RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 TACC1O75410 805 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 PRPF6O94906 941 aaKnown RBP11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 ZDHHC11BP0C7U3 371 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 GAP43P17677 238 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 DGKGP49619 791 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 CSNK1EP49674 416 aaKnown RBP11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 TUBP50607 506 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 TPMTP51580 245 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 SLC5A3P53794 718 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 CLDN6P56747 220 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 SMAD1Q15797 465 aaKnown RBP11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 PTPRNQ16849 979 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 DUOXA2Q1HG44 320 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 KIF19Q2TAC6 998 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 DHRS13Q6UX07 377 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 PAQR9Q6ZVX9 377 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 TRAPPC11Q7Z392 1133 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 PDCD7Q8N8D1 485 aaKnown RBP11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 B3GALNT2Q8NCR0 500 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 XPO6Q96QU8 1125 aaKnown RBP11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 KIF2CQ99661 725 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 KLF16Q9BXK1 252 aaPredicted RBP11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 NACA2Q9H009 215 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 PRORYQ9H606 182 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 PLK2Q9NYY3 685 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 MARK1Q9P0L2 795 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 RAI2Q9Y5P3 530 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 HECTD1Q9ULT8 2610 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 ATMQ13315 3056 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 MYO18BQ8IUG5 2567 aa11.5□□□□□ -0.57
SMARCC1-205ENST00000483847 FAM92AA1XBS5 289 aa11.5□□□□□ -0.57
SMARCC1-205ENST00000483847 A8MXQ7 604 aa11.5□□□□□ -0.57
SMARCC1-205ENST00000483847 TK2O00142 265 aa11.5□□□□□ -0.57
SMARCC1-205ENST00000483847 PLK4O00444 970 aa11.5□□□□□ -0.57
SMARCC1-205ENST00000483847 TLR5O60602 858 aa11.5□□□□□ -0.57
SMARCC1-205ENST00000483847 ABCB7O75027 752 aa11.5□□□□□ -0.57
SMARCC1-205ENST00000483847 IL12RB1P42701 662 aa11.5□□□□□ -0.57
SMARCC1-205ENST00000483847 STARD3Q14849 445 aa11.5□□□□□ -0.57
SMARCC1-205ENST00000483847 WDR72Q3MJ13 1102 aa11.5□□□□□ -0.57
SMARCC1-205ENST00000483847 IL27RAQ6UWB1 636 aa11.5□□□□□ -0.57
SMARCC1-205ENST00000483847 FAM35AQ86V20 835 aa11.5□□□□□ -0.57
SMARCC1-205ENST00000483847 ZNF843Q8N446 348 aa11.5□□□□□ -0.57
SMARCC1-205ENST00000483847 OLFML3Q9NRN5 406 aa11.5□□□□□ -0.57
SMARCC1-205ENST00000483847 WDR35Q9P2L0 1181 aa11.5□□□□□ -0.57
SMARCC1-205ENST00000483847 PCDHB13Q9Y5F0 798 aa11.5□□□□□ -0.57
SMARCC1-205ENST00000483847 SNX11Q9Y5W9 270 aa11.5□□□□□ -0.57
SMARCC1-205ENST00000483847 ZNF233A6NK53 670 aa11.49□□□□□ -0.57
SMARCC1-205ENST00000483847 TNFSF14O43557 240 aa11.49□□□□□ -0.57
SMARCC1-205ENST00000483847 TLX3O43711 291 aaPredicted RBP11.49□□□□□ -0.57
SMARCC1-205ENST00000483847 IDEP14735 1019 aa11.49□□□□□ -0.57
SMARCC1-205ENST00000483847 COPAP53621 1224 aa11.49□□□□□ -0.57
SMARCC1-205ENST00000483847 NUMA1Q14980 2115 aa11.49□□□□□ -0.57
SMARCC1-205ENST00000483847 GEN1Q17RS7 908 aa11.49□□□□□ -0.57
SMARCC1-205ENST00000483847 LAYNQ6UX15 382 aa11.49□□□□□ -0.57
SMARCC1-205ENST00000483847 FAM124AQ86V42 546 aa11.49□□□□□ -0.57
SMARCC1-205ENST00000483847 TMPRSS6Q8IU80 811 aa11.49□□□□□ -0.57
SMARCC1-205ENST00000483847 WDR49Q8IV35 697 aa11.49□□□□□ -0.57
SMARCC1-205ENST00000483847 ZMIZ2Q8NF64 920 aa11.49□□□□□ -0.57
SMARCC1-205ENST00000483847 ELMO3Q96BJ8 720 aa11.49□□□□□ -0.57
SMARCC1-205ENST00000483847 SIPA1Q96FS4 1042 aa11.49□□□□□ -0.57
SMARCC1-205ENST00000483847 MED10Q9BTT4 135 aa11.49□□□□□ -0.57
SMARCC1-205ENST00000483847 DMAP1Q9NPF5 467 aaPredicted RBP11.49□□□□□ -0.57
SMARCC1-205ENST00000483847 OSER1Q9NX31 292 aa11.49□□□□□ -0.57
SMARCC1-205ENST00000483847 FBXO10Q9UK96 956 aa11.49□□□□□ -0.57
SMARCC1-205ENST00000483847 H3BQV1 296 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 MDM4O15151 490 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 BEST1O76090 585 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 IGLV3-19P01714 112 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 DLATP10515 647 aaKnown RBP11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 HLA-EP13747 358 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 ACO1P21399 889 aaKnown RBP11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 OXTRP30559 389 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 HOXD13P35453 343 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 EIF2S3P41091 472 aaKnown RBP11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 GRK6P43250 576 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 AFF3P51826 1226 aaKnown RBP11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 MFAP3P55082 362 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 CDH8P55286 799 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 MYL6P60660 151 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 TNNC1P63316 161 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 IL9RQ01113 521 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 ENPP2Q13822 863 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 SUZ12Q15022 739 aaKnown RBP11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 SF3A1Q15459 793 aaKnown RBP11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 SURF1Q15526 300 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 KCNT1Q5JUK3 1230 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 LARP1BQ659C4 914 aaKnown RBP11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 ZNF605Q86T29 641 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 FUKQ8N0W3 1084 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 RDH13Q8NBN7 331 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 SNX19Q92543 992 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 ZNF516Q92618 1163 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 HPS3Q969F9 1004 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 FCRL3Q96P31 734 aaPredicted RBP11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 SMOQ99835 787 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 GZF1Q9H116 711 aaPredicted RBP11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 XYLT2Q9H1B5 865 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 C6orf106Q9H6K1 298 aaPredicted RBP11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 SMYD3Q9H7B4 428 aa11.48□□□□□ -0.57
SMARCC1-205ENST00000483847 KRT82Q9NSB4 513 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms