RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 NCAM1P13591 858 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 ARSAP15289 507 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 CASP14P31944 242 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 ZBED6P86452 979 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 KLHL30Q0D2K2 578 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 PDGFRLQ15198 375 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 MLF2Q15773 248 aaPredicted RBP12.39□□□□□ -0.43
HPS4-214ENST00000485842 SLC44A4Q53GD3 710 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 TDRD12Q587J7 1177 aaKnown RBP12.39□□□□□ -0.43
HPS4-214ENST00000485842 SPECC1LQ69YQ0 1117 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 KLHDC10Q6PID8 442 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 SARM1Q6SZW1 724 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 MMS22LQ6ZRQ5 1243 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 TPRG1Q6ZUI0 275 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 TOGARAM2Q6ZUX3 1019 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 IRF2BP2Q7Z5L9 587 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 VSTM4Q8IW00 320 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 ZNF276Q8N554 614 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 SLC30A5Q8TAD4 765 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 OSCP1Q8WVF1 389 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 FAM83CQ9BQN1 747 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 C11orf70Q9BRQ4 267 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 HPS4Q9NQG7 708 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 GTSE1Q9NYZ3 720 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 WNT16Q9UBV4 365 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 SFMBT1Q9UHJ3 866 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 LSM7Q9UK45 103 aaKnown RBP12.39□□□□□ -0.43
HPS4-214ENST00000485842 CAPN11Q9UMQ6 739 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 LUC7L2Q9Y383 392 aaKnown RBP12.39□□□□□ -0.43
HPS4-214ENST00000485842 PIAS3Q9Y6X2 628 aa12.39□□□□□ -0.43
HPS4-214ENST00000485842 E2F8A0AVK6 867 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 ARNTLO00327 626 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 STK25O00506 426 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 TNFAIP3P21580 790 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 NSFP46459 744 aaKnown RBP12.38□□□□□ -0.43
HPS4-214ENST00000485842 SOX9P48436 509 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 KPNA1P52294 538 aaPredicted RBP12.38□□□□□ -0.43
HPS4-214ENST00000485842 YWHAZP63104 245 aaKnown RBP12.38□□□□□ -0.43
HPS4-214ENST00000485842 TRIM14Q14142 442 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 TAF5Q15542 800 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 CLEC16AQ2KHT3 1053 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 EML3Q32P44 896 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 ITPRIPL2Q3MIP1 535 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 EFHC1Q5JVL4 640 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 FAM102AQ5T9C2 384 aaPredicted RBP12.38□□□□□ -0.43
HPS4-214ENST00000485842 MSANTD2Q6P1R3 559 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 OLFML1Q6UWY5 402 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 TMC6Q7Z403 805 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 CPA6Q8N4T0 437 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 FLCNQ8NFG4 579 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 ADAM32Q8TC27 787 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 DQX1Q8TE96 717 aaKnown RBP12.38□□□□□ -0.43
HPS4-214ENST00000485842 ATP2A3Q93084 1043 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 PBXIP1Q96AQ6 731 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 C18orf8Q96DM3 657 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 TRIM62Q9BVG3 475 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 C1QTNF1Q9BXJ1 281 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 LINC00597Q9H2U6 94 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 HAUS4Q9H6D7 363 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 TBC1D17Q9HA65 648 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 C11orf16Q9NQ32 467 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 AIPL1Q9NZN9 384 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 NAALADL1Q9UQQ1 740 aa12.38□□□□□ -0.43
HPS4-214ENST00000485842 TMCO5BA8MYB1 307 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 SLC9A3R1O14745 358 aaPredicted RBP12.37□□□□□ -0.43
HPS4-214ENST00000485842 HSF2BPO75031 334 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 DAB1O75553 588 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 STC2O76061 302 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 NFATC1O95644 943 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 FYNP06241 537 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 TPM1P09493 284 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 UNGP13051 313 aaPredicted RBP12.37□□□□□ -0.43
HPS4-214ENST00000485842 PRKCIP41743 596 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 RNASE9P60153 205 aaKnown RBP12.37□□□□□ -0.43
HPS4-214ENST00000485842 COG7P83436 770 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 SLC6A3Q01959 620 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 CENPCQ03188 943 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 PRKCQQ04759 706 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 RUNX3Q13761 415 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 DCAF6Q58WW2 860 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 TMEM31Q5JXX7 168 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 SYPL2Q5VXT5 272 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 SLC26A9Q7LBE3 791 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 ZNF571Q7Z3V5 609 aaPredicted RBP12.37□□□□□ -0.43
HPS4-214ENST00000485842 PHLDB2Q86SQ0 1253 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 XYLT1Q86Y38 959 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 BBS7Q8IWZ6 715 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 DEFB106AQ8N104 65 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 PLD4Q96BZ4 506 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 NUCKS1Q9H1E3 243 aaKnown RBP12.37□□□□□ -0.43
HPS4-214ENST00000485842 POPDC2Q9HBU9 364 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 TRPV5Q9NQA5 729 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 ASNSD1Q9NWL6 643 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 TBC1D14Q9P2M4 693 aa12.37□□□□□ -0.43
HPS4-214ENST00000485842 SYNJ2BP-COX16A0A087WUM0 186 aa12.36□□□□□ -0.43
HPS4-214ENST00000485842 OTOL1A6NHN0 477 aaPredicted RBP12.36□□□□□ -0.43
HPS4-214ENST00000485842 CYP17A1P05093 508 aa12.36□□□□□ -0.43
HPS4-214ENST00000485842 CALB1P05937 261 aa12.36□□□□□ -0.43
HPS4-214ENST00000485842 GLI1P08151 1106 aa12.36□□□□□ -0.43
HPS4-214ENST00000485842 CD72P21854 359 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms