RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 BLMHQ13867 455 aa4.49□□□□□ -1.69
ECHDC1-217ENST00000488087 SPARCL1Q14515 664 aa4.49□□□□□ -1.69
ECHDC1-217ENST00000488087 ACOX1Q15067 660 aa4.49□□□□□ -1.69
ECHDC1-217ENST00000488087 ZRSR2Q15696 482 aaKnown RBP4.49□□□□□ -1.69
ECHDC1-217ENST00000488087 PFKFB4Q16877 469 aa4.49□□□□□ -1.69
ECHDC1-217ENST00000488087 CCDC38Q502W7 563 aa4.49□□□□□ -1.69
ECHDC1-217ENST00000488087 KIRREL2Q6UWL6 708 aa4.49□□□□□ -1.69
ECHDC1-217ENST00000488087 CTHRC1Q96CG8 243 aa4.49□□□□□ -1.69
ECHDC1-217ENST00000488087 EIF3CQ99613 913 aaKnown RBP4.49□□□□□ -1.69
ECHDC1-217ENST00000488087 TIMP4Q99727 224 aa4.49□□□□□ -1.69
ECHDC1-217ENST00000488087 CIPCQ9C0C6 399 aa4.49□□□□□ -1.69
ECHDC1-217ENST00000488087 SYNPO2LQ9H987 977 aa4.49□□□□□ -1.69
ECHDC1-217ENST00000488087 HELLSQ9NRZ9 838 aa4.49□□□□□ -1.69
ECHDC1-217ENST00000488087 DTNAQ9Y4J8 743 aa4.49□□□□□ -1.69
ECHDC1-217ENST00000488087 WNT6Q9Y6F9 365 aa4.49□□□□□ -1.69
ECHDC1-217ENST00000488087 CA12O43570 354 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 ASNA1O43681 348 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 TCEA3O75764 348 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 JTBO76095 146 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 CSTBP04080 98 aaKnown RBP4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 NPPBP16860 134 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 ZNF37AP17032 561 aaPredicted RBP4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 WT1P19544 449 aaPredicted RBP4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 ADRA1DP25100 572 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 ITPKBP27987 946 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 PDIA3P30101 505 aaKnown RBP4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 MCM5P33992 734 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 PBX1P40424 430 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 GSTM5P46439 218 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 DIO1P49895 249 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 TXNL4AP83876 142 aaKnown RBP4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 COL10A1Q03692 680 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 LMAN2Q12907 356 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 FHL3Q13643 280 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 ZACNQ401N2 412 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 TMEM196Q5HYL7 178 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 FAM83BQ5T0W9 1011 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 CCDC174Q6PII3 467 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 SERPINA13PQ6UXR4 307 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 SFTPA1Q8IWL2 248 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 TERB1Q8NA31 727 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 FAM71BQ8TC56 605 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 STYXQ8WUJ0 223 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 DAZAP1Q96EP5 407 aaKnown RBP4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 BBC3Q96PG8 261 aaPredicted RBP4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 WDR24Q96S15 920 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 MMS19Q96T76 1030 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 MACROD1Q9BQ69 325 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 USP29Q9HBJ7 922 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 PTPRHQ9HD43 1115 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 ALG13Q9NP73 1137 aaKnown RBP4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 ASAP1Q9ULH1 1129 aa4.48□□□□□ -1.69
ECHDC1-217ENST00000488087 PNMA6EA0A0J9YXQ4 647 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 hCG_1642624A0A1W2PR95 340 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 OR2W5A6NFC9 320 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 SMIM22K7EJ46 135 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 NPC1O15118 1278 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 TNFRSF6BO95407 300 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 AKT1P31749 480 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 CHKAP35790 457 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 CLK3P49761 638 aaKnown RBP4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 DGKQP52824 942 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 COPB1P53618 953 aaKnown RBP4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 DEUP1Q05D60 604 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 MTAPQ13126 283 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 CSHL1Q14406 222 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 PDCD2Q16342 344 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 RNASE12Q5GAN4 147 aaKnown RBP4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 ZNF362Q5T0B9 420 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 GRHL2Q6ISB3 625 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 TLDC1Q6P9B6 456 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 TRIM72Q6ZMU5 477 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 PNPLA1Q8N8W4 532 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 BOLLQ8N9W6 283 aaKnown RBP4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 FAM71DQ8N9W8 422 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 SARAFQ96BY9 339 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 HS6ST2Q96MM7 605 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 RMDN3Q96TC7 470 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 NUDT22Q9BRQ3 303 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 THAP7Q9BT49 309 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 PRDM16Q9HAZ2 1276 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 TMEM8AQ9HCN3 771 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 SEMA4GQ9NTN9 838 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 DACT1Q9NYF0 836 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 ADAM21Q9UKJ8 722 aa4.47□□□□□ -1.69
ECHDC1-217ENST00000488087 SPATA31A6Q5VVP1 1343 aa4.46□□□□□ -1.69
ECHDC1-217ENST00000488087 TARM1B6A8C7 271 aa4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 SYT5O00445 386 aa4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 TRIM38O00635 465 aa4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 FCHO1O14526 889 aa4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 ZNF213O14771 459 aa4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 PCDH17O14917 1159 aa4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 GCATO75600 419 aa4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 NTSR2O95665 410 aa4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 IGLV2-14P01704 120 aa4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 RENBPP51606 427 aa4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 ELLP55199 621 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 HOXA4Q00056 320 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 CCDC15Q0P6D6 951 aa4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 GALNT1Q10472 559 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms