RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 FBXL13Q8NEE6 735 aa16.05■□□□□ 0.16
LIMS3-203ENST00000480744 OLIG1Q8TAK6 271 aa16.05■□□□□ 0.16
LIMS3-203ENST00000480744 PIGKQ92643 395 aa16.05■□□□□ 0.16
LIMS3-203ENST00000480744 BHMTQ93088 406 aa16.05■□□□□ 0.16
LIMS3-203ENST00000480744 ERLEC1Q96DZ1 483 aa16.05■□□□□ 0.16
LIMS3-203ENST00000480744 XPO6Q96QU8 1125 aaKnown RBP16.05■□□□□ 0.16
LIMS3-203ENST00000480744 ARID3AQ99856 593 aa16.05■□□□□ 0.16
LIMS3-203ENST00000480744 RMND1Q9NWS8 449 aa16.05■□□□□ 0.16
LIMS3-203ENST00000480744 WDR35Q9P2L0 1181 aa16.05■□□□□ 0.16
LIMS3-203ENST00000480744 DNMT3LQ9UJW3 386 aa16.05■□□□□ 0.16
LIMS3-203ENST00000480744 GON4LQ3T8J9 2241 aa16.04■□□□□ 0.16
LIMS3-203ENST00000480744 ADAMTS9Q9P2N4 1935 aa16.04■□□□□ 0.16
LIMS3-203ENST00000480744 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.04■□□□□ 0.16
LIMS3-203ENST00000480744 GOLGA6L4A6NEF3 574 aa16.04■□□□□ 0.16
LIMS3-203ENST00000480744 PATE3B3GLJ2 98 aa16.04■□□□□ 0.16
LIMS3-203ENST00000480744 KHNYNO15037 678 aaKnown RBP16.04■□□□□ 0.16
LIMS3-203ENST00000480744 RALAP11233 206 aa16.04■□□□□ 0.16
LIMS3-203ENST00000480744 HOXB2P14652 356 aa16.04■□□□□ 0.16
LIMS3-203ENST00000480744 PLA2G4AP47712 749 aa16.04■□□□□ 0.16
LIMS3-203ENST00000480744 PSEN1P49768 467 aa16.04■□□□□ 0.16
LIMS3-203ENST00000480744 EGFLAMQ63HQ2 1017 aa16.04■□□□□ 0.16
LIMS3-203ENST00000480744 CCDC186Q7Z3E2 898 aa16.04■□□□□ 0.16
LIMS3-203ENST00000480744 SCD5Q86SK9 330 aa16.04■□□□□ 0.16
LIMS3-203ENST00000480744 TADA2BQ86TJ2 420 aa16.04■□□□□ 0.16
LIMS3-203ENST00000480744 TMEFF1Q8IYR6 380 aa16.04■□□□□ 0.16
LIMS3-203ENST00000480744 TMEM176AQ96HP8 235 aa16.04■□□□□ 0.16
LIMS3-203ENST00000480744 TSG101Q99816 390 aa16.04■□□□□ 0.16
LIMS3-203ENST00000480744 CISHQ9NSE2 258 aa16.04■□□□□ 0.16
LIMS3-203ENST00000480744 RAB20Q9NX57 234 aa16.04■□□□□ 0.16
LIMS3-203ENST00000480744 RASAL2Q9UJF2 1139 aa16.04■□□□□ 0.16
LIMS3-203ENST00000480744 LAMA1P25391 3075 aa16.04■□□□□ 0.16
LIMS3-203ENST00000480744 ACACBO00763 2458 aa16.04■□□□□ 0.16
LIMS3-203ENST00000480744 LNP1A1A4G5 178 aa16.03■□□□□ 0.16
LIMS3-203ENST00000480744 C4orf47A7E2U8 309 aa16.03■□□□□ 0.16
LIMS3-203ENST00000480744 TM4SF5O14894 197 aa16.03■□□□□ 0.16
LIMS3-203ENST00000480744 CACNG3O60359 315 aa16.03■□□□□ 0.16
LIMS3-203ENST00000480744 HMBSP08397 361 aa16.03■□□□□ 0.16
LIMS3-203ENST00000480744 NTSR1P30989 418 aa16.03■□□□□ 0.16
LIMS3-203ENST00000480744 PRCPP42785 496 aa16.03■□□□□ 0.16
LIMS3-203ENST00000480744 EFEMP1Q12805 493 aa16.03■□□□□ 0.16
LIMS3-203ENST00000480744 BYSLQ13895 437 aaKnown RBP16.03■□□□□ 0.16
LIMS3-203ENST00000480744 N4BP2L1Q5TBK1 243 aaPredicted RBP16.03■□□□□ 0.16
LIMS3-203ENST00000480744 SDE2Q6IQ49 451 aa16.03■□□□□ 0.16
LIMS3-203ENST00000480744 KLHDC10Q6PID8 442 aa16.03■□□□□ 0.16
LIMS3-203ENST00000480744 CHPFQ8IZ52 775 aa16.03■□□□□ 0.16
LIMS3-203ENST00000480744 TTC39CQ8N584 583 aa16.03■□□□□ 0.16
LIMS3-203ENST00000480744 SLC4A11Q8NBS3 891 aa16.03■□□□□ 0.16
LIMS3-203ENST00000480744 KCNV2Q8TDN2 545 aa16.03■□□□□ 0.16
LIMS3-203ENST00000480744 TATDN2Q93075 761 aa16.03■□□□□ 0.16
LIMS3-203ENST00000480744 PLK2Q9NYY3 685 aa16.03■□□□□ 0.16
LIMS3-203ENST00000480744 MARK1Q9P0L2 795 aa16.03■□□□□ 0.16
LIMS3-203ENST00000480744 MBD1Q9UIS9 605 aaPredicted RBP16.03■□□□□ 0.16
LIMS3-203ENST00000480744 ATXN2Q99700 1313 aaKnown RBP16.02■□□□□ 0.16
LIMS3-203ENST00000480744 ZBTB24O43167 697 aaPredicted RBP16.02■□□□□ 0.16
LIMS3-203ENST00000480744 STC2O76061 302 aa16.02■□□□□ 0.16
LIMS3-203ENST00000480744 DGKGP49619 791 aa16.02■□□□□ 0.16
LIMS3-203ENST00000480744 RAD23BP54727 409 aa16.02■□□□□ 0.16
LIMS3-203ENST00000480744 SLC8A3P57103 927 aa16.02■□□□□ 0.16
LIMS3-203ENST00000480744 BECN1Q14457 450 aa16.02■□□□□ 0.16
LIMS3-203ENST00000480744 MAP7D1Q3KQU3 841 aa16.02■□□□□ 0.16
LIMS3-203ENST00000480744 ZNF658Q5TYW1 1059 aaPredicted RBP16.02■□□□□ 0.16
LIMS3-203ENST00000480744 TOGARAM2Q6ZUX3 1019 aa16.02■□□□□ 0.16
LIMS3-203ENST00000480744 RSRC2Q7L4I2 434 aaKnown RBP16.02■□□□□ 0.16
LIMS3-203ENST00000480744 FMR1NBQ8N0W7 255 aaPredicted RBP16.02■□□□□ 0.16
LIMS3-203ENST00000480744 ERCC4Q92889 916 aaPredicted RBP16.02■□□□□ 0.16
LIMS3-203ENST00000480744 CDK5RAP1Q96SZ6 601 aaKnown RBP16.02■□□□□ 0.16
LIMS3-203ENST00000480744 ACOX2Q99424 681 aa16.02■□□□□ 0.16
LIMS3-203ENST00000480744 LSM14BQ9BX40 385 aaKnown RBP16.02■□□□□ 0.16
LIMS3-203ENST00000480744 HCN2Q9UL51 889 aa16.02■□□□□ 0.16
LIMS3-203ENST00000480744 USP3Q9Y6I4 520 aa16.02■□□□□ 0.16
LIMS3-203ENST00000480744 PRRT4C9JH25 899 aa16.01■□□□□ 0.15
LIMS3-203ENST00000480744 SLC16A3O15427 465 aaKnown RBP16.01■□□□□ 0.15
LIMS3-203ENST00000480744 KCNK5O95279 499 aa16.01■□□□□ 0.15
LIMS3-203ENST00000480744 SMC2O95347 1197 aa16.01■□□□□ 0.15
LIMS3-203ENST00000480744 GABRG2P18507 467 aa16.01■□□□□ 0.15
LIMS3-203ENST00000480744 PTGER3P43115 390 aa16.01■□□□□ 0.15
LIMS3-203ENST00000480744 GOLGA7BQ2TAP0 167 aa16.01■□□□□ 0.15
LIMS3-203ENST00000480744 CBWD6Q4V339 395 aa16.01■□□□□ 0.15
LIMS3-203ENST00000480744 CBWD3Q5JTY5 395 aa16.01■□□□□ 0.15
LIMS3-203ENST00000480744 CBWD5Q5RIA9 395 aa16.01■□□□□ 0.15
LIMS3-203ENST00000480744 DAB2IPQ5VWQ8 1189 aa16.01■□□□□ 0.15
LIMS3-203ENST00000480744 LYSMD4Q5XG99 296 aa16.01■□□□□ 0.15
LIMS3-203ENST00000480744 PSAPL1Q6NUJ1 521 aa16.01■□□□□ 0.15
LIMS3-203ENST00000480744 Q6ZNB5 142 aa16.01■□□□□ 0.15
LIMS3-203ENST00000480744 PIGZQ86VD9 579 aa16.01■□□□□ 0.15
LIMS3-203ENST00000480744 DEFB119Q8N690 84 aa16.01■□□□□ 0.15
LIMS3-203ENST00000480744 SMARCE1Q969G3 411 aa16.01■□□□□ 0.15
LIMS3-203ENST00000480744 FAXDC2Q96IV6 333 aa16.01■□□□□ 0.15
LIMS3-203ENST00000480744 TMEM9BQ9NQ34 198 aa16.01■□□□□ 0.15
LIMS3-203ENST00000480744 CLIC5Q9NZA1 410 aa16.01■□□□□ 0.15
LIMS3-203ENST00000480744 CALCOCO1Q9P1Z2 691 aa16.01■□□□□ 0.15
LIMS3-203ENST00000480744 STARD13Q9Y3M8 1113 aa16.01■□□□□ 0.15
LIMS3-203ENST00000480744 CACNA1BQ00975 2339 aa16.01■□□□□ 0.15
LIMS3-203ENST00000480744 MAP1BP46821 2468 aaKnown RBP16■□□□□ 0.15
LIMS3-203ENST00000480744 TRIM49BA6NDI0 452 aa16■□□□□ 0.15
LIMS3-203ENST00000480744 CD19P15391 556 aa16■□□□□ 0.15
LIMS3-203ENST00000480744 CORO1AP31146 461 aaKnown RBP16■□□□□ 0.15
LIMS3-203ENST00000480744 NOVA1P51513 510 aaKnown RBP16■□□□□ 0.15
LIMS3-203ENST00000480744 TKTL1P51854 596 aa16■□□□□ 0.15
LIMS3-203ENST00000480744 PMS1P54277 932 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms