RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 LHX1P48742 406 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 ACOT2P49753 483 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 COPAP53621 1224 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 NCKAP1LP55160 1127 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 ERVPABLB-1P60509 514 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 POU5F1Q01860 360 aaKnown RBP7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 RAD51AP2Q09MP3 1159 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 ZNF174Q15697 407 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 BMP2KLQ5H9B9 411 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 CLEC18BQ6UXF7 455 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 C4orf50Q6ZRC1 276 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 KCNK18Q7Z418 384 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 LSMEM2Q8N112 164 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 EID2Q8N6I1 236 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 CLEC18CQ8NCF0 446 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 CXorf38Q8TB03 319 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 KCNE4Q8WWG9 221 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 SNX19Q92543 992 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 WASF1Q92558 559 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 ZNF560Q96MR9 790 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 XPO6Q96QU8 1125 aaKnown RBP7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 ELF4Q99607 663 aaPredicted RBP7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 CRTAC1Q9NQ79 661 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 GDAP2Q9NXN4 497 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 MARK1Q9P0L2 795 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 WDR35Q9P2L0 1181 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 THAP10Q9P2Z0 257 aaPredicted RBP7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 MAGEC2Q9UBF1 373 aaPredicted RBP7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 SH3BP1Q9Y3L3 701 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 LRRK2Q5S007 2527 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 CEP192Q8TEP8 1941 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 ENO4A6NNW6 628 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 NEDD8-MDP1E9PL57 170 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 F8VP50 259 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 H0YCG3 227 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 NPC1O15118 1278 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 GPR37O15354 613 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 CDC45O75419 566 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 MT-CO3P00414 261 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 MPOP05164 745 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 ITGAVP06756 1048 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 ACADMP11310 421 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 MYF5P13349 255 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 CKMT2P17540 419 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 ITGB6P18564 788 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 PCSK1P29120 753 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 LSSP48449 732 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 DGKGP49619 791 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 SKOR1P84550 965 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 NFKB2Q00653 900 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 SOWAHAQ2M3V2 549 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 LINC00303Q3SY05 128 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 C6orf132Q5T0Z8 1188 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 SNX30Q5VWJ9 437 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 TDRD10Q5VZ19 366 aaKnown RBP7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 CRELD2Q6UXH1 353 aaPredicted RBP7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 HTR3DQ70Z44 454 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 LIMS2Q7Z4I7 341 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 FAM124AQ86V42 546 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 PARP9Q8IXQ6 854 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 ADGRF2Q8IZF7 708 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 TOP6BLQ8N6T0 577 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 IGSF22Q8N9C0 903 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 MYLPFQ96A32 169 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 P2RY11Q96G91 374 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 C8orf48Q96LL4 319 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 PCMTD1Q96MG8 357 aaPredicted RBP7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 SLITRK1Q96PX8 696 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 PSMG3-AS1Q96PY0 264 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 BBS2Q9BXC9 721 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 HSPBP1Q9NZL4 362 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 ADAMTS1Q9UHI8 967 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 PCDHB1Q9Y5F3 818 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 CYP46A1Q9Y6A2 500 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 CITO14578 2027 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 TSC2P49815 1807 aa7.78□□□□□ -1.16
SPTLC1-205ENST00000477888 OBSL1O75147 1896 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 NBPF19A0A087WUL8 3843 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 SYNCRIPO60506 623 aaKnown RBP7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 PFKFB2O60825 505 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 ABCB4P21439 1286 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 ACP1P24666 158 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 ANXA13P27216 316 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 POLR2BP30876 1174 aaKnown RBP7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 CACNA2D1P54289 1103 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 PSMC1P62191 440 aaKnown RBP7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 RACK1P63244 317 aaKnown RBP7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 E2F1Q01094 437 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 GRIN1Q05586 938 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 ORC2Q13416 577 aaPredicted RBP7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 ARL13BQ3SXY8 428 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 HECTD3Q5T447 861 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 SFMBT2Q5VUG0 894 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 XKR5Q6UX68 686 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 KDM7AQ6ZMT4 941 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 TPGS1Q6ZTW0 290 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 NT5DC4Q86YG4 428 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 C1orf127Q8N9H9 656 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 SYT2Q8N9I0 419 aaPredicted RBP7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 RBBP8NLQ8NC74 664 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms