RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 GABRB2P47870 512 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 GSDMDP57764 484 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 DAOAP59103 153 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 NOMO3P69849 1222 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 FMO1Q01740 532 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 HTR4Q13639 388 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 CLEC16AQ2KHT3 1053 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 PREPLQ4J6C6 727 aaPredicted RBP8.65□□□□□ -1.02
SF3A1-208ENST00000485618 ACBD5Q5T8D3 534 aaPredicted RBP8.65□□□□□ -1.02
SF3A1-208ENST00000485618 ASTLQ6HA08 431 aaPredicted RBP8.65□□□□□ -1.02
SF3A1-208ENST00000485618 ACAD10Q6JQN1 1059 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 ARCQ7LC44 396 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 ASCL5Q7RTU5 278 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 GPRIN1Q7Z2K8 1008 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 TMEM150AQ86TG1 271 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 PHF13Q86YI8 300 aaPredicted RBP8.65□□□□□ -1.02
SF3A1-208ENST00000485618 UNC45BQ8IWX7 931 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 TXLNBQ8N3L3 684 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 SLC44A3Q8N4M1 653 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 SLC20A1Q8WUM9 679 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 ATP2A3Q93084 1043 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 OTUB2Q96DC9 234 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 MSANTD3Q96H12 275 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 ZSWIM3Q96MP5 696 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 SERPINB11Q96P15 392 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 DNAJC7Q99615 494 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 NCAPGQ9BPX3 1015 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 DDX50Q9BQ39 737 aaKnown RBP8.65□□□□□ -1.02
SF3A1-208ENST00000485618 ZSWIM1Q9BR11 485 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 BRD9Q9H8M2 597 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 MRPL47Q9HD33 250 aaKnown RBP8.65□□□□□ -1.02
SF3A1-208ENST00000485618 PARVAQ9NVD7 372 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.65□□□□□ -1.02
SF3A1-208ENST00000485618 LCMT1Q9UIC8 334 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 FBXL21Q9UKT6 434 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 STAP1Q9ULZ2 295 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 HBS1LQ9Y450 684 aaKnown RBP8.65□□□□□ -1.02
SF3A1-208ENST00000485618 NUMBLQ9Y6R0 609 aa8.65□□□□□ -1.02
SF3A1-208ENST00000485618 ZDBF2Q9HCK1 2354 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 SSU72P8A0A1W2PR75 194 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 C2orf78A6NCI8 922 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 PRR23AA6NEV1 266 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 YJEFN3A6XGL0 299 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 E7ENQ6 273 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 PIK3R2O00459 728 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 CHADO15335 359 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 COCHO43405 550 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 ADCY5O95622 1261 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 OLFM2O95897 454 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 CALCAP01258 141 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 FTLP02792 175 aaPredicted RBP8.64□□□□□ -1.03
SF3A1-208ENST00000485618 KRT3P12035 628 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 NOS2P35228 1153 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 VIPR2P41587 438 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 IFNAR2P48551 515 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 SLC11A2P49281 568 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 MLLT6P55198 1093 aaPredicted RBP8.64□□□□□ -1.03
SF3A1-208ENST00000485618 CENPCQ03188 943 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 EFEMP1Q12805 493 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 SPA17Q15506 151 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 C10orf76Q5T2E6 689 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 FAM102AQ5T9C2 384 aaPredicted RBP8.64□□□□□ -1.03
SF3A1-208ENST00000485618 NUGGCQ68CJ6 796 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 TANGO2Q6ICL3 276 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 DCUN1D2Q6PH85 259 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 PARM1Q6UWI2 310 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 NUDT18Q6ZVK8 323 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 SLC26A9Q7LBE3 791 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 SCD5Q86SK9 330 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 MIB1Q86YT6 1006 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 TMTC1Q8IUR5 882 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 WDTC1Q8N5D0 677 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 TTC16Q8NEE8 873 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 FLCNQ8NFG4 579 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 CCDC26Q8TAB7 109 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 SH3RF2Q8TEC5 729 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 DNASE1L2Q92874 299 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 USP13Q92995 863 aaPredicted RBP8.64□□□□□ -1.03
SF3A1-208ENST00000485618 RNF34Q969K3 372 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 PLD4Q96BZ4 506 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 PANX2Q96RD6 677 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 CPXM1Q96SM3 734 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 CYP2S1Q96SQ9 504 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 SELENOOQ9BVL4 669 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 IRX2Q9BZI1 471 aaPredicted RBP8.64□□□□□ -1.03
SF3A1-208ENST00000485618 CCSER2Q9H7U1 834 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 TRPV5Q9NQA5 729 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 SLC2A4RGQ9NR83 387 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 ABHD10Q9NUJ1 306 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 DUS2Q9NX74 493 aaKnown RBP8.64□□□□□ -1.03
SF3A1-208ENST00000485618 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.64□□□□□ -1.03
SF3A1-208ENST00000485618 ADAMTS1Q9UHI8 967 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 RASAL2Q9UJF2 1139 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 MRPS17Q9Y2R5 130 aaKnown RBP8.64□□□□□ -1.03
SF3A1-208ENST00000485618 CPQQ9Y646 472 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 SCINQ9Y6U3 715 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 DENND4AQ7Z401 1863 aa8.64□□□□□ -1.03
SF3A1-208ENST00000485618 DOCK6Q96HP0 2047 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 C2orf16Q68DN1 1984 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 SLC12A8A0AV02 714 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms