RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 EPG5Q9HCE0 2579 aa20.43■□□□□ 0.86
TNFRSF1B-202ENST00000489921 CEP192Q8TEP8 1941 aa20.43■□□□□ 0.86
TNFRSF1B-202ENST00000489921 ACACBO00763 2458 aa20.43■□□□□ 0.86
TNFRSF1B-202ENST00000489921 TRIM49BA6NDI0 452 aa20.42■□□□□ 0.86
TNFRSF1B-202ENST00000489921 PRRT4C9JH25 899 aa20.42■□□□□ 0.86
TNFRSF1B-202ENST00000489921 NEDD8-MDP1E9PL57 170 aa20.42■□□□□ 0.86
TNFRSF1B-202ENST00000489921 SLC16A3O15427 465 aaKnown RBP20.42■□□□□ 0.86
TNFRSF1B-202ENST00000489921 STC2O76061 302 aa20.42■□□□□ 0.86
TNFRSF1B-202ENST00000489921 CAVIN2O95810 425 aa20.42■□□□□ 0.86
TNFRSF1B-202ENST00000489921 CISD3P0C7P0 127 aa20.42■□□□□ 0.86
TNFRSF1B-202ENST00000489921 TYRP14679 529 aa20.42■□□□□ 0.86
TNFRSF1B-202ENST00000489921 TRIM21P19474 475 aaKnown RBP20.42■□□□□ 0.86
TNFRSF1B-202ENST00000489921 PLA2G4AP47712 749 aa20.42■□□□□ 0.86
TNFRSF1B-202ENST00000489921 MAP7D1Q3KQU3 841 aa20.42■□□□□ 0.86
TNFRSF1B-202ENST00000489921 C10orf76Q5T2E6 689 aa20.42■□□□□ 0.86
TNFRSF1B-202ENST00000489921 ARHGAP17Q68EM7 881 aa20.42■□□□□ 0.86
TNFRSF1B-202ENST00000489921 TPGS1Q6ZTW0 290 aa20.42■□□□□ 0.86
TNFRSF1B-202ENST00000489921 TOGARAM2Q6ZUX3 1019 aa20.42■□□□□ 0.86
TNFRSF1B-202ENST00000489921 TTC30AQ86WT1 665 aa20.42■□□□□ 0.86
TNFRSF1B-202ENST00000489921 ZNF513Q8N8E2 541 aaPredicted RBP20.42■□□□□ 0.86
TNFRSF1B-202ENST00000489921 CLIC5Q9NZA1 410 aa20.42■□□□□ 0.86
TNFRSF1B-202ENST00000489921 NAGPAQ9UK23 515 aa20.42■□□□□ 0.86
TNFRSF1B-202ENST00000489921 FBXO10Q9UK96 956 aa20.42■□□□□ 0.86
TNFRSF1B-202ENST00000489921 TPRP12270 2363 aaKnown RBP20.42■□□□□ 0.86
TNFRSF1B-202ENST00000489921 A0A1W2PQF6 199 aa20.41■□□□□ 0.86
TNFRSF1B-202ENST00000489921 TULP2O00295 520 aa20.41■□□□□ 0.86
TNFRSF1B-202ENST00000489921 STX10O60499 249 aa20.41■□□□□ 0.86
TNFRSF1B-202ENST00000489921 ALDH1A2O94788 518 aa20.41■□□□□ 0.86
TNFRSF1B-202ENST00000489921 PSEN1P49768 467 aa20.41■□□□□ 0.86
TNFRSF1B-202ENST00000489921 FKBP3Q00688 224 aaKnown RBP20.41■□□□□ 0.86
TNFRSF1B-202ENST00000489921 C10orf120Q5SQS8 335 aa20.41■□□□□ 0.86
TNFRSF1B-202ENST00000489921 BHLHA9Q7RTU4 235 aa20.41■□□□□ 0.86
TNFRSF1B-202ENST00000489921 PIGZQ86VD9 579 aa20.41■□□□□ 0.86
TNFRSF1B-202ENST00000489921 C11orf74Q86VG3 221 aa20.41■□□□□ 0.86
TNFRSF1B-202ENST00000489921 TTC39CQ8N584 583 aa20.41■□□□□ 0.86
TNFRSF1B-202ENST00000489921 UBR7Q8N806 425 aa20.41■□□□□ 0.86
TNFRSF1B-202ENST00000489921 SLC35C1Q96A29 364 aa20.41■□□□□ 0.86
TNFRSF1B-202ENST00000489921 ACOX2Q99424 681 aa20.41■□□□□ 0.86
TNFRSF1B-202ENST00000489921 BBS2Q9BXC9 721 aa20.41■□□□□ 0.86
TNFRSF1B-202ENST00000489921 FAM124BQ9H5Z6 455 aaPredicted RBP20.41■□□□□ 0.86
TNFRSF1B-202ENST00000489921 POLMQ9NP87 494 aaPredicted RBP20.41■□□□□ 0.86
TNFRSF1B-202ENST00000489921 DNAJC17Q9NVM6 304 aaKnown RBP20.41■□□□□ 0.86
TNFRSF1B-202ENST00000489921 FRYQ5TBA9 3013 aa20.4■□□□□ 0.86
TNFRSF1B-202ENST00000489921 TCRBV21S2A2A0A5A6 115 aa20.4■□□□□ 0.86
TNFRSF1B-202ENST00000489921 CD44P16070 742 aaKnown RBP20.4■□□□□ 0.86
TNFRSF1B-202ENST00000489921 PREPLQ4J6C6 727 aaPredicted RBP20.4■□□□□ 0.86
TNFRSF1B-202ENST00000489921 EGFLAMQ63HQ2 1017 aa20.4■□□□□ 0.86
TNFRSF1B-202ENST00000489921 GRAMD4Q6IC98 578 aa20.4■□□□□ 0.86
TNFRSF1B-202ENST00000489921 ANKRD52Q8NB46 1076 aa20.4■□□□□ 0.86
TNFRSF1B-202ENST00000489921 HMGB4Q8WW32 186 aa20.4■□□□□ 0.86
TNFRSF1B-202ENST00000489921 CCDC34Q96HJ3 373 aa20.4■□□□□ 0.86
TNFRSF1B-202ENST00000489921 TIGD1Q96MW7 591 aa20.4■□□□□ 0.86
TNFRSF1B-202ENST00000489921 CNTNAP3BQ96NU0 1288 aa20.4■□□□□ 0.86
TNFRSF1B-202ENST00000489921 CNTNAP3Q9BZ76 1288 aa20.4■□□□□ 0.86
TNFRSF1B-202ENST00000489921 WDR35Q9P2L0 1181 aa20.4■□□□□ 0.86
TNFRSF1B-202ENST00000489921 LSM7Q9UK45 103 aaKnown RBP20.4■□□□□ 0.86
TNFRSF1B-202ENST00000489921 LNP1A1A4G5 178 aa20.39■□□□□ 0.85
TNFRSF1B-202ENST00000489921 PATE3B3GLJ2 98 aa20.39■□□□□ 0.85
TNFRSF1B-202ENST00000489921 GABRG2P18507 467 aa20.39■□□□□ 0.85
TNFRSF1B-202ENST00000489921 WASP42768 502 aa20.39■□□□□ 0.85
TNFRSF1B-202ENST00000489921 GOLGA8FQ08AF8 430 aa20.39■□□□□ 0.85
TNFRSF1B-202ENST00000489921 GOLGA8DPQ0D2H9 430 aa20.39■□□□□ 0.85
TNFRSF1B-202ENST00000489921 CUL2Q13617 745 aa20.39■□□□□ 0.85
TNFRSF1B-202ENST00000489921 DCAF17Q5H9S7 520 aaPredicted RBP20.39■□□□□ 0.85
TNFRSF1B-202ENST00000489921 TCERG1LQ5VWI1 586 aa20.39■□□□□ 0.85
TNFRSF1B-202ENST00000489921 IL31Q6EBC2 164 aa20.39■□□□□ 0.85
TNFRSF1B-202ENST00000489921 PM20D1Q6GTS8 502 aa20.39■□□□□ 0.85
TNFRSF1B-202ENST00000489921 LSM14BQ9BX40 385 aaKnown RBP20.39■□□□□ 0.85
TNFRSF1B-202ENST00000489921 PLK2Q9NYY3 685 aa20.39■□□□□ 0.85
TNFRSF1B-202ENST00000489921 GON4LQ3T8J9 2241 aa20.38■□□□□ 0.85
TNFRSF1B-202ENST00000489921 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.38■□□□□ 0.85
TNFRSF1B-202ENST00000489921 BMP6P22004 513 aa20.38■□□□□ 0.85
TNFRSF1B-202ENST00000489921 NTSR1P30989 418 aa20.38■□□□□ 0.85
TNFRSF1B-202ENST00000489921 PTGER3P43115 390 aa20.38■□□□□ 0.85
TNFRSF1B-202ENST00000489921 LRRC63Q05C16 580 aa20.38■□□□□ 0.85
TNFRSF1B-202ENST00000489921 FYB2Q5VWT5 728 aa20.38■□□□□ 0.85
TNFRSF1B-202ENST00000489921 RNF43Q68DV7 783 aa20.38■□□□□ 0.85
TNFRSF1B-202ENST00000489921 TMEFF1Q8IYR6 380 aa20.38■□□□□ 0.85
TNFRSF1B-202ENST00000489921 DDX1Q92499 740 aaKnown RBP20.38■□□□□ 0.85
TNFRSF1B-202ENST00000489921 NDRG1Q92597 394 aaKnown RBP20.38■□□□□ 0.85
TNFRSF1B-202ENST00000489921 SMARCE1Q969G3 411 aa20.38■□□□□ 0.85
TNFRSF1B-202ENST00000489921 XPO6Q96QU8 1125 aaKnown RBP20.38■□□□□ 0.85
TNFRSF1B-202ENST00000489921 TSG101Q99816 390 aa20.38■□□□□ 0.85
TNFRSF1B-202ENST00000489921 TMEM74BQ9NUR3 256 aa20.38■□□□□ 0.85
TNFRSF1B-202ENST00000489921 ASPMQ8IZT6 3477 aa20.38■□□□□ 0.85
TNFRSF1B-202ENST00000489921 CDX4O14627 284 aaPredicted RBP20.37■□□□□ 0.85
TNFRSF1B-202ENST00000489921 SMC2O95347 1197 aa20.37■□□□□ 0.85
TNFRSF1B-202ENST00000489921 PENKP01210 267 aaPredicted RBP20.37■□□□□ 0.85
TNFRSF1B-202ENST00000489921 RALAP11233 206 aa20.37■□□□□ 0.85
TNFRSF1B-202ENST00000489921 PI4KAP42356 2102 aa20.37■□□□□ 0.85
TNFRSF1B-202ENST00000489921 DHPSP49366 369 aaPredicted RBP20.37■□□□□ 0.85
TNFRSF1B-202ENST00000489921 NUCB2P80303 420 aa20.37■□□□□ 0.85
TNFRSF1B-202ENST00000489921 PDE4CQ08493 712 aa20.37■□□□□ 0.85
TNFRSF1B-202ENST00000489921 EFEMP1Q12805 493 aa20.37■□□□□ 0.85
TNFRSF1B-202ENST00000489921 ISM2Q6H9L7 571 aa20.37■□□□□ 0.85
TNFRSF1B-202ENST00000489921 KIAA1211LQ6NV74 962 aa20.37■□□□□ 0.85
TNFRSF1B-202ENST00000489921 TRMT11Q7Z4G4 463 aaKnown RBP20.37■□□□□ 0.85
TNFRSF1B-202ENST00000489921 ELOA2Q8IYF1 753 aaPredicted RBP20.37■□□□□ 0.85
TNFRSF1B-202ENST00000489921 BHMTQ93088 406 aa20.37■□□□□ 0.85
TNFRSF1B-202ENST00000489921 CDK5RAP1Q96SZ6 601 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms