RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 JADE1Q6IE81 842 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 SLFN12LQ6IEE8 588 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 CC2D1AQ6P1N0 951 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-207ENST00000483407 FOXD4L3Q6VB84 417 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-207ENST00000483407 CACNA2D4Q7Z3S7 1137 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 DCP1BQ8IZD4 617 aaKnown RBP6.32□□□□□ -1.4
CSDE1-207ENST00000483407 CMTM8Q8IZV2 173 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 TTC9BQ8N6N2 239 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 CELF2-AS1Q8N7Q2 184 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 OR10T2Q8NGX3 314 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 GAB3Q8WWW8 586 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 LOXL4Q96JB6 756 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 AK8Q96MA6 479 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 LRRC3BQ96PB8 259 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 SRPK1Q96SB4 655 aaKnown RBP6.32□□□□□ -1.4
CSDE1-207ENST00000483407 TM9SF2Q99805 663 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 REEP2Q9BRK0 252 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 PYM1Q9BRP8 204 aaKnown RBP6.32□□□□□ -1.4
CSDE1-207ENST00000483407 HAPLN2Q9GZV7 340 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 ZCWPW1Q9H0M4 648 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 ZHX3Q9H4I2 956 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 ASB7Q9H672 318 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 KIF9Q9HAQ2 790 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 ACTR10Q9NZ32 417 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 CPSF3Q9UKF6 684 aaKnown RBP6.32□□□□□ -1.4
CSDE1-207ENST00000483407 C2CD2Q9Y426 696 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 CORINQ9Y5Q5 1042 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 WDR87Q6ZQQ6 2873 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 ACACBO00763 2458 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 NOTCH4Q99466 2003 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 ANO9A1A5B4 782 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 PIRO00625 290 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 PPEF2O14830 753 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 DDX3YO15523 660 aaKnown RBP6.31□□□□□ -1.4
CSDE1-207ENST00000483407 EXTL3O43909 919 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 FAM189A1O60320 539 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 AKAP3O75969 853 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 PRAMEF12O95522 483 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 BMP15O95972 392 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 NFICP08651 508 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 SLFN14P0C7P3 912 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 ZNF806P0C7X5 589 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 CSH1P0DML2 217 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 CSH2P0DML3 217 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 HAPLN1P10915 354 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-207ENST00000483407 ATF6P18850 670 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 PNPLA4P41247 253 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 ZNF131P52739 623 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 LIMK1P53667 647 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 TSPY1Q01534 308 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 POU5F1Q01860 360 aaKnown RBP6.31□□□□□ -1.4
CSDE1-207ENST00000483407 RUNX3Q13761 415 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 NFE2Q16621 373 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-207ENST00000483407 DDR2Q16832 855 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 SV2CQ496J9 727 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 FBXO43Q4G163 708 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 ARSHQ5FYA8 562 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 EXOSC6Q5RKV6 272 aaKnown RBP6.31□□□□□ -1.4
CSDE1-207ENST00000483407 TMEM201Q5SNT2 666 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 ADALQ6DHV7 355 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 SDE2Q6IQ49 451 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 JAZF1Q86VZ6 243 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 TMEM130Q8N3G9 435 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 TAB3Q8N5C8 712 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-207ENST00000483407 CAMKK1Q8N5S9 505 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 MAB21L3Q8N8X9 362 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 MRPS31Q92665 395 aaKnown RBP6.31□□□□□ -1.4
CSDE1-207ENST00000483407 ELMO3Q96BJ8 720 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 ZNF560Q96MR9 790 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 SLC46A2Q9BY10 475 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 ARRDC1-AS1Q9H2J1 176 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 TNKS2Q9H2K2 1166 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 GKN1Q9NS71 199 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 KCNK4Q9NYG8 393 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 UXTQ9UBK9 157 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-207ENST00000483407 ANGPTL2Q9UKU9 493 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 PCDHGA5Q9Y5G8 931 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 FRYLO94915 3013 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 PATJQ8NI35 1801 aa6.31□□□□□ -1.4
CSDE1-207ENST00000483407 FAM221BA6H8Z2 402 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 KPNA7A9QM74 516 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 TRDMT1O14717 391 aaKnown RBP6.3□□□□□ -1.4
CSDE1-207ENST00000483407 ADAM23O75077 832 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 EPN2O95208 641 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 IL18RAPO95256 599 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 DRD1P21728 446 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 NMT1P30419 496 aaKnown RBP6.3□□□□□ -1.4
CSDE1-207ENST00000483407 PXNP49023 591 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-207ENST00000483407 ACOT2P49753 483 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 RPL10AP62906 217 aaKnown RBP6.3□□□□□ -1.4
CSDE1-207ENST00000483407 GTF2BQ00403 316 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 ZNF268Q14587 947 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-207ENST00000483407 KARSQ15046 597 aaKnown RBP6.3□□□□□ -1.4
CSDE1-207ENST00000483407 POSTNQ15063 836 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 PDGFRLQ15198 375 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 SF3A2Q15428 464 aaKnown RBP6.3□□□□□ -1.4
CSDE1-207ENST00000483407 ELF2Q15723 593 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 TMEM196Q5HYL7 178 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 ERICH6BQ5W0A0 696 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 WSCD1Q658N2 575 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms