RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 DGKGP49619 791 aa14.75□□□□□ -0.05
VARS-227ENST00000489979 SCARA5Q6ZMJ2 495 aa14.75□□□□□ -0.05
VARS-227ENST00000489979 EPM2AIP1Q7L775 607 aaPredicted RBP14.75□□□□□ -0.05
VARS-227ENST00000489979 GLRX5Q86SX6 157 aa14.75□□□□□ -0.05
VARS-227ENST00000489979 FUKQ8N0W3 1084 aa14.75□□□□□ -0.05
VARS-227ENST00000489979 ZCCHC9Q8N567 271 aaKnown RBP14.75□□□□□ -0.05
VARS-227ENST00000489979 XXYLT1Q8NBI6 393 aa14.75□□□□□ -0.05
VARS-227ENST00000489979 ZMIZ2Q8NF64 920 aa14.75□□□□□ -0.05
VARS-227ENST00000489979 ZNF507Q8TCN5 953 aa14.75□□□□□ -0.05
VARS-227ENST00000489979 BHMTQ93088 406 aa14.75□□□□□ -0.05
VARS-227ENST00000489979 ELMO3Q96BJ8 720 aa14.75□□□□□ -0.05
VARS-227ENST00000489979 TNIP3Q96KP6 325 aa14.75□□□□□ -0.05
VARS-227ENST00000489979 SMOQ99835 787 aa14.75□□□□□ -0.05
VARS-227ENST00000489979 GPR174Q9BXC1 333 aa14.75□□□□□ -0.05
VARS-227ENST00000489979 MIR1-1HGQ9H1L0 117 aa14.75□□□□□ -0.05
VARS-227ENST00000489979 TNMDQ9H2S6 317 aa14.75□□□□□ -0.05
VARS-227ENST00000489979 IL21RQ9HBE5 538 aa14.75□□□□□ -0.05
VARS-227ENST00000489979 TLR8Q9NR97 1041 aaKnown RBP14.75□□□□□ -0.05
VARS-227ENST00000489979 WSB2Q9NYS7 404 aaPredicted RBP14.75□□□□□ -0.05
VARS-227ENST00000489979 LSM7Q9UK45 103 aaKnown RBP14.75□□□□□ -0.05
VARS-227ENST00000489979 KNL1Q8NG31 2342 aa14.75□□□□□ -0.05
VARS-227ENST00000489979 GCN1Q92616 2671 aaKnown RBP14.74□□□□□ -0.05
VARS-227ENST00000489979 PHACTR2O75167 634 aa14.74□□□□□ -0.05
VARS-227ENST00000489979 CCDC130P13994 396 aa14.74□□□□□ -0.05
VARS-227ENST00000489979 CASP4P49662 377 aa14.74□□□□□ -0.05
VARS-227ENST00000489979 MAP3K7CLP57077 242 aa14.74□□□□□ -0.05
VARS-227ENST00000489979 GOLGA8FQ08AF8 430 aa14.74□□□□□ -0.05
VARS-227ENST00000489979 GOLGA8DPQ0D2H9 430 aa14.74□□□□□ -0.05
VARS-227ENST00000489979 ZNF699Q32M78 642 aa14.74□□□□□ -0.05
VARS-227ENST00000489979 FUT11Q495W5 492 aa14.74□□□□□ -0.05
VARS-227ENST00000489979 ACOT1Q86TX2 421 aa14.74□□□□□ -0.05
VARS-227ENST00000489979 METTL3Q86U44 580 aaKnown RBP14.74□□□□□ -0.05
VARS-227ENST00000489979 NELFCDQ8IXH7 590 aa14.74□□□□□ -0.05
VARS-227ENST00000489979 SDCBP2Q9H190 292 aa14.74□□□□□ -0.05
VARS-227ENST00000489979 FBXO44Q9H4M3 255 aa14.74□□□□□ -0.05
VARS-227ENST00000489979 GAREM1Q9H706 876 aa14.74□□□□□ -0.05
VARS-227ENST00000489979 VRTNQ9H8Y1 702 aa14.74□□□□□ -0.05
VARS-227ENST00000489979 PRDM16Q9HAZ2 1276 aa14.74□□□□□ -0.05
VARS-227ENST00000489979 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.74□□□□□ -0.05
VARS-227ENST00000489979 OSER1Q9NX31 292 aa14.74□□□□□ -0.05
VARS-227ENST00000489979 PLK2Q9NYY3 685 aa14.74□□□□□ -0.05
VARS-227ENST00000489979 KIAA1522Q9P206 1035 aaPredicted RBP14.74□□□□□ -0.05
VARS-227ENST00000489979 USP36Q9P275 1121 aaKnown RBP14.74□□□□□ -0.05
VARS-227ENST00000489979 STON1Q9Y6Q2 735 aa14.74□□□□□ -0.05
VARS-227ENST00000489979 ASXL3Q9C0F0 2248 aa14.74□□□□□ -0.05
VARS-227ENST00000489979 CABIN1Q9Y6J0 2220 aa14.73□□□□□ -0.05
VARS-227ENST00000489979 KCNJ18B7U540 433 aa14.73□□□□□ -0.05
VARS-227ENST00000489979 MDM4O15151 490 aa14.73□□□□□ -0.05
VARS-227ENST00000489979 ATP5C1P36542 298 aaKnown RBP14.73□□□□□ -0.05
VARS-227ENST00000489979 ASIC1P78348 528 aa14.73□□□□□ -0.05
VARS-227ENST00000489979 ORC1Q13415 861 aa14.73□□□□□ -0.05
VARS-227ENST00000489979 BIRC3Q13489 604 aa14.73□□□□□ -0.05
VARS-227ENST00000489979 STARD3Q14849 445 aa14.73□□□□□ -0.05
VARS-227ENST00000489979 ZNF667Q5HYK9 610 aa14.73□□□□□ -0.05
VARS-227ENST00000489979 FAM26FQ5R3K3 315 aa14.73□□□□□ -0.05
VARS-227ENST00000489979 DCAF12L1Q5VU92 463 aa14.73□□□□□ -0.05
VARS-227ENST00000489979 TMPRSS7Q7RTY8 843 aa14.73□□□□□ -0.05
VARS-227ENST00000489979 SLC2A14Q8TDB8 520 aa14.73□□□□□ -0.05
VARS-227ENST00000489979 P2RY11Q96G91 374 aa14.73□□□□□ -0.05
VARS-227ENST00000489979 LRIG1Q96JA1 1093 aa14.73□□□□□ -0.05
VARS-227ENST00000489979 BBC3Q96PG8 261 aaPredicted RBP14.73□□□□□ -0.05
VARS-227ENST00000489979 LRRC27Q9C0I9 530 aa14.73□□□□□ -0.05
VARS-227ENST00000489979 MKRN2Q9H000 416 aaKnown RBP14.73□□□□□ -0.05
VARS-227ENST00000489979 CYLDQ9NQC7 956 aa14.73□□□□□ -0.05
VARS-227ENST00000489979 ITM2CQ9NQX7 267 aa14.73□□□□□ -0.05
VARS-227ENST00000489979 TM7SF3Q9NS93 570 aa14.73□□□□□ -0.05
VARS-227ENST00000489979 FNDC3AQ9Y2H6 1198 aaKnown RBP14.73□□□□□ -0.05
VARS-227ENST00000489979 NFE2L3Q9Y4A8 694 aa14.73□□□□□ -0.05
VARS-227ENST00000489979 BCAT2O15382 392 aaPredicted RBP14.72□□□□□ -0.05
VARS-227ENST00000489979 CYP26A1O43174 497 aa14.72□□□□□ -0.05
VARS-227ENST00000489979 CILPO75339 1184 aa14.72□□□□□ -0.05
VARS-227ENST00000489979 CER1O95813 267 aa14.72□□□□□ -0.05
VARS-227ENST00000489979 ZNF883P0CG24 379 aa14.72□□□□□ -0.05
VARS-227ENST00000489979 MATKP42679 507 aa14.72□□□□□ -0.05
VARS-227ENST00000489979 IL12RB1P42701 662 aa14.72□□□□□ -0.05
VARS-227ENST00000489979 TPMTP51580 245 aa14.72□□□□□ -0.05
VARS-227ENST00000489979 BNC1Q01954 994 aa14.72□□□□□ -0.05
VARS-227ENST00000489979 SLC39A14Q15043 492 aa14.72□□□□□ -0.05
VARS-227ENST00000489979 HLA-BQ31612 363 aa14.72□□□□□ -0.05
VARS-227ENST00000489979 ERICH6BQ5W0A0 696 aa14.72□□□□□ -0.05
VARS-227ENST00000489979 GPRIN1Q7Z2K8 1008 aa14.72□□□□□ -0.05
VARS-227ENST00000489979 MARCH9Q86YJ5 346 aa14.72□□□□□ -0.05
VARS-227ENST00000489979 CADM4Q8NFZ8 388 aa14.72□□□□□ -0.05
VARS-227ENST00000489979 BAHD1Q8TBE0 780 aaPredicted RBP14.72□□□□□ -0.05
VARS-227ENST00000489979 PLEKHO2Q8TD55 490 aa14.72□□□□□ -0.05
VARS-227ENST00000489979 USP28Q96RU2 1077 aa14.72□□□□□ -0.05
VARS-227ENST00000489979 CSNK1G1Q9HCP0 422 aa14.72□□□□□ -0.05
VARS-227ENST00000489979 SCUBE2Q9NQ36 999 aa14.72□□□□□ -0.05
VARS-227ENST00000489979 KBTBD4Q9NVX7 518 aa14.72□□□□□ -0.05
VARS-227ENST00000489979 TOR4AQ9NXH8 423 aa14.72□□□□□ -0.05
VARS-227ENST00000489979 FBXO10Q9UK96 956 aa14.72□□□□□ -0.05
VARS-227ENST00000489979 NUDT5Q9UKK9 219 aa14.72□□□□□ -0.05
VARS-227ENST00000489979 SCML2Q9UQR0 700 aa14.72□□□□□ -0.05
VARS-227ENST00000489979 MORC2Q9Y6X9 1032 aaPredicted RBP14.72□□□□□ -0.05
VARS-227ENST00000489979 UBE4BO95155 1302 aa14.71□□□□□ -0.05
VARS-227ENST00000489979 GOLGA8CPA6NN73 597 aa14.71□□□□□ -0.05
VARS-227ENST00000489979 METTL12A8MUP2 240 aa14.71□□□□□ -0.05
VARS-227ENST00000489979 ATXN1LP0C7T5 689 aaKnown RBP14.71□□□□□ -0.05
VARS-227ENST00000489979 PDCP20941 246 aa14.71□□□□□ -0.05
VARS-227ENST00000489979 OXTRP30559 389 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms