RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 SERPINF1P36955 418 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 GATMP50440 423 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 PGDP52209 483 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 PNLIPRP1P54315 467 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 SOX10P56693 466 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 SATB1Q01826 763 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 ICA1Q05084 483 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 MTAPQ13126 283 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 GRM1Q13255 1194 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 ATP1A4Q13733 1029 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 PTK2BQ14289 1009 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 ZACNQ401N2 412 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 INO80DQ53TQ3 878 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 TREML2Q5T2D2 321 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 FAXCQ5TGI0 409 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 ZNF626Q68DY1 528 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 FCRLBQ6BAA4 426 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 MRNIPQ6NTE8 343 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 TLDC1Q6P9B6 456 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 FBXO38Q6PIJ6 1188 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 DPY19L3Q6ZPD9 716 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 PEG10Q86TG7 708 aaKnown RBP3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 KRT73Q86Y46 540 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 MYLK4Q86YV6 388 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 MBD3L2Q8NHZ7 208 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 SUN3Q8TAQ9 357 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 FAM71BQ8TC56 605 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 STT3BQ8TCJ2 826 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 FBXL20Q96IG2 436 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 ZNF48Q96MX3 618 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 RMDN3Q96TC7 470 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 VN1R3Q9BXE9 311 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 MAGEH1Q9H213 219 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 PPCSQ9HAB8 311 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 SLC27A6Q9Y2P4 619 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 PCDHGB3Q9Y5G1 929 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 ENTPD2Q9Y5L3 495 aa3.42□□□□□ -1.86
HMGB1P30-201ENST00000492455 TP73O15350 636 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 SPRY2O43597 315 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 TLR5O60602 858 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 SKAP2O75563 359 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 PRR35P0CG20 571 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 NPPBP16860 134 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 KELP23276 732 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 EPHA3P29320 983 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 MCM5P33992 734 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 HALP42357 657 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 FOXG1P55316 489 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 NSUN2Q08J23 767 aaKnown RBP eCLIP3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 GPS1Q13098 491 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 BLMHQ13867 455 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 ELF2Q15723 593 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 ETFDHQ16134 617 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 CCDC38Q502W7 563 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 ZNF618Q5T7W0 954 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 TSTD2Q5T7W7 516 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 JMJD6Q6NYC1 403 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 PGBD2Q6P3X8 592 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 MZT2AQ6P582 158 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 CAND1Q86VP6 1230 aaKnown RBP3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 SUGP1Q8IWZ8 645 aaKnown RBP3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 MYCT1Q8N699 235 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 ATG16L2Q8NAA4 619 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 CCDC150Q8NCX0 1101 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 DENND1AQ8TEH3 1009 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 SMCR8Q8TEV9 937 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 ATRIPQ8WXE1 791 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 EID2BQ96D98 161 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 RSPRY1Q96DX4 576 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 ZNF668Q96K58 619 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 HIST1H2AAQ96QV6 131 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 PRR25Q96S07 402 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 ALG8Q9BVK2 526 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 GLOD4Q9HC38 313 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 AGO4Q9HCK5 861 aaKnown RBP3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 EHD3Q9NZN3 535 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 LPAR3Q9UBY5 353 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 MAGED2Q9UNF1 606 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 SH2B3Q9UQQ2 575 aa3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 FNDC1Q4ZHG4 1894 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 ARID4BQ4LE39 1312 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P30-201ENST00000492455 LINC00473A8K010 186 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 EXOC5O00471 708 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 INSIG1O15503 277 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 COQ9O75208 318 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 TJP3O95049 919 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 NTSR2O95665 410 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 NR2F6P10588 404 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 ZFXP17010 805 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 RBL1P28749 1068 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 GRK6P43250 576 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 PLCD1P51178 756 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 FOXO1Q12778 655 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 RAPGEF1Q13905 1077 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 CLCA4Q14CN2 919 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 ACOX1Q15067 660 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 NBPF8Q3BBV2 869 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 GORABQ5T7V8 394 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 ANO1Q5XXA6 986 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 ARL6IP4Q66PJ3 421 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms