RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 HEMK1Q9Y5R4 338 aaPredicted RBP14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 BOD1L1Q8NFC6 3051 aa14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 LAD1O00515 517 aa14.53□□□□□ -0.08
EXOSC3-207ENST00000490516 JAK2O60674 1132 aa14.53□□□□□ -0.08
EXOSC3-207ENST00000490516 SLC12A3P55017 1021 aa14.53□□□□□ -0.08
EXOSC3-207ENST00000490516 TFAMQ00059 246 aaKnown RBP14.53□□□□□ -0.08
EXOSC3-207ENST00000490516 ARSHQ5FYA8 562 aa14.53□□□□□ -0.08
EXOSC3-207ENST00000490516 KDM7AQ6ZMT4 941 aa14.53□□□□□ -0.08
EXOSC3-207ENST00000490516 ADAT2Q7Z6V5 191 aaKnown RBP14.53□□□□□ -0.08
EXOSC3-207ENST00000490516 EID2Q8N6I1 236 aa14.53□□□□□ -0.08
EXOSC3-207ENST00000490516 TOP6BLQ8N6T0 577 aa14.53□□□□□ -0.08
EXOSC3-207ENST00000490516 SYT2Q8N9I0 419 aaPredicted RBP14.53□□□□□ -0.08
EXOSC3-207ENST00000490516 CXorf38Q8TB03 319 aa14.53□□□□□ -0.08
EXOSC3-207ENST00000490516 BHMTQ93088 406 aa14.53□□□□□ -0.08
EXOSC3-207ENST00000490516 BIRC7Q96CA5 298 aa14.53□□□□□ -0.08
EXOSC3-207ENST00000490516 PCED1BQ96HM7 432 aa14.53□□□□□ -0.08
EXOSC3-207ENST00000490516 FAM117AQ9C073 453 aa14.53□□□□□ -0.08
EXOSC3-207ENST00000490516 PCED1AQ9H1Q7 454 aa14.53□□□□□ -0.08
EXOSC3-207ENST00000490516 IKZF4Q9H2S9 585 aa14.53□□□□□ -0.08
EXOSC3-207ENST00000490516 CCSER2Q9H7U1 834 aa14.53□□□□□ -0.08
EXOSC3-207ENST00000490516 GDAP2Q9NXN4 497 aa14.53□□□□□ -0.08
EXOSC3-207ENST00000490516 CHORDC1Q9UHD1 332 aaPredicted RBP14.53□□□□□ -0.08
EXOSC3-207ENST00000490516 AGO2Q9UKV8 859 aaKnown RBP14.53□□□□□ -0.08
EXOSC3-207ENST00000490516 CLCA2Q9UQC9 943 aa14.53□□□□□ -0.08
EXOSC3-207ENST00000490516 AHCTF1Q8WYP5 2266 aa14.53□□□□□ -0.08
EXOSC3-207ENST00000490516 ARID1BQ8NFD5 2236 aaPredicted RBP14.52□□□□□ -0.08
EXOSC3-207ENST00000490516 TERTO14746 1132 aaKnown RBP14.52□□□□□ -0.09
EXOSC3-207ENST00000490516 KLK10O43240 276 aa14.52□□□□□ -0.09
EXOSC3-207ENST00000490516 PDGFRBP09619 1106 aa14.52□□□□□ -0.09
EXOSC3-207ENST00000490516 IRX6P78412 446 aaPredicted RBP14.52□□□□□ -0.09
EXOSC3-207ENST00000490516 ORC1Q13415 861 aa14.52□□□□□ -0.09
EXOSC3-207ENST00000490516 SHBQ15464 509 aa14.52□□□□□ -0.09
EXOSC3-207ENST00000490516 IL17AQ16552 155 aa14.52□□□□□ -0.09
EXOSC3-207ENST00000490516 C6orf132Q5T0Z8 1188 aa14.52□□□□□ -0.09
EXOSC3-207ENST00000490516 HECTD3Q5T447 861 aa14.52□□□□□ -0.09
EXOSC3-207ENST00000490516 DHX40Q8IX18 779 aaKnown RBP14.52□□□□□ -0.09
EXOSC3-207ENST00000490516 CSGALNACT2Q8N6G5 542 aa14.52□□□□□ -0.09
EXOSC3-207ENST00000490516 KRI1Q8N9T8 703 aaKnown RBP14.52□□□□□ -0.09
EXOSC3-207ENST00000490516 NSUN7Q8NE18 718 aaKnown RBP14.52□□□□□ -0.09
EXOSC3-207ENST00000490516 SNRNP27Q8WVK2 155 aaKnown RBP14.52□□□□□ -0.09
EXOSC3-207ENST00000490516 KBTBD7Q8WVZ9 684 aa14.52□□□□□ -0.09
EXOSC3-207ENST00000490516 C8orf48Q96LL4 319 aa14.52□□□□□ -0.09
EXOSC3-207ENST00000490516 DUSP9Q99956 384 aaKnown RBP14.52□□□□□ -0.09
EXOSC3-207ENST00000490516 PLK2Q9NYY3 685 aa14.52□□□□□ -0.09
EXOSC3-207ENST00000490516 WDR35Q9P2L0 1181 aa14.52□□□□□ -0.09
EXOSC3-207ENST00000490516 THAP10Q9P2Z0 257 aaPredicted RBP14.52□□□□□ -0.09
EXOSC3-207ENST00000490516 CDH9Q9ULB4 789 aa14.52□□□□□ -0.09
EXOSC3-207ENST00000490516 PCDHB1Q9Y5F3 818 aa14.52□□□□□ -0.09
EXOSC3-207ENST00000490516 PTPRJQ12913 1337 aa14.51□□□□□ -0.09
EXOSC3-207ENST00000490516 DFNA5O60443 496 aa14.51□□□□□ -0.09
EXOSC3-207ENST00000490516 SYNCRIPO60506 623 aaKnown RBP14.51□□□□□ -0.09
EXOSC3-207ENST00000490516 GREM1O60565 184 aa14.51□□□□□ -0.09
EXOSC3-207ENST00000490516 FSBPO95073 299 aa14.51□□□□□ -0.09
EXOSC3-207ENST00000490516 IL18RAPO95256 599 aa14.51□□□□□ -0.09
EXOSC3-207ENST00000490516 ITGAVP06756 1048 aa14.51□□□□□ -0.09
EXOSC3-207ENST00000490516 KRT19P08727 400 aa14.51□□□□□ -0.09
EXOSC3-207ENST00000490516 ABCB4P21439 1286 aa14.51□□□□□ -0.09
EXOSC3-207ENST00000490516 YWHAQP27348 245 aa14.51□□□□□ -0.09
EXOSC3-207ENST00000490516 NFKB2Q00653 900 aa14.51□□□□□ -0.09
EXOSC3-207ENST00000490516 INSM1Q01101 510 aaPredicted RBP14.51□□□□□ -0.09
EXOSC3-207ENST00000490516 ENPP2Q13822 863 aa14.51□□□□□ -0.09
EXOSC3-207ENST00000490516 NT5DC4Q86YG4 428 aa14.51□□□□□ -0.09
EXOSC3-207ENST00000490516 MYCT1Q8N699 235 aa14.51□□□□□ -0.09
EXOSC3-207ENST00000490516 LRRC52Q8N7C0 313 aa14.51□□□□□ -0.09
EXOSC3-207ENST00000490516 DCBLD1Q8N8Z6 715 aa14.51□□□□□ -0.09
EXOSC3-207ENST00000490516 SAP25Q8TEE9 199 aa14.51□□□□□ -0.09
EXOSC3-207ENST00000490516 KCNE4Q8WWG9 221 aa14.51□□□□□ -0.09
EXOSC3-207ENST00000490516 FBXO32Q969P5 355 aa14.51□□□□□ -0.09
EXOSC3-207ENST00000490516 P2RY11Q96G91 374 aa14.51□□□□□ -0.09
EXOSC3-207ENST00000490516 ZNF578Q96N58 590 aaPredicted RBP14.51□□□□□ -0.09
EXOSC3-207ENST00000490516 REEP2Q9BRK0 252 aa14.51□□□□□ -0.09
EXOSC3-207ENST00000490516 RAB34Q9BZG1 259 aa14.51□□□□□ -0.09
EXOSC3-207ENST00000490516 MARK1Q9P0L2 795 aa14.51□□□□□ -0.09
EXOSC3-207ENST00000490516 SPTAN1Q13813 2472 aaKnown RBP14.5□□□□□ -0.09
EXOSC3-207ENST00000490516 REC8O95072 547 aa14.5□□□□□ -0.09
EXOSC3-207ENST00000490516 MPOP05164 745 aa14.5□□□□□ -0.09
EXOSC3-207ENST00000490516 PLA2G4BP0C869 781 aa14.5□□□□□ -0.09
EXOSC3-207ENST00000490516 GP1BBP13224 206 aa14.5□□□□□ -0.09
EXOSC3-207ENST00000490516 ACO1P21399 889 aaKnown RBP14.5□□□□□ -0.09
EXOSC3-207ENST00000490516 PRKCHP24723 683 aa14.5□□□□□ -0.09
EXOSC3-207ENST00000490516 CD27P26842 260 aa14.5□□□□□ -0.09
EXOSC3-207ENST00000490516 C21orf59P57076 290 aa14.5□□□□□ -0.09
EXOSC3-207ENST00000490516 MAPRE1Q15691 268 aaKnown RBP14.5□□□□□ -0.09
EXOSC3-207ENST00000490516 MDH1BQ5I0G3 518 aa14.5□□□□□ -0.09
EXOSC3-207ENST00000490516 ZNF574Q6ZN55 896 aaPredicted RBP14.5□□□□□ -0.09
EXOSC3-207ENST00000490516 HTR3DQ70Z44 454 aa14.5□□□□□ -0.09
EXOSC3-207ENST00000490516 HS2ST1Q7LGA3 356 aa14.5□□□□□ -0.09
EXOSC3-207ENST00000490516 CACTIN-AS1Q8N1I8 211 aa14.5□□□□□ -0.09
EXOSC3-207ENST00000490516 ZSWIM2Q8NEG5 633 aa14.5□□□□□ -0.09
EXOSC3-207ENST00000490516 MYCBPAPQ8TBZ2 947 aa14.5□□□□□ -0.09
EXOSC3-207ENST00000490516 ELF4Q99607 663 aaPredicted RBP14.5□□□□□ -0.09
EXOSC3-207ENST00000490516 ORAI3Q9BRQ5 295 aa14.5□□□□□ -0.09
EXOSC3-207ENST00000490516 SIX4Q9UIU6 781 aa14.5□□□□□ -0.09
EXOSC3-207ENST00000490516 STYXL1Q9Y6J8 313 aa14.5□□□□□ -0.09
EXOSC3-207ENST00000490516 TSPAN3O60637 253 aa14.49□□□□□ -0.09
EXOSC3-207ENST00000490516 SEMA4FO95754 770 aa14.49□□□□□ -0.09
EXOSC3-207ENST00000490516 ZNF132P52740 706 aa14.49□□□□□ -0.09
EXOSC3-207ENST00000490516 CDH8P55286 799 aa14.49□□□□□ -0.09
EXOSC3-207ENST00000490516 GEN1Q17RS7 908 aa14.49□□□□□ -0.09
EXOSC3-207ENST00000490516 SLFN12LQ6IEE8 588 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms