RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 ZNF484Q5JVG2 852 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 C16orf46Q6P387 395 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 RFWD3Q6PCD5 774 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 SLC10A4Q96EP9 437 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 SRPK1Q96SB4 655 aaKnown RBP16.3■□□□□ 0.2
BRD9-208ENST00000489816 CYP3A43Q9HB55 503 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 SPTLC1O15269 473 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 RECQL4O94761 1208 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 TROVE2P10155 538 aaKnown RBP eCLIP16.3■□□□□ 0.2
BRD9-208ENST00000489816 SMPD1P17405 629 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 TRIM68Q6AZZ1 485 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 SLC2A14Q8TDB8 520 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 PLCD4Q9BRC7 762 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 FAM167BQ9BTA0 163 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 PLAC1Q9HBJ0 212 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 ARL8BQ9NVJ2 186 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 CLEC11AQ9Y240 323 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 IQANK1A0A1B0GTG1 560 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 CCDC78A2IDD5 438 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 A6NJR5 290 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 ASB14A6NK59 587 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 MAGEB2O15479 319 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 USP12O75317 370 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 SNAI1O95863 264 aaPredicted RBP16.3■□□□□ 0.2
BRD9-208ENST00000489816 NDUFV1P49821 464 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 CLNS1AP54105 237 aaKnown RBP16.3■□□□□ 0.2
BRD9-208ENST00000489816 NME3Q13232 169 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 WLSQ5T9L3 541 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 ALYREFQ86V81 257 aaKnown RBP16.3■□□□□ 0.2
BRD9-208ENST00000489816 CCNYQ8ND76 341 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 SLC44A1Q8WWI5 657 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 AGAP3Q96P47 875 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 MROH8Q9H579 483 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 NRDE2Q9H7Z3 1164 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 TXLNGQ9NUQ3 528 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 MCM8Q9UJA3 840 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 CITO14578 2027 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 SKAP2O75563 359 aaPredicted RBP16.29■□□□□ 0.2
BRD9-208ENST00000489816 MYL2P10916 166 aa16.29■□□□□ 0.2
BRD9-208ENST00000489816 ATICP31939 592 aa16.29■□□□□ 0.2
BRD9-208ENST00000489816 ABCG1P45844 678 aa16.29■□□□□ 0.2
BRD9-208ENST00000489816 CLNKQ7Z7G1 428 aa16.29■□□□□ 0.2
BRD9-208ENST00000489816 FAM13CQ8NE31 585 aa16.29■□□□□ 0.2
BRD9-208ENST00000489816 GPRC5AQ8NFJ5 357 aa16.29■□□□□ 0.2
BRD9-208ENST00000489816 SLC35F5Q8WV83 523 aa16.29■□□□□ 0.2
BRD9-208ENST00000489816 NCAPGQ9BPX3 1015 aa16.29■□□□□ 0.2
BRD9-208ENST00000489816 ITGA11Q9UKX5 1188 aa16.29■□□□□ 0.2
BRD9-208ENST00000489816 PDHXO00330 501 aa16.29■□□□□ 0.2
BRD9-208ENST00000489816 ARFIP2P53365 341 aa16.29■□□□□ 0.2
BRD9-208ENST00000489816 DCAF6Q58WW2 860 aa16.29■□□□□ 0.2
BRD9-208ENST00000489816 UNC5AQ6ZN44 842 aa16.29■□□□□ 0.2
BRD9-208ENST00000489816 DNAJB3Q8WWF6 145 aa16.29■□□□□ 0.2
BRD9-208ENST00000489816 TMEM120AQ9BXJ8 343 aa16.29■□□□□ 0.2
BRD9-208ENST00000489816 TRIM55Q9BYV6 548 aa16.29■□□□□ 0.2
BRD9-208ENST00000489816 KLC2Q9H0B6 622 aa16.29■□□□□ 0.2
BRD9-208ENST00000489816 AP4E1Q9UPM8 1137 aa16.29■□□□□ 0.2
BRD9-208ENST00000489816 PIN4Q9Y237 131 aaKnown RBP16.29■□□□□ 0.2
BRD9-208ENST00000489816 TIMM13Q9Y5L4 95 aaPredicted RBP16.29■□□□□ 0.2
BRD9-208ENST00000489816 DCTN3O75935 186 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 CCNB1P14635 433 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 SERPINB4P48594 390 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 TMPRSS15P98073 1019 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 ACVR2BQ13705 512 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 BOLA3Q53S33 107 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 C9orf131Q5VYM1 1079 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 NME8Q8N427 588 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 PDCD7Q8N8D1 485 aaKnown RBP16.28■□□□□ 0.2
BRD9-208ENST00000489816 TMEM40Q8WWA1 233 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 TBCBQ99426 244 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 DHRS4Q9BTZ2 278 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 PAK5Q9P286 719 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 TTLL3Q9Y4R7 772 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 SIP14410 1827 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 ENDOD1O94919 500 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 INCA1Q0VD86 236 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 AP1B1Q10567 949 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 RCN2Q14257 317 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 CES4AQ5XG92 561 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 ARID3BQ8IVW6 561 aaPredicted RBP16.28■□□□□ 0.2
BRD9-208ENST00000489816 HACE1Q8IYU2 909 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 NDUFAF2Q8N183 169 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 OR6J1Q8NGC5 347 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 CXorf56Q9H5V9 222 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 POPDC2Q9HBU9 364 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 ACSS2Q9NR19 701 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 WDR90Q96KV7 1748 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 SLC15A5A6NIM6 579 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 KCNK1O00180 336 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 ELF1P32519 619 aa16.28■□□□□ 0.2
BRD9-208ENST00000489816 FASTKD5Q7L8L6 764 aaKnown RBP16.28■□□□□ 0.2
BRD9-208ENST00000489816 WDR27A2RRH5 827 aa16.27■□□□□ 0.2
BRD9-208ENST00000489816 BEST1O76090 585 aa16.27■□□□□ 0.2
BRD9-208ENST00000489816 PPIL2Q13356 520 aa16.27■□□□□ 0.2
BRD9-208ENST00000489816 CHI3L2Q15782 390 aa16.27■□□□□ 0.2
BRD9-208ENST00000489816 FAM47CQ5HY64 1035 aa16.27■□□□□ 0.2
BRD9-208ENST00000489816 ANKRD20A3Q5VUR7 823 aa16.27■□□□□ 0.2
BRD9-208ENST00000489816 SLC26A11Q86WA9 606 aa16.27■□□□□ 0.2
BRD9-208ENST00000489816 VPS52Q8N1B4 723 aa16.27■□□□□ 0.2
BRD9-208ENST00000489816 DTX3LQ8TDB6 740 aa16.27■□□□□ 0.2
BRD9-208ENST00000489816 DEPDC1BQ8WUY9 529 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms