RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-218ENST00000487565 PDCL3Q9H2J4 239 aa8.11□□□□□ -1.11
GARNL3-218ENST00000487565 DPEP3Q9H4B8 488 aa8.11□□□□□ -1.11
GARNL3-218ENST00000487565 ENTPD7Q9NQZ7 604 aa8.11□□□□□ -1.11
GARNL3-218ENST00000487565 FAM49BQ9NUQ9 324 aa8.11□□□□□ -1.11
GARNL3-218ENST00000487565 PCMTD2Q9NV79 361 aa8.11□□□□□ -1.11
GARNL3-218ENST00000487565 NOCTQ9UK39 431 aaKnown RBP8.11□□□□□ -1.11
GARNL3-218ENST00000487565 CDH9Q9ULB4 789 aa8.11□□□□□ -1.11
GARNL3-218ENST00000487565 LZTS1Q9Y250 596 aa8.11□□□□□ -1.11
GARNL3-218ENST00000487565 CEP83Q9Y592 693 aa8.11□□□□□ -1.11
GARNL3-218ENST00000487565 BZW2Q9Y6E2 419 aaKnown RBP8.11□□□□□ -1.11
GARNL3-218ENST00000487565 SCN1AP35498 2009 aa8.11□□□□□ -1.11
GARNL3-218ENST00000487565 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.1□□□□□ -1.11
GARNL3-218ENST00000487565 A0A1W2PPC1 479 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 C5orf67F2Z3F1 127 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 M0QYV0 167 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 O00370 1275 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 LPXNO60711 386 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 OAZ2O95190 189 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 CSPG5O95196 566 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 RB1P06400 928 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 CTSBP07858 339 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 VDRP11473 427 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 SKILP12757 684 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 CCDC130P13994 396 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 CYLC1P35663 651 aaPredicted RBP8.1□□□□□ -1.11
GARNL3-218ENST00000487565 EIF4A3P38919 411 aaKnown RBP8.1□□□□□ -1.11
GARNL3-218ENST00000487565 ERVK-21P61565 698 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 CDK17Q00537 523 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 CDR2Q01850 454 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 DSG1Q02413 1049 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 BMS1Q14692 1282 aaKnown RBP8.1□□□□□ -1.11
GARNL3-218ENST00000487565 PTPN14Q15678 1187 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 PRSS55Q6UWB4 352 aaPredicted RBP8.1□□□□□ -1.11
GARNL3-218ENST00000487565 TRIM72Q6ZMU5 477 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 C4orf50Q6ZRC1 276 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 SPRED2Q7Z698 418 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 ZNF677Q86XU0 584 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 ZDHHC13Q8IUH4 622 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 TMTC1Q8IUR5 882 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 DCP1BQ8IZD4 617 aaKnown RBP8.1□□□□□ -1.11
GARNL3-218ENST00000487565 SLC20A1Q8WUM9 679 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 ARNTL2Q8WYA1 636 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 MYLPFQ96A32 169 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 TIFAQ96CG3 184 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 CCDC42Q96M95 316 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 TCF25Q9BQ70 676 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 RTP3Q9BQQ7 232 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 ACBD6Q9BR61 282 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 TRIM56Q9BRZ2 755 aaKnown RBP8.1□□□□□ -1.11
GARNL3-218ENST00000487565 MED10Q9BTT4 135 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 ZCWPW1Q9H0M4 648 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 ZBP1Q9H171 429 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 PRO3102Q9H379 93 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 HAUS4Q9H6D7 363 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 SLC28A3Q9HAS3 691 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 ACP6Q9NPH0 428 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 TLR9Q9NR96 1032 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.1□□□□□ -1.11
GARNL3-218ENST00000487565 MRPL17Q9NRX2 175 aaKnown RBP8.1□□□□□ -1.11
GARNL3-218ENST00000487565 RAD18Q9NS91 495 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 KRT82Q9NSB4 513 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 MTRRQ9UBK8 725 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 HESX1Q9UBX0 185 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 KIAA1257Q9ULG3 409 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 SSX2IPQ9Y2D8 614 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 NME7Q9Y5B8 376 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 BACE2Q9Y5Z0 518 aa8.1□□□□□ -1.11
GARNL3-218ENST00000487565 TNRC18O15417 2968 aaPredicted RBP8.09□□□□□ -1.11
GARNL3-218ENST00000487565 SSU72P8A0A1W2PR75 194 aa8.09□□□□□ -1.11
GARNL3-218ENST00000487565 AKR1B10O60218 316 aa8.09□□□□□ -1.11
GARNL3-218ENST00000487565 ATP2C2O75185 946 aa8.09□□□□□ -1.11
GARNL3-218ENST00000487565 LSM8O95777 96 aaKnown RBP8.09□□□□□ -1.11
GARNL3-218ENST00000487565 EFEMP2O95967 443 aa8.09□□□□□ -1.11
GARNL3-218ENST00000487565 CALCAP01258 141 aa8.09□□□□□ -1.11
GARNL3-218ENST00000487565 MMEP08473 750 aa8.09□□□□□ -1.11
GARNL3-218ENST00000487565 PLEKP08567 350 aaPredicted RBP8.09□□□□□ -1.11
GARNL3-218ENST00000487565 FAM200BP0CF97 657 aa8.09□□□□□ -1.11
GARNL3-218ENST00000487565 CTSAP10619 480 aa8.09□□□□□ -1.11
GARNL3-218ENST00000487565 PTPN1P18031 435 aaKnown RBP8.09□□□□□ -1.11
GARNL3-218ENST00000487565 LMO2P25791 158 aa8.09□□□□□ -1.11
GARNL3-218ENST00000487565 ADORA2BP29275 332 aa8.09□□□□□ -1.11
GARNL3-218ENST00000487565 NDUFV1P49821 464 aa8.09□□□□□ -1.11
GARNL3-218ENST00000487565 KIF11P52732 1056 aa8.09□□□□□ -1.11
GARNL3-218ENST00000487565 BCAT1P54687 386 aa8.09□□□□□ -1.11
GARNL3-218ENST00000487565 ARPP19P56211 112 aa8.09□□□□□ -1.11
GARNL3-218ENST00000487565 SLC8A3P57103 927 aa8.09□□□□□ -1.11
GARNL3-218ENST00000487565 CCZ1BP86790 482 aa8.09□□□□□ -1.11
GARNL3-218ENST00000487565 CCZ1P86791 482 aaPredicted RBP8.09□□□□□ -1.11
GARNL3-218ENST00000487565 CYP27A1Q02318 531 aa8.09□□□□□ -1.11
GARNL3-218ENST00000487565 GPM6BQ13491 265 aa8.09□□□□□ -1.11
GARNL3-218ENST00000487565 MRPL58Q14197 206 aaKnown RBP8.09□□□□□ -1.11
GARNL3-218ENST00000487565 SMC1AQ14683 1233 aaKnown RBP8.09□□□□□ -1.11
GARNL3-218ENST00000487565 NFE2Q16621 373 aaPredicted RBP8.09□□□□□ -1.11
GARNL3-218ENST00000487565 CCDC142Q17RM4 750 aa8.09□□□□□ -1.11
GARNL3-218ENST00000487565 SLC39A12Q504Y0 691 aa8.09□□□□□ -1.11
GARNL3-218ENST00000487565 RPS26P11Q5JNZ5 115 aaPredicted RBP8.09□□□□□ -1.11
GARNL3-218ENST00000487565 PLPP4Q5VZY2 271 aa8.09□□□□□ -1.11
GARNL3-218ENST00000487565 ARHGAP17Q68EM7 881 aa8.09□□□□□ -1.11
GARNL3-218ENST00000487565 WDR59Q6PJI9 974 aa8.09□□□□□ -1.11
GARNL3-218ENST00000487565 TAS1R1Q7RTX1 841 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms