41
RER1-208ENST00000493207 GTSE1Q9NYZ3 720 aa17.59■□□□□ 0.41
RER1-208ENST00000493207 ADAMTS1Q9UHI8 967 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms