RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 CWF19L1Q69YN2 538 aaKnown RBP21.44■■□□□ 1.02
VARS-224ENST00000479051 WDTC1Q8N5D0 677 aa21.44■■□□□ 1.02
VARS-224ENST00000479051 CLEC4CQ8WTT0 213 aa21.44■■□□□ 1.02
VARS-224ENST00000479051 DDX1Q92499 740 aaKnown RBP21.44■■□□□ 1.02
VARS-224ENST00000479051 EDEM1Q92611 657 aa21.44■■□□□ 1.02
VARS-224ENST00000479051 NUP58Q9BVL2 599 aa21.44■■□□□ 1.02
VARS-224ENST00000479051 OSBPL6Q9BZF3 934 aa21.44■■□□□ 1.02
VARS-224ENST00000479051 ECT2Q9H8V3 914 aa21.44■■□□□ 1.02
VARS-224ENST00000479051 LTB4R2Q9NPC1 389 aa21.44■■□□□ 1.02
VARS-224ENST00000479051 SIT1Q9Y3P8 196 aa21.44■■□□□ 1.02
VARS-224ENST00000479051 SLC12A8A0AV02 714 aa21.43■■□□□ 1.02
VARS-224ENST00000479051 CBFA2T2O43439 604 aa21.43■■□□□ 1.02
VARS-224ENST00000479051 FERP16591 822 aa21.43■■□□□ 1.02
VARS-224ENST00000479051 AVPR2P30518 371 aa21.43■■□□□ 1.02
VARS-224ENST00000479051 CDH5P33151 784 aaPredicted RBP21.43■■□□□ 1.02
VARS-224ENST00000479051 ARID5AQ03989 594 aa21.43■■□□□ 1.02
VARS-224ENST00000479051 TRIM72Q6ZMU5 477 aa21.43■■□□□ 1.02
VARS-224ENST00000479051 TOGARAM2Q6ZUX3 1019 aa21.43■■□□□ 1.02
VARS-224ENST00000479051 RNF214Q8ND24 703 aa21.43■■□□□ 1.02
VARS-224ENST00000479051 PJA1Q8NG27 643 aa21.43■■□□□ 1.02
VARS-224ENST00000479051 CPXM1Q96SM3 734 aa21.43■■□□□ 1.02
VARS-224ENST00000479051 EDEM3Q9BZQ6 932 aa21.43■■□□□ 1.02
VARS-224ENST00000479051 FOXQ1Q9C009 403 aa21.43■■□□□ 1.02
VARS-224ENST00000479051 DCLK3Q9C098 648 aa21.43■■□□□ 1.02
VARS-224ENST00000479051 LINC00597Q9H2U6 94 aa21.43■■□□□ 1.02
VARS-224ENST00000479051 IFNKQ9P0W0 207 aa21.43■■□□□ 1.02
VARS-224ENST00000479051 NOCTQ9UK39 431 aaKnown RBP21.43■■□□□ 1.02
VARS-224ENST00000479051 ZNF510Q9Y2H8 683 aa21.43■■□□□ 1.02
VARS-224ENST00000479051 COL4A2P08572 1712 aa21.43■■□□□ 1.02
VARS-224ENST00000479051 FAM170BA6NMN3 283 aa21.42■■□□□ 1.02
VARS-224ENST00000479051 CAPN9O14815 690 aa21.42■■□□□ 1.02
VARS-224ENST00000479051 PAPSS1O43252 624 aaPredicted RBP21.42■■□□□ 1.02
VARS-224ENST00000479051 ADH1CP00326 375 aa21.42■■□□□ 1.02
VARS-224ENST00000479051 GLI1P08151 1106 aa21.42■■□□□ 1.02
VARS-224ENST00000479051 MMEP08473 750 aa21.42■■□□□ 1.02
VARS-224ENST00000479051 NCAM1P13591 858 aa21.42■■□□□ 1.02
VARS-224ENST00000479051 CD72P21854 359 aa21.42■■□□□ 1.02
VARS-224ENST00000479051 EFHC1Q5JVL4 640 aa21.42■■□□□ 1.02
VARS-224ENST00000479051 MSANTD2Q6P1R3 559 aa21.42■■□□□ 1.02
VARS-224ENST00000479051 HTR3DQ70Z44 454 aa21.42■■□□□ 1.02
VARS-224ENST00000479051 BEND5Q7L4P6 421 aa21.42■■□□□ 1.02
VARS-224ENST00000479051 ERICH1Q86X53 443 aa21.42■■□□□ 1.02
VARS-224ENST00000479051 ZDHHC17Q8IUH5 632 aa21.42■■□□□ 1.02
VARS-224ENST00000479051 PLD4Q96BZ4 506 aa21.42■■□□□ 1.02
VARS-224ENST00000479051 IQCDQ96DY2 449 aa21.42■■□□□ 1.02
VARS-224ENST00000479051 NDRG2Q9UN36 371 aaKnown RBP21.42■■□□□ 1.02
VARS-224ENST00000479051 HBS1LQ9Y450 684 aaKnown RBP21.42■■□□□ 1.02
VARS-224ENST00000479051 SCAMP3O14828 347 aaKnown RBP21.41■■□□□ 1.02
VARS-224ENST00000479051 STC2O76061 302 aa21.41■■□□□ 1.02
VARS-224ENST00000479051 SOX9P48436 509 aa21.41■■□□□ 1.02
VARS-224ENST00000479051 VCPP55072 806 aaKnown RBP21.41■■□□□ 1.02
VARS-224ENST00000479051 YWHAZP63104 245 aaKnown RBP21.41■■□□□ 1.02
VARS-224ENST00000479051 PTPN20Q4JDL3 420 aa21.41■■□□□ 1.02
VARS-224ENST00000479051 FIGNQ5HY92 759 aa21.41■■□□□ 1.02
VARS-224ENST00000479051 OR6B2Q6IFH4 312 aa21.41■■□□□ 1.02
VARS-224ENST00000479051 BBS7Q8IWZ6 715 aa21.41■■□□□ 1.02
VARS-224ENST00000479051 SLC20A1Q8WUM9 679 aa21.41■■□□□ 1.02
VARS-224ENST00000479051 POPDC2Q9HBU9 364 aa21.41■■□□□ 1.02
VARS-224ENST00000479051 ASNSD1Q9NWL6 643 aa21.41■■□□□ 1.02
VARS-224ENST00000479051 HCN4Q9Y3Q4 1203 aa21.41■■□□□ 1.02
VARS-224ENST00000479051 HSF2BPO75031 334 aa21.4■■□□□ 1.02
VARS-224ENST00000479051 HMBSP08397 361 aa21.4■■□□□ 1.02
VARS-224ENST00000479051 GJA4P35212 333 aa21.4■■□□□ 1.02
VARS-224ENST00000479051 MAGEA9P43362 315 aa21.4■■□□□ 1.02
VARS-224ENST00000479051 HARS2P49590 506 aaKnown RBP21.4■■□□□ 1.02
VARS-224ENST00000479051 NUBP1P53384 320 aa21.4■■□□□ 1.02
VARS-224ENST00000479051 LRRC32Q14392 662 aa21.4■■□□□ 1.02
VARS-224ENST00000479051 NAA35Q5VZE5 725 aa21.4■■□□□ 1.02
VARS-224ENST00000479051 ADGRG2Q8IZP9 1017 aa21.4■■□□□ 1.02
VARS-224ENST00000479051 TMEM105Q8N8V8 129 aa21.4■■□□□ 1.02
VARS-224ENST00000479051 C18orf8Q96DM3 657 aa21.4■■□□□ 1.02
VARS-224ENST00000479051 PRRX2Q99811 253 aa21.4■■□□□ 1.02
VARS-224ENST00000479051 SEPT11Q9NVA2 429 aaKnown RBP21.4■■□□□ 1.02
VARS-224ENST00000479051 SFMBT1Q9UHJ3 866 aa21.4■■□□□ 1.02
VARS-224ENST00000479051 ERBB2P04626 1255 aa21.39■■□□□ 1.01
VARS-224ENST00000479051 CYP17A1P05093 508 aa21.39■■□□□ 1.01
VARS-224ENST00000479051 TARSP26639 723 aaKnown RBP21.39■■□□□ 1.01
VARS-224ENST00000479051 NOMO3P69849 1222 aa21.39■■□□□ 1.01
VARS-224ENST00000479051 FMO1Q01740 532 aa21.39■■□□□ 1.01
VARS-224ENST00000479051 DHCR24Q15392 516 aa21.39■■□□□ 1.01
VARS-224ENST00000479051 ASIC2Q16515 512 aa21.39■■□□□ 1.01
VARS-224ENST00000479051 SFMBT2Q5VUG0 894 aa21.39■■□□□ 1.01
VARS-224ENST00000479051 FAM183BPQ6ZVS7 135 aa21.39■■□□□ 1.01
VARS-224ENST00000479051 CCDC105Q8IYK2 499 aa21.39■■□□□ 1.01
VARS-224ENST00000479051 ZNF397Q8NF99 534 aaPredicted RBP21.39■■□□□ 1.01
VARS-224ENST00000479051 BAP1Q92560 729 aa21.39■■□□□ 1.01
VARS-224ENST00000479051 SERPINB11Q96P15 392 aa21.39■■□□□ 1.01
VARS-224ENST00000479051 NUCKS1Q9H1E3 243 aaKnown RBP21.39■■□□□ 1.01
VARS-224ENST00000479051 TJP2Q9UDY2 1190 aa21.39■■□□□ 1.01
VARS-224ENST00000479051 ZDBF2Q9HCK1 2354 aa21.38■■□□□ 1.01
VARS-224ENST00000479051 OTOL1A6NHN0 477 aaPredicted RBP21.38■■□□□ 1.01
VARS-224ENST00000479051 LRRC53A6NM62 1247 aa21.38■■□□□ 1.01
VARS-224ENST00000479051 PI15O43692 258 aa21.38■■□□□ 1.01
VARS-224ENST00000479051 CYP1A1P04798 512 aaPredicted RBP21.38■■□□□ 1.01
VARS-224ENST00000479051 DCNP07585 359 aaKnown RBP21.38■■□□□ 1.01
VARS-224ENST00000479051 ADH5P11766 374 aa21.38■■□□□ 1.01
VARS-224ENST00000479051 CORO1AP31146 461 aaKnown RBP21.38■■□□□ 1.01
VARS-224ENST00000479051 PBX1P40424 430 aa21.38■■□□□ 1.01
VARS-224ENST00000479051 SLC6A3Q01959 620 aa21.38■■□□□ 1.01
VARS-224ENST00000479051 GAD2Q05329 585 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms