RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 SDC4P31431 198 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 ZNF143P52747 638 aaPredicted RBP18.36■□□□□ 0.53
CHMP3-207ENST00000485465 TEAD2Q15562 447 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 CLUL1Q15846 466 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 CCDC14Q49A88 953 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 ARHGAP15Q53QZ3 475 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 C10orf120Q5SQS8 335 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 TXNDC8Q6A555 127 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 MSANTD2Q6P1R3 559 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 TADA2BQ86TJ2 420 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 CCAR2Q8N163 923 aaKnown RBP18.36■□□□□ 0.53
CHMP3-207ENST00000485465 SMRP1Q8NCR6 262 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 ITFG1Q8TB96 612 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 KIAA1524Q8TCG1 905 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 DQX1Q8TE96 717 aaKnown RBP18.36■□□□□ 0.53
CHMP3-207ENST00000485465 NT5C3BQ969T7 300 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 BTBD6Q96KE9 485 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 CALR3Q96L12 384 aaKnown RBP18.36■□□□□ 0.53
CHMP3-207ENST00000485465 RIPOR3Q96MK2 946 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 CFAP57Q96MR6 1250 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 NPY6RQ99463 290 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 TRPC7Q9HCX4 862 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 LZTFL1Q9NQ48 299 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 RRN3Q9NYV6 651 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 NUDT5Q9UKK9 219 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 STAP1Q9ULZ2 295 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 PAXBP1Q9Y5B6 917 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 SZT2Q5T011 3432 aa18.35■□□□□ 0.53
CHMP3-207ENST00000485465 REV3LO60673 3130 aa18.35■□□□□ 0.53
CHMP3-207ENST00000485465 CLUHO75153 1309 aa18.35■□□□□ 0.53
CHMP3-207ENST00000485465 MACROD2A1Z1Q3 448 aa18.35■□□□□ 0.53
CHMP3-207ENST00000485465 SOBPA7XYQ1 873 aa18.35■□□□□ 0.53
CHMP3-207ENST00000485465 H3BQ06 376 aaPredicted RBP18.35■□□□□ 0.53
CHMP3-207ENST00000485465 CCP110O43303 1012 aa18.35■□□□□ 0.53
CHMP3-207ENST00000485465 COCHO43405 550 aa18.35■□□□□ 0.53
CHMP3-207ENST00000485465 BUB1O43683 1085 aa18.35■□□□□ 0.53
CHMP3-207ENST00000485465 CEBPBP17676 345 aa18.35■□□□□ 0.53
CHMP3-207ENST00000485465 PFKLP17858 780 aa18.35■□□□□ 0.53
CHMP3-207ENST00000485465 PSMA2P25787 234 aa18.35■□□□□ 0.53
CHMP3-207ENST00000485465 MTHFRP42898 656 aa18.35■□□□□ 0.53
CHMP3-207ENST00000485465 PTPN9P43378 593 aa18.35■□□□□ 0.53
CHMP3-207ENST00000485465 NAP1L1P55209 391 aaKnown RBP18.35■□□□□ 0.53
CHMP3-207ENST00000485465 ZNF252P-AS1Q0IIN9 211 aa18.35■□□□□ 0.53
CHMP3-207ENST00000485465 SLC25A52Q3SY17 297 aa18.35■□□□□ 0.53
CHMP3-207ENST00000485465 ARHGAP29Q52LW3 1261 aa18.35■□□□□ 0.53
CHMP3-207ENST00000485465 GPR158Q5T848 1215 aa18.35■□□□□ 0.53
CHMP3-207ENST00000485465 KLHDC10Q6PID8 442 aa18.35■□□□□ 0.53
CHMP3-207ENST00000485465 RNF10Q8N5U6 811 aaKnown RBP18.35■□□□□ 0.53
CHMP3-207ENST00000485465 CNPY3Q9BT09 278 aa18.35■□□□□ 0.53
CHMP3-207ENST00000485465 SMOC2Q9H3U7 446 aa18.35■□□□□ 0.53
CHMP3-207ENST00000485465 KCND1Q9NSA2 647 aa18.35■□□□□ 0.53
CHMP3-207ENST00000485465 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.35■□□□□ 0.53
CHMP3-207ENST00000485465 IP6K2Q9UHH9 426 aa18.35■□□□□ 0.53
CHMP3-207ENST00000485465 LCMT1Q9UIC8 334 aa18.35■□□□□ 0.53
CHMP3-207ENST00000485465 GUCA1BQ9UMX6 200 aa18.35■□□□□ 0.53
CHMP3-207ENST00000485465 ZKSCAN5Q9Y2L8 839 aa18.35■□□□□ 0.53
CHMP3-207ENST00000485465 USP27XA6NNY8 438 aa18.34■□□□□ 0.53
CHMP3-207ENST00000485465 TFE3P19532 575 aaPredicted RBP18.34■□□□□ 0.53
CHMP3-207ENST00000485465 KCNA5P22460 613 aa18.34■□□□□ 0.53
CHMP3-207ENST00000485465 ATP5C1P36542 298 aaKnown RBP18.34■□□□□ 0.53
CHMP3-207ENST00000485465 SULT1E1P49888 294 aa18.34■□□□□ 0.53
CHMP3-207ENST00000485465 PITX1P78337 314 aaPredicted RBP18.34■□□□□ 0.53
CHMP3-207ENST00000485465 EFEMP1Q12805 493 aa18.34■□□□□ 0.53
CHMP3-207ENST00000485465 IFI16Q16666 785 aaKnown RBP18.34■□□□□ 0.53
CHMP3-207ENST00000485465 C15orf59Q2T9L4 293 aaPredicted RBP18.34■□□□□ 0.53
CHMP3-207ENST00000485465 STXBP5Q5T5C0 1151 aa18.34■□□□□ 0.53
CHMP3-207ENST00000485465 TAC4Q86UU9 113 aa18.34■□□□□ 0.53
CHMP3-207ENST00000485465 ARL14EPQ8N8R7 260 aaPredicted RBP18.34■□□□□ 0.53
CHMP3-207ENST00000485465 MAB21L3Q8N8X9 362 aa18.34■□□□□ 0.53
CHMP3-207ENST00000485465 TPCN2Q8NHX9 752 aa18.34■□□□□ 0.53
CHMP3-207ENST00000485465 ING5Q8WYH8 240 aa18.34■□□□□ 0.53
CHMP3-207ENST00000485465 CENPIQ92674 756 aaPredicted RBP18.34■□□□□ 0.53
CHMP3-207ENST00000485465 HLA-CQ95604 372 aa18.34■□□□□ 0.53
CHMP3-207ENST00000485465 TBCBQ99426 244 aa18.34■□□□□ 0.53
CHMP3-207ENST00000485465 SLC46A2Q9BY10 475 aa18.34■□□□□ 0.53
CHMP3-207ENST00000485465 ADAM33Q9BZ11 813 aa18.34■□□□□ 0.53
CHMP3-207ENST00000485465 NACA2Q9H009 215 aa18.34■□□□□ 0.53
CHMP3-207ENST00000485465 RNF38Q9H0F5 515 aa18.34■□□□□ 0.53
CHMP3-207ENST00000485465 TASP1Q9H6P5 420 aa18.34■□□□□ 0.53
CHMP3-207ENST00000485465 MARCH2Q9P0N8 246 aa18.34■□□□□ 0.53
CHMP3-207ENST00000485465 SFMBT1Q9UHJ3 866 aa18.34■□□□□ 0.53
CHMP3-207ENST00000485465 ZMYM5Q9UJ78 669 aa18.34■□□□□ 0.53
CHMP3-207ENST00000485465 DNMT3LQ9UJW3 386 aa18.34■□□□□ 0.53
CHMP3-207ENST00000485465 NOTCH4Q99466 2003 aa18.33■□□□□ 0.53
CHMP3-207ENST00000485465 TRAV19A0A0A6YYK7 116 aa18.33■□□□□ 0.52
CHMP3-207ENST00000485465 M0QYT0 321 aa18.33■□□□□ 0.52
CHMP3-207ENST00000485465 MDM4O15151 490 aa18.33■□□□□ 0.52
CHMP3-207ENST00000485465 PROSCO94903 275 aa18.33■□□□□ 0.52
CHMP3-207ENST00000485465 MOCS3O95396 460 aa18.33■□□□□ 0.52
CHMP3-207ENST00000485465 OLFM2O95897 454 aa18.33■□□□□ 0.52
CHMP3-207ENST00000485465 TRUB2O95900 331 aaKnown RBP18.33■□□□□ 0.52
CHMP3-207ENST00000485465 IGLV3-25P01717 112 aa18.33■□□□□ 0.52
CHMP3-207ENST00000485465 HDCP19113 662 aa18.33■□□□□ 0.52
CHMP3-207ENST00000485465 ATP11AP98196 1134 aa18.33■□□□□ 0.52
CHMP3-207ENST00000485465 PIGHQ14442 188 aaPredicted RBP18.33■□□□□ 0.52
CHMP3-207ENST00000485465 MESDQ14696 234 aa18.33■□□□□ 0.52
CHMP3-207ENST00000485465 OTUD1Q5VV17 481 aaPredicted RBP18.33■□□□□ 0.52
CHMP3-207ENST00000485465 BNIPLQ7Z465 357 aa18.33■□□□□ 0.52
CHMP3-207ENST00000485465 NIPA2Q8N8Q9 360 aa18.33■□□□□ 0.52
CHMP3-207ENST00000485465 ADAM32Q8TC27 787 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms