RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 TRIM59Q8IWR1 403 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 FBXL6Q8N531 539 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 FBXL13Q8NEE6 735 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 APPL2Q8NEU8 664 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 OR5B17Q8NGF7 314 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 KIF18AQ8NI77 898 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 MICAL1Q8TDZ2 1067 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 HASPINQ8TF76 798 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 POF1BQ8WVV4 589 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 HPDLQ96IR7 371 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 FANCD2OSQ96PS1 177 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 SRPK1Q96SB4 655 aaKnown RBP6.59□□□□□ -1.35
SF3B1-209ENST00000479532 SLC38A3Q99624 504 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 TM9SF2Q99805 663 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 TUBGCP2Q9BSJ2 902 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 HERC2P3Q9BVR0 1158 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 CERS4Q9HA82 394 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 CYP4F12Q9HCS2 524 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 NGRNQ9NPE2 291 aaKnown RBP6.59□□□□□ -1.35
SF3B1-209ENST00000479532 TLR9Q9NR96 1032 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 ST7Q9NRC1 585 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.59□□□□□ -1.35
SF3B1-209ENST00000479532 MRPL17Q9NRX2 175 aaKnown RBP6.59□□□□□ -1.35
SF3B1-209ENST00000479532 PSD3Q9NYI0 1048 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 ADAM30Q9UKF2 790 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 TMA7Q9Y2S6 64 aaKnown RBP6.59□□□□□ -1.35
SF3B1-209ENST00000479532 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.59□□□□□ -1.35
SF3B1-209ENST00000479532 PLXNA4Q9HCM2 1894 aa6.59□□□□□ -1.35
SF3B1-209ENST00000479532 PTPRJQ12913 1337 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 SLC22A31A6NKX4 558 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 TTC36A6NLP5 189 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 KPNA7A9QM74 516 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 RBAK-RBAKDNI3L0D1 243 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 KIF2AO00139 706 aaPredicted RBP6.58□□□□□ -1.36
SF3B1-209ENST00000479532 PMM2O15305 246 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 MEFVO15553 781 aaPredicted RBP6.58□□□□□ -1.36
SF3B1-209ENST00000479532 SERPINC1P01008 464 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 HLA-DRAP01903 254 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 C4BPAP04003 597 aaKnown RBP6.58□□□□□ -1.36
SF3B1-209ENST00000479532 PRNPP04156 253 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 ITGB1P05556 798 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 NEFHP12036 1026 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 FMO5P49326 533 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 GLUD2P49448 558 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 GUCY2FP51841 1108 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 LILRA4P59901 499 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 YWHAEP62258 255 aaKnown RBP6.58□□□□□ -1.36
SF3B1-209ENST00000479532 YWHAHQ04917 246 aaPredicted RBP6.58□□□□□ -1.36
SF3B1-209ENST00000479532 ZKSCAN8Q15776 578 aaPredicted RBP6.58□□□□□ -1.36
SF3B1-209ENST00000479532 DDR2Q16832 855 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 VWA3BQ502W6 1294 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 TIGD5Q53EQ6 642 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 HSP90AA4PQ58FG1 418 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 ZNF667Q5HYK9 610 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 FAM171A1Q5VUB5 890 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 CDKAL1Q5VV42 579 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 TDRD10Q5VZ19 366 aaKnown RBP6.58□□□□□ -1.36
SF3B1-209ENST00000479532 GBP6Q6ZN66 633 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 NLRC3Q7RTR2 1065 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 DHX40Q8IX18 779 aaKnown RBP6.58□□□□□ -1.36
SF3B1-209ENST00000479532 GPR65Q8IYL9 337 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 VPS52Q8N1B4 723 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 THEM5Q8N1Q8 247 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 TMEM86AQ8N2M4 240 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 TTC39CQ8N584 583 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 C19orf47Q8N9M1 422 aaKnown RBP6.58□□□□□ -1.36
SF3B1-209ENST00000479532 SPATA18Q8TC71 538 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 KIAA1524Q8TCG1 905 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 PLEKHO2Q8TD55 490 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 GDPD5Q8WTR4 605 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 RABGGTAQ92696 567 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 SLC35C1Q96A29 364 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 ACSF2Q96CM8 615 aaPredicted RBP6.58□□□□□ -1.36
SF3B1-209ENST00000479532 BORCS6Q96GS4 357 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 FAXDC2Q96IV6 333 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 FAM81BQ96LP2 452 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 NT5C1BQ96P26 610 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 DEPDC7Q96QD5 511 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 MMS19Q96T76 1030 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 TCF25Q9BQ70 676 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 PAAF1Q9BRP4 392 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 TTPALQ9BTX7 342 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 CXCL16Q9H2A7 254 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 ALG13Q9NP73 1137 aaKnown RBP6.58□□□□□ -1.36
SF3B1-209ENST00000479532 SAMSN1Q9NSI8 373 aaKnown RBP6.58□□□□□ -1.36
SF3B1-209ENST00000479532 FANCLQ9NW38 375 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 MARCH5Q9NX47 278 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 RAB20Q9NX57 234 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 LMCD1Q9NZU5 365 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 CACNG4Q9UBN1 327 aa6.58□□□□□ -1.36
SF3B1-209ENST00000479532 NCANO14594 1321 aa6.57□□□□□ -1.36
SF3B1-209ENST00000479532 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-209ENST00000479532 A0A1W2PQH9 124 aa6.57□□□□□ -1.36
SF3B1-209ENST00000479532 TLDC2A0PJX2 215 aa6.57□□□□□ -1.36
SF3B1-209ENST00000479532 GTPBP10A4D1E9 387 aaKnown RBP6.57□□□□□ -1.36
SF3B1-209ENST00000479532 B8ZZF3 427 aa6.57□□□□□ -1.36
SF3B1-209ENST00000479532 M0QZQ0 153 aa6.57□□□□□ -1.36
SF3B1-209ENST00000479532 CYB561D2O14569 222 aa6.57□□□□□ -1.36
SF3B1-209ENST00000479532 FANCGO15287 622 aa6.57□□□□□ -1.36
SF3B1-209ENST00000479532 CBFA2T2O43439 604 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms