RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 EDF1O60869 148 aaKnown RBP12.93□□□□□ -0.34
HMGN1-220ENST00000492280 NQO1P15559 274 aaKnown RBP12.93□□□□□ -0.34
HMGN1-220ENST00000492280 FBXO47Q5MNV8 452 aa12.93□□□□□ -0.34
HMGN1-220ENST00000492280 OSTM1Q86WC4 334 aa12.93□□□□□ -0.34
HMGN1-220ENST00000492280 SLC4A5Q9BY07 1137 aa12.93□□□□□ -0.34
HMGN1-220ENST00000492280 GCOM2Q9BZD3 368 aaPredicted RBP12.93□□□□□ -0.34
HMGN1-220ENST00000492280 SLC13A1Q9BZW2 595 aa12.93□□□□□ -0.34
HMGN1-220ENST00000492280 NRDE2Q9H7Z3 1164 aa12.93□□□□□ -0.34
HMGN1-220ENST00000492280 MTMR10Q9NXD2 777 aa12.93□□□□□ -0.34
HMGN1-220ENST00000492280 SEPT10Q9P0V9 454 aa12.93□□□□□ -0.34
HMGN1-220ENST00000492280 SLC24A2Q9UI40 661 aa12.93□□□□□ -0.34
HMGN1-220ENST00000492280 SHROOM3Q8TF72 1996 aa12.93□□□□□ -0.34
HMGN1-220ENST00000492280 GLTPD2A6NH11 291 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 TRIM49D1C9J1S8 452 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 CYB561D2O14569 222 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 LPXNO60711 386 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 AMHP03971 560 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 INHBAP08476 426 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 BGNP21810 368 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 POU5F1BQ06416 359 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 TFDP2Q14188 446 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 ACCSLQ4AC99 568 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 NOTUMQ6P988 496 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 KCNT2Q6UVM3 1135 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 HFE2Q6ZVN8 426 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 VSIG1Q86XK7 387 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 BEST2Q8NFU1 509 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 L3MBTL3Q96JM7 780 aaPredicted RBP12.92□□□□□ -0.34
HMGN1-220ENST00000492280 RXFP1Q9HBX9 757 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 ZC3H7BQ9UGR2 993 aaKnown RBP12.92□□□□□ -0.34
HMGN1-220ENST00000492280 TTLL3Q9Y4R7 772 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 MGRN1O60291 552 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 MT-ND3P03897 115 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 MYL3P08590 195 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 CTSHP09668 335 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 CSH1P0DML2 217 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 CSH2P0DML3 217 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 NEFHP12036 1026 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 VAV1P15498 845 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 L1CAMP32004 1257 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 GBP2P32456 591 aaPredicted RBP12.92□□□□□ -0.34
HMGN1-220ENST00000492280 GNL1P36915 607 aaPredicted RBP12.92□□□□□ -0.34
HMGN1-220ENST00000492280 GRB14Q14449 540 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 PAN2Q504Q3 1202 aaKnown RBP12.92□□□□□ -0.34
HMGN1-220ENST00000492280 TLK2Q86UE8 772 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 BANPQ8N9N5 519 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 CYTH2Q99418 400 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 RHOBTB2Q9BYZ6 727 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 POPDC2Q9HBU9 364 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 SMG5Q9UPR3 1016 aaKnown RBP12.92□□□□□ -0.34
HMGN1-220ENST00000492280 IKBKGQ9Y6K9 419 aa12.92□□□□□ -0.34
HMGN1-220ENST00000492280 RBM47A0AV96 593 aaKnown RBP12.91□□□□□ -0.34
HMGN1-220ENST00000492280 KPNA7A9QM74 516 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 CREB3O43889 395 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 MYCNP04198 464 aaPredicted RBP12.91□□□□□ -0.34
HMGN1-220ENST00000492280 RARBP10826 455 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 DARSP14868 501 aaKnown RBP12.91□□□□□ -0.34
HMGN1-220ENST00000492280 CYP2B6P20813 491 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 GTF2A2P52657 109 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 NME3Q13232 169 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 SNX17Q15036 470 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 KLHL38Q2WGJ6 581 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 DCAF4L1Q3SXM0 396 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 DCAF6Q58WW2 860 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 CES3Q6UWW8 571 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 CEP128Q6ZU80 1094 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 ZNF534Q76KX8 674 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 TMEM110Q86TL2 294 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 DEFB106AQ8N104 65 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 C10orf82Q8WW14 230 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 DHRS4Q9BTZ2 278 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 ABHD16BQ9H3Z7 469 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 FBXO6Q9NRD1 293 aaPredicted RBP12.91□□□□□ -0.34
HMGN1-220ENST00000492280 KANSL3Q9P2N6 904 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 COL1A2P08123 1366 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 A6NJR5 290 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 MFSD11O43934 449 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 GSTA1P08263 222 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 NR1H3Q13133 447 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 ZBTB6Q15916 424 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 PLEKHH3Q7Z736 793 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 PIGZQ86VD9 579 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 ZNF410Q86VK4 478 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 MAP7D3Q8IWC1 876 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 ZNF276Q8N554 614 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 RNF169Q8NCN4 708 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 LPPQ93052 612 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 UTP4Q969X6 686 aaKnown RBP12.91□□□□□ -0.34
HMGN1-220ENST00000492280 EMID1Q96A84 441 aaPredicted RBP12.91□□□□□ -0.34
HMGN1-220ENST00000492280 STAMBPL1Q96FJ0 436 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 CSPG4P5Q96PW8 444 aa12.91□□□□□ -0.34
HMGN1-220ENST00000492280 MARCOQ9UEW3 520 aaPredicted RBP12.91□□□□□ -0.34
HMGN1-220ENST00000492280 SULT1E1P49888 294 aa12.9□□□□□ -0.34
HMGN1-220ENST00000492280 FAM47CQ5HY64 1035 aa12.9□□□□□ -0.34
HMGN1-220ENST00000492280 MROH9Q5TGP6 573 aa12.9□□□□□ -0.34
HMGN1-220ENST00000492280 SYPL2Q5VXT5 272 aa12.9□□□□□ -0.34
HMGN1-220ENST00000492280 SLC9A4Q6AI14 798 aa12.9□□□□□ -0.34
HMGN1-220ENST00000492280 CASC4Q6P4E1 433 aa12.9□□□□□ -0.34
HMGN1-220ENST00000492280 UNC5AQ6ZN44 842 aa12.9□□□□□ -0.34
HMGN1-220ENST00000492280 TTC7BQ86TV6 843 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms