RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 GSTA2P09210 222 aa14.28□□□□□ -0.12
COPS7B-221ENST00000488111 PDGFRBP09619 1106 aa14.28□□□□□ -0.12
COPS7B-221ENST00000488111 LMO2P25791 158 aa14.28□□□□□ -0.12
COPS7B-221ENST00000488111 RPL9P32969 192 aaKnown RBP14.28□□□□□ -0.12
COPS7B-221ENST00000488111 RFC2P35250 354 aa14.28□□□□□ -0.12
COPS7B-221ENST00000488111 BRCC3P46736 316 aa14.28□□□□□ -0.12
COPS7B-221ENST00000488111 HADHBP55084 474 aaKnown RBP14.28□□□□□ -0.12
COPS7B-221ENST00000488111 CUL3Q13618 768 aa14.28□□□□□ -0.12
COPS7B-221ENST00000488111 RNF220Q5VTB9 566 aa14.28□□□□□ -0.12
COPS7B-221ENST00000488111 DSTYKQ6XUX3 929 aa14.28□□□□□ -0.12
COPS7B-221ENST00000488111 ARHGEF18Q6ZSZ5 1173 aa14.28□□□□□ -0.12
COPS7B-221ENST00000488111 ARHGAP22Q7Z5H3 698 aa14.28□□□□□ -0.12
COPS7B-221ENST00000488111 LONP2Q86WA8 852 aa14.28□□□□□ -0.12
COPS7B-221ENST00000488111 VSIG1Q86XK7 387 aa14.28□□□□□ -0.12
COPS7B-221ENST00000488111 C7orf61Q8IZ16 206 aa14.28□□□□□ -0.12
COPS7B-221ENST00000488111 APPL2Q8NEU8 664 aa14.28□□□□□ -0.12
COPS7B-221ENST00000488111 ERP27Q96DN0 273 aa14.28□□□□□ -0.12
COPS7B-221ENST00000488111 TMEM176AQ96HP8 235 aa14.28□□□□□ -0.12
COPS7B-221ENST00000488111 SENP8Q96LD8 212 aa14.28□□□□□ -0.12
COPS7B-221ENST00000488111 HEXIM2Q96MH2 286 aaKnown RBP14.28□□□□□ -0.12
COPS7B-221ENST00000488111 FAM193BQ96PV7 902 aaPredicted RBP14.28□□□□□ -0.12
COPS7B-221ENST00000488111 LPIN3Q9BQK8 851 aa14.28□□□□□ -0.12
COPS7B-221ENST00000488111 TBC1D10AQ9BXI6 508 aa14.28□□□□□ -0.12
COPS7B-221ENST00000488111 GDAP2Q9NXN4 497 aa14.28□□□□□ -0.12
COPS7B-221ENST00000488111 CTTNBP2NLQ9P2B4 639 aa14.28□□□□□ -0.12
COPS7B-221ENST00000488111 CHKBQ9Y259 395 aa14.28□□□□□ -0.12
COPS7B-221ENST00000488111 STARD13Q9Y3M8 1113 aa14.28□□□□□ -0.12
COPS7B-221ENST00000488111 TBKBP1A7MCY6 615 aa14.27□□□□□ -0.12
COPS7B-221ENST00000488111 INPPL1O15357 1258 aa14.27□□□□□ -0.12
COPS7B-221ENST00000488111 SYN1P17600 705 aa14.27□□□□□ -0.12
COPS7B-221ENST00000488111 ABCB4P21439 1286 aa14.27□□□□□ -0.12
COPS7B-221ENST00000488111 TARSP26639 723 aaKnown RBP14.27□□□□□ -0.12
COPS7B-221ENST00000488111 FOXN2P32314 431 aa14.27□□□□□ -0.12
COPS7B-221ENST00000488111 OR1G1P47890 313 aa14.27□□□□□ -0.12
COPS7B-221ENST00000488111 TIGD5Q53EQ6 642 aa14.27□□□□□ -0.12
COPS7B-221ENST00000488111 WSCD1Q658N2 575 aa14.27□□□□□ -0.12
COPS7B-221ENST00000488111 CD300LGQ6UXG3 332 aa14.27□□□□□ -0.12
COPS7B-221ENST00000488111 OTOP2Q7RTS6 562 aa14.27□□□□□ -0.12
COPS7B-221ENST00000488111 C12orf29Q8N999 325 aa14.27□□□□□ -0.12
COPS7B-221ENST00000488111 TTC8Q8TAM2 541 aa14.27□□□□□ -0.12
COPS7B-221ENST00000488111 KBTBD7Q8WVZ9 684 aa14.27□□□□□ -0.12
COPS7B-221ENST00000488111 TLE6Q9H808 572 aa14.27□□□□□ -0.12
COPS7B-221ENST00000488111 LGALS13Q9UHV8 139 aa14.27□□□□□ -0.12
COPS7B-221ENST00000488111 HAO1Q9UJM8 370 aa14.27□□□□□ -0.12
COPS7B-221ENST00000488111 COG5Q9UP83 839 aa14.27□□□□□ -0.12
COPS7B-221ENST00000488111 LRCH1Q9Y2L9 728 aa14.27□□□□□ -0.12
COPS7B-221ENST00000488111 PRG3Q9Y2Y8 225 aaPredicted RBP14.27□□□□□ -0.12
COPS7B-221ENST00000488111 SH3BP1Q9Y3L3 701 aa14.27□□□□□ -0.12
COPS7B-221ENST00000488111 NVLO15381 856 aaKnown RBP14.27□□□□□ -0.13
COPS7B-221ENST00000488111 T-ENOLP0DO92 83 aa14.27□□□□□ -0.13
COPS7B-221ENST00000488111 COILP38432 576 aaPredicted RBP14.27□□□□□ -0.13
COPS7B-221ENST00000488111 DEFB103AP81534 67 aa14.27□□□□□ -0.13
COPS7B-221ENST00000488111 INCA1Q0VD86 236 aa14.27□□□□□ -0.13
COPS7B-221ENST00000488111 DYNC1I2Q13409 638 aaKnown RBP14.27□□□□□ -0.13
COPS7B-221ENST00000488111 SPDYAQ5MJ70 313 aa14.27□□□□□ -0.13
COPS7B-221ENST00000488111 FOXB2Q5VYV0 432 aa14.27□□□□□ -0.13
COPS7B-221ENST00000488111 C11orf63Q6NUN7 778 aa14.27□□□□□ -0.13
COPS7B-221ENST00000488111 ACOT1Q86TX2 421 aa14.27□□□□□ -0.13
COPS7B-221ENST00000488111 COLGALT2Q8IYK4 626 aa14.27□□□□□ -0.13
COPS7B-221ENST00000488111 CPA5Q8WXQ8 436 aa14.27□□□□□ -0.13
COPS7B-221ENST00000488111 BADQ92934 168 aa14.27□□□□□ -0.13
COPS7B-221ENST00000488111 PITPNM3Q9BZ71 974 aa14.27□□□□□ -0.13
COPS7B-221ENST00000488111 DPEP3Q9H4B8 488 aa14.27□□□□□ -0.13
COPS7B-221ENST00000488111 DCLRE1BQ9H816 532 aa14.27□□□□□ -0.13
COPS7B-221ENST00000488111 NMRK1Q9NWW6 199 aa14.27□□□□□ -0.13
COPS7B-221ENST00000488111 KANSL3Q9P2N6 904 aa14.27□□□□□ -0.13
COPS7B-221ENST00000488111 PRKAG2Q9UGJ0 569 aa14.27□□□□□ -0.13
COPS7B-221ENST00000488111 USH1CQ9Y6N9 552 aa14.27□□□□□ -0.13
COPS7B-221ENST00000488111 A8MXQ7 604 aa14.26□□□□□ -0.13
COPS7B-221ENST00000488111 PDLIM1O00151 329 aa14.26□□□□□ -0.13
COPS7B-221ENST00000488111 FTLP02792 175 aaPredicted RBP14.26□□□□□ -0.13
COPS7B-221ENST00000488111 GNL1P36915 607 aaPredicted RBP14.26□□□□□ -0.13
COPS7B-221ENST00000488111 PBX3P40426 434 aa14.26□□□□□ -0.13
COPS7B-221ENST00000488111 DSC1Q08554 894 aa14.26□□□□□ -0.13
COPS7B-221ENST00000488111 MUM1Q2TAK8 710 aa14.26□□□□□ -0.13
COPS7B-221ENST00000488111 PPP1R21Q6ZMI0 780 aa14.26□□□□□ -0.13
COPS7B-221ENST00000488111 OSTM1Q86WC4 334 aa14.26□□□□□ -0.13
COPS7B-221ENST00000488111 CCDC25Q86WR0 208 aa14.26□□□□□ -0.13
COPS7B-221ENST00000488111 NPAS4Q8IUM7 802 aa14.26□□□□□ -0.13
COPS7B-221ENST00000488111 ADGRF2Q8IZF7 708 aa14.26□□□□□ -0.13
COPS7B-221ENST00000488111 PHC3Q8NDX5 983 aa14.26□□□□□ -0.13
COPS7B-221ENST00000488111 UCMAQ8WVF2 138 aa14.26□□□□□ -0.13
COPS7B-221ENST00000488111 DDX27Q96GQ7 796 aaKnown RBP14.26□□□□□ -0.13
COPS7B-221ENST00000488111 NT5C1AQ9BXI3 368 aa14.26□□□□□ -0.13
COPS7B-221ENST00000488111 DENND2DQ9H6A0 471 aaPredicted RBP14.26□□□□□ -0.13
COPS7B-221ENST00000488111 NRDE2Q9H7Z3 1164 aa14.26□□□□□ -0.13
COPS7B-221ENST00000488111 PCMTD2Q9NV79 361 aa14.26□□□□□ -0.13
COPS7B-221ENST00000488111 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.26□□□□□ -0.13
COPS7B-221ENST00000488111 ALG6Q9Y672 507 aa14.26□□□□□ -0.13
COPS7B-221ENST00000488111 ANKRD62A6NC57 917 aa14.26□□□□□ -0.13
COPS7B-221ENST00000488111 TP73O15350 636 aa14.26□□□□□ -0.13
COPS7B-221ENST00000488111 ACSL3O95573 720 aa14.26□□□□□ -0.13
COPS7B-221ENST00000488111 ACAT1P24752 427 aaKnown RBP14.26□□□□□ -0.13
COPS7B-221ENST00000488111 VHLP40337 213 aa14.26□□□□□ -0.13
COPS7B-221ENST00000488111 C2CD6Q53TS8 623 aa14.26□□□□□ -0.13
COPS7B-221ENST00000488111 RHBDF2Q6PJF5 856 aa14.26□□□□□ -0.13
COPS7B-221ENST00000488111 C16orf59Q7L2K0 433 aa14.26□□□□□ -0.13
COPS7B-221ENST00000488111 ZNF677Q86XU0 584 aa14.26□□□□□ -0.13
COPS7B-221ENST00000488111 UBL4BQ8N7F7 174 aa14.26□□□□□ -0.13
COPS7B-221ENST00000488111 KRT35Q92764 455 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms