RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 PIK3CAP42336 1068 aa12.41□□□□□ -0.42
ACTN4-206ENST00000489451 WASP42768 502 aa12.41□□□□□ -0.42
ACTN4-206ENST00000489451 ANO4Q32M45 955 aa12.41□□□□□ -0.42
ACTN4-206ENST00000489451 ZCWPW2Q504Y3 356 aa12.41□□□□□ -0.42
ACTN4-206ENST00000489451 C10orf76Q5T2E6 689 aa12.41□□□□□ -0.42
ACTN4-206ENST00000489451 SH3PXD2AQ5TCZ1 1133 aa12.41□□□□□ -0.42
ACTN4-206ENST00000489451 CEP135Q66GS9 1140 aa12.41□□□□□ -0.42
ACTN4-206ENST00000489451 KIAA1211LQ6NV74 962 aa12.41□□□□□ -0.42
ACTN4-206ENST00000489451 Q6ZNB5 142 aa12.41□□□□□ -0.42
ACTN4-206ENST00000489451 SCD5Q86SK9 330 aa12.41□□□□□ -0.42
ACTN4-206ENST00000489451 ZNF513Q8N8E2 541 aaPredicted RBP12.41□□□□□ -0.42
ACTN4-206ENST00000489451 GATA6Q92908 595 aa12.41□□□□□ -0.42
ACTN4-206ENST00000489451 ERLEC1Q96DZ1 483 aa12.41□□□□□ -0.42
ACTN4-206ENST00000489451 POLMQ9NP87 494 aaPredicted RBP12.41□□□□□ -0.42
ACTN4-206ENST00000489451 MARK1Q9P0L2 795 aa12.41□□□□□ -0.42
ACTN4-206ENST00000489451 CALCOCO1Q9P1Z2 691 aa12.41□□□□□ -0.42
ACTN4-206ENST00000489451 SCML2Q9UQR0 700 aa12.41□□□□□ -0.42
ACTN4-206ENST00000489451 STARD13Q9Y3M8 1113 aa12.41□□□□□ -0.42
ACTN4-206ENST00000489451 DSPP15924 2871 aaKnown RBP12.4□□□□□ -0.42
ACTN4-206ENST00000489451 A0A1W2PQH9 124 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 CYSRT1A8MQ03 144 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 MAPK13O15264 365 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 CILPO75339 1184 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 ALDH1A2O94788 518 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 RHOBTB3O94955 611 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 KLKB1P03952 638 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 CISD3P0C7P0 127 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 FAM200BP0CF97 657 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 TYRP14679 529 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 ITPKAP23677 461 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 GCLMP48507 274 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 VAMP7P51809 220 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 NDUFA8P51970 172 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 MCCD1P59942 119 aaPredicted RBP12.4□□□□□ -0.42
ACTN4-206ENST00000489451 ZNF252P-AS1Q0IIN9 211 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 DPYDQ12882 1025 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 NFIL3Q16649 462 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 TRIM61Q5EBN2 209 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 DEFB119Q8N690 84 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 TAF4BQ92750 862 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 SEMA4DQ92854 862 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 JAKMIP2Q96AA8 810 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 SLC6A17Q9H1V8 727 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 GOLPH3LQ9H4A5 285 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 FBXO44Q9H4M3 255 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 TMEM9BQ9NQ34 198 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 TLR8Q9NR97 1041 aaKnown RBP12.4□□□□□ -0.42
ACTN4-206ENST00000489451 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.4□□□□□ -0.42
ACTN4-206ENST00000489451 DEC1Q9P2X7 70 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 DACH1Q9UI36 760 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 PILRBQ9UKJ0 227 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 MAPK8IP1Q9UQF2 711 aa12.4□□□□□ -0.42
ACTN4-206ENST00000489451 IGHV1OR15-9A0A0B4J2B8 117 aa12.39□□□□□ -0.43
ACTN4-206ENST00000489451 PCNX2A6NKB5 2137 aa12.39□□□□□ -0.43
ACTN4-206ENST00000489451 NEDD8-MDP1E9PL57 170 aa12.39□□□□□ -0.43
ACTN4-206ENST00000489451 CLSTN1O94985 981 aa12.39□□□□□ -0.43
ACTN4-206ENST00000489451 HOXB2P14652 356 aa12.39□□□□□ -0.43
ACTN4-206ENST00000489451 ENGP17813 658 aa12.39□□□□□ -0.43
ACTN4-206ENST00000489451 NDUFV2P19404 249 aa12.39□□□□□ -0.43
ACTN4-206ENST00000489451 CSRP1P21291 193 aaKnown RBP12.39□□□□□ -0.43
ACTN4-206ENST00000489451 ACO1P21399 889 aaKnown RBP12.39□□□□□ -0.43
ACTN4-206ENST00000489451 NR2F2P24468 414 aa12.39□□□□□ -0.43
ACTN4-206ENST00000489451 KIF11P52732 1056 aa12.39□□□□□ -0.43
ACTN4-206ENST00000489451 PPP1R26Q5T8A7 1209 aaPredicted RBP12.39□□□□□ -0.43
ACTN4-206ENST00000489451 GRAMD4Q6IC98 578 aa12.39□□□□□ -0.43
ACTN4-206ENST00000489451 SLC23A3Q6PIS1 610 aa12.39□□□□□ -0.43
ACTN4-206ENST00000489451 TPGS1Q6ZTW0 290 aa12.39□□□□□ -0.43
ACTN4-206ENST00000489451 LPCAT2Q7L5N7 544 aa12.39□□□□□ -0.43
ACTN4-206ENST00000489451 SYT12Q8IV01 421 aa12.39□□□□□ -0.43
ACTN4-206ENST00000489451 SLC41A1Q8IVJ1 513 aa12.39□□□□□ -0.43
ACTN4-206ENST00000489451 DEFB124Q8NES8 71 aa12.39□□□□□ -0.43
ACTN4-206ENST00000489451 KCNV2Q8TDN2 545 aa12.39□□□□□ -0.43
ACTN4-206ENST00000489451 CYFIP2Q96F07 1278 aa12.39□□□□□ -0.43
ACTN4-206ENST00000489451 SPACA7Q96KW9 195 aa12.39□□□□□ -0.43
ACTN4-206ENST00000489451 GABRG3Q99928 467 aa12.39□□□□□ -0.43
ACTN4-206ENST00000489451 BBS2Q9BXC9 721 aa12.39□□□□□ -0.43
ACTN4-206ENST00000489451 PNPLA8Q9NP80 782 aa12.39□□□□□ -0.43
ACTN4-206ENST00000489451 DNAJC17Q9NVM6 304 aaKnown RBP12.39□□□□□ -0.43
ACTN4-206ENST00000489451 BCCIPQ9P287 314 aaKnown RBP eCLIP12.39□□□□□ -0.43
ACTN4-206ENST00000489451 FBXO10Q9UK96 956 aa12.39□□□□□ -0.43
ACTN4-206ENST00000489451 CIZ1Q9ULV3 898 aaPredicted RBP12.39□□□□□ -0.43
ACTN4-206ENST00000489451 RAD54BQ9Y620 910 aa12.39□□□□□ -0.43
ACTN4-206ENST00000489451 USP3Q9Y6I4 520 aa12.39□□□□□ -0.43
ACTN4-206ENST00000489451 MUC22E2RYF6 1773 aaPredicted RBP12.38□□□□□ -0.43
ACTN4-206ENST00000489451 CACNA1EQ15878 2313 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 WASH3PC4AMC7 463 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 CALUO43852 315 aaPredicted RBP12.38□□□□□ -0.43
ACTN4-206ENST00000489451 STC2O76061 302 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 RARGP13631 454 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 P4HA1P13674 534 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 CD58P19256 250 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 NTSR1P30989 418 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 ATP5C1P36542 298 aaKnown RBP12.38□□□□□ -0.43
ACTN4-206ENST00000489451 KRT85P78386 507 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 SPDYCQ5MJ68 293 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 DAB2IPQ5VWQ8 1189 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 LYSMD4Q5XG99 296 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 BTBD8Q5XKL5 378 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 KLHDC10Q6PID8 442 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 BHLHA9Q7RTU4 235 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms