RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 YWHAZP63104 245 aaKnown RBP14.61□□□□□ -0.07
CCM2-217ENST00000492883 NOMO3P69849 1222 aa14.61□□□□□ -0.07
CCM2-217ENST00000492883 NR1H3Q13133 447 aa14.61□□□□□ -0.07
CCM2-217ENST00000492883 TOGARAM2Q6ZUX3 1019 aa14.61□□□□□ -0.07
CCM2-217ENST00000492883 FAM183BPQ6ZVS7 135 aa14.61□□□□□ -0.07
CCM2-217ENST00000492883 HTR3DQ70Z44 454 aa14.61□□□□□ -0.07
CCM2-217ENST00000492883 BMP8AQ7Z5Y6 402 aa14.61□□□□□ -0.07
CCM2-217ENST00000492883 GAS2L3Q86XJ1 694 aa14.61□□□□□ -0.07
CCM2-217ENST00000492883 ZDHHC17Q8IUH5 632 aa14.61□□□□□ -0.07
CCM2-217ENST00000492883 CPA6Q8N4T0 437 aa14.61□□□□□ -0.07
CCM2-217ENST00000492883 ATP2A3Q93084 1043 aa14.61□□□□□ -0.07
CCM2-217ENST00000492883 WBP2Q969T9 261 aa14.61□□□□□ -0.07
CCM2-217ENST00000492883 PCDHB18PQ96TA0 734 aa14.61□□□□□ -0.07
CCM2-217ENST00000492883 TRIM5Q9C035 493 aa14.61□□□□□ -0.07
CCM2-217ENST00000492883 ECT2Q9H8V3 914 aa14.61□□□□□ -0.07
CCM2-217ENST00000492883 POPDC2Q9HBU9 364 aa14.61□□□□□ -0.07
CCM2-217ENST00000492883 HPS4Q9NQG7 708 aa14.61□□□□□ -0.07
CCM2-217ENST00000492883 AIPL1Q9NZN9 384 aa14.61□□□□□ -0.07
CCM2-217ENST00000492883 CAPN11Q9UMQ6 739 aa14.61□□□□□ -0.07
CCM2-217ENST00000492883 NAALADL1Q9UQQ1 740 aa14.61□□□□□ -0.07
CCM2-217ENST00000492883 LUC7L2Q9Y383 392 aaKnown RBP14.61□□□□□ -0.07
CCM2-217ENST00000492883 ITIH6Q6UXX5 1313 aa14.61□□□□□ -0.07
CCM2-217ENST00000492883 PTPRDP23468 1912 aa14.6□□□□□ -0.07
CCM2-217ENST00000492883 MAN2B1O00754 1011 aa14.6□□□□□ -0.07
CCM2-217ENST00000492883 STC2O76061 302 aa14.6□□□□□ -0.07
CCM2-217ENST00000492883 NFATC1O95644 943 aa14.6□□□□□ -0.07
CCM2-217ENST00000492883 GLI1P08151 1106 aa14.6□□□□□ -0.07
CCM2-217ENST00000492883 GLULP15104 373 aa14.6□□□□□ -0.07
CCM2-217ENST00000492883 CD72P21854 359 aa14.6□□□□□ -0.07
CCM2-217ENST00000492883 NSFP46459 744 aaKnown RBP14.6□□□□□ -0.07
CCM2-217ENST00000492883 SOX9P48436 509 aa14.6□□□□□ -0.07
CCM2-217ENST00000492883 ZBED6P86452 979 aa14.6□□□□□ -0.07
CCM2-217ENST00000492883 AMPD2Q01433 879 aa14.6□□□□□ -0.07
CCM2-217ENST00000492883 SLC6A3Q01959 620 aa14.6□□□□□ -0.07
CCM2-217ENST00000492883 KLHL30Q0D2K2 578 aa14.6□□□□□ -0.07
CCM2-217ENST00000492883 TAF5Q15542 800 aa14.6□□□□□ -0.07
CCM2-217ENST00000492883 EML3Q32P44 896 aa14.6□□□□□ -0.07
CCM2-217ENST00000492883 SPECC1LQ69YQ0 1117 aa14.6□□□□□ -0.07
CCM2-217ENST00000492883 ZNF852Q6ZMS4 543 aa14.6□□□□□ -0.07
CCM2-217ENST00000492883 BBS7Q8IWZ6 715 aa14.6□□□□□ -0.07
CCM2-217ENST00000492883 SUGP1Q8IWZ8 645 aaKnown RBP14.6□□□□□ -0.07
CCM2-217ENST00000492883 ADGRG2Q8IZP9 1017 aa14.6□□□□□ -0.07
CCM2-217ENST00000492883 SLC30A5Q8TAD4 765 aa14.6□□□□□ -0.07
CCM2-217ENST00000492883 LRFN3Q9BTN0 628 aa14.6□□□□□ -0.07
CCM2-217ENST00000492883 HAUS4Q9H6D7 363 aa14.6□□□□□ -0.07
CCM2-217ENST00000492883 TBC1D17Q9HA65 648 aa14.6□□□□□ -0.07
CCM2-217ENST00000492883 MRPS17Q9Y2R5 130 aaKnown RBP14.6□□□□□ -0.07
CCM2-217ENST00000492883 HBS1LQ9Y450 684 aaKnown RBP14.6□□□□□ -0.07
CCM2-217ENST00000492883 KANSL1LA0AUZ9 987 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 OTOL1A6NHN0 477 aaPredicted RBP14.59□□□□□ -0.07
CCM2-217ENST00000492883 SPECC1L-ADORA2AF8WAN1 911 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 HSF2BPO75031 334 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 GRAP2O75791 330 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 FYNP06241 537 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 TPM1P09493 284 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 SKILP12757 684 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 UNGP13051 313 aaPredicted RBP14.59□□□□□ -0.07
CCM2-217ENST00000492883 CASP14P31944 242 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 GABRB2P47870 512 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 HARS2P49590 506 aaKnown RBP14.59□□□□□ -0.07
CCM2-217ENST00000492883 MLLT6P55198 1093 aaPredicted RBP14.59□□□□□ -0.07
CCM2-217ENST00000492883 RNASE9P60153 205 aaKnown RBP14.59□□□□□ -0.07
CCM2-217ENST00000492883 CLEC16AQ2KHT3 1053 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 C2CD6Q53TS8 623 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 DCAF6Q58WW2 860 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 SYPL2Q5VXT5 272 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 MSANTD2Q6P1R3 559 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 SARM1Q6SZW1 724 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 OLFML1Q6UWY5 402 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 MMS22LQ6ZRQ5 1243 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 BEND5Q7L4P6 421 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 RALGPS2Q86X27 583 aaPredicted RBP14.59□□□□□ -0.07
CCM2-217ENST00000492883 DEFB106AQ8N104 65 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 FBXL6Q8N531 539 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 FAM3CQ92520 227 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 PLD4Q96BZ4 506 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 OTUB2Q96DC9 234 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 MSANTD3Q96H12 275 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 PIWIL1Q96J94 861 aaKnown RBP14.59□□□□□ -0.07
CCM2-217ENST00000492883 NELL2Q99435 816 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 DCLK3Q9C098 648 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 ASNSD1Q9NWL6 643 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 ZNF510Q9Y2H8 683 aa14.59□□□□□ -0.07
CCM2-217ENST00000492883 FAM170BA6NMN3 283 aa14.58□□□□□ -0.08
CCM2-217ENST00000492883 GOLGA8SH3BPF8 625 aa14.58□□□□□ -0.08
CCM2-217ENST00000492883 MSI1O43347 362 aaKnown RBP14.58□□□□□ -0.08
CCM2-217ENST00000492883 GYPCP04921 128 aa14.58□□□□□ -0.08
CCM2-217ENST00000492883 MMP8P22894 467 aa14.58□□□□□ -0.08
CCM2-217ENST00000492883 CORO1AP31146 461 aaKnown RBP14.58□□□□□ -0.08
CCM2-217ENST00000492883 CTHP32929 405 aa14.58□□□□□ -0.08
CCM2-217ENST00000492883 PRKCIP41743 596 aa14.58□□□□□ -0.08
CCM2-217ENST00000492883 CLCN5P51795 746 aa14.58□□□□□ -0.08
CCM2-217ENST00000492883 CDK17Q00537 523 aa14.58□□□□□ -0.08
CCM2-217ENST00000492883 TRIM14Q14142 442 aa14.58□□□□□ -0.08
CCM2-217ENST00000492883 UBXN2BQ14CS0 331 aa14.58□□□□□ -0.08
CCM2-217ENST00000492883 DHCR24Q15392 516 aa14.58□□□□□ -0.08
CCM2-217ENST00000492883 FAM102AQ5T9C2 384 aaPredicted RBP14.58□□□□□ -0.08
CCM2-217ENST00000492883 C1orf228Q6PIY5 440 aa14.58□□□□□ -0.08
CCM2-217ENST00000492883 XYLT1Q86Y38 959 aa14.58□□□□□ -0.08
CCM2-217ENST00000492883 DENND1CQ8IV53 801 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms