RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 PSEN1P49768 467 aa17.02■□□□□ 0.32
COL1A1-205ENST00000476387 LIMK1P53667 647 aa17.02■□□□□ 0.32
COL1A1-205ENST00000476387 BST2Q10589 180 aaKnown RBP17.02■□□□□ 0.32
COL1A1-205ENST00000476387 CRY1Q16526 586 aa17.02■□□□□ 0.32
COL1A1-205ENST00000476387 PLA2G2CQ5R387 149 aa17.02■□□□□ 0.32
COL1A1-205ENST00000476387 BTBD8Q5XKL5 378 aa17.02■□□□□ 0.32
COL1A1-205ENST00000476387 RRAGAQ7L523 313 aa17.02■□□□□ 0.32
COL1A1-205ENST00000476387 CCDC186Q7Z3E2 898 aa17.02■□□□□ 0.32
COL1A1-205ENST00000476387 C12orf40Q86WS4 652 aa17.02■□□□□ 0.32
COL1A1-205ENST00000476387 ARHGEF19Q8IW93 802 aa17.02■□□□□ 0.32
COL1A1-205ENST00000476387 ETFBKMTQ8IXQ9 262 aa17.02■□□□□ 0.32
COL1A1-205ENST00000476387 MED15Q96RN5 788 aa17.02■□□□□ 0.32
COL1A1-205ENST00000476387 THAP9Q9H5L6 903 aa17.02■□□□□ 0.32
COL1A1-205ENST00000476387 ARHGEF4Q9NR80 690 aa17.02■□□□□ 0.32
COL1A1-205ENST00000476387 NAGPAQ9UK23 515 aa17.02■□□□□ 0.32
COL1A1-205ENST00000476387 DCDC2BA2VCK2 349 aa17.01■□□□□ 0.31
COL1A1-205ENST00000476387 GDF9O60383 454 aa17.01■□□□□ 0.31
COL1A1-205ENST00000476387 KIR2DL1P43626 348 aaPredicted RBP17.01■□□□□ 0.31
COL1A1-205ENST00000476387 PGFP49763 221 aa17.01■□□□□ 0.31
COL1A1-205ENST00000476387 GOLGA8FQ08AF8 430 aa17.01■□□□□ 0.31
COL1A1-205ENST00000476387 GOLGA8DPQ0D2H9 430 aa17.01■□□□□ 0.31
COL1A1-205ENST00000476387 MESP2Q0VG99 397 aa17.01■□□□□ 0.31
COL1A1-205ENST00000476387 USP39Q53GS9 565 aaKnown RBP17.01■□□□□ 0.31
COL1A1-205ENST00000476387 KLHDC10Q6PID8 442 aa17.01■□□□□ 0.31
COL1A1-205ENST00000476387 HTR3DQ70Z44 454 aa17.01■□□□□ 0.31
COL1A1-205ENST00000476387 TADA2BQ86TJ2 420 aa17.01■□□□□ 0.31
COL1A1-205ENST00000476387 PIGZQ86VD9 579 aa17.01■□□□□ 0.31
COL1A1-205ENST00000476387 TTC30AQ86WT1 665 aa17.01■□□□□ 0.31
COL1A1-205ENST00000476387 BBS7Q8IWZ6 715 aa17.01■□□□□ 0.31
COL1A1-205ENST00000476387 PHTF2Q8N3S3 785 aa17.01■□□□□ 0.31
COL1A1-205ENST00000476387 C12orf50Q8NA57 414 aaPredicted RBP17.01■□□□□ 0.31
COL1A1-205ENST00000476387 IL17RCQ8NAC3 791 aa17.01■□□□□ 0.31
COL1A1-205ENST00000476387 RBBP8NLQ8NC74 664 aaPredicted RBP17.01■□□□□ 0.31
COL1A1-205ENST00000476387 GPT2Q8TD30 523 aa17.01■□□□□ 0.31
COL1A1-205ENST00000476387 KCNV2Q8TDN2 545 aa17.01■□□□□ 0.31
COL1A1-205ENST00000476387 DDX1Q92499 740 aaKnown RBP17.01■□□□□ 0.31
COL1A1-205ENST00000476387 KAT5Q92993 513 aa17.01■□□□□ 0.31
COL1A1-205ENST00000476387 KLF16Q9BXK1 252 aaPredicted RBP17.01■□□□□ 0.31
COL1A1-205ENST00000476387 UBXN6Q9BZV1 441 aa17.01■□□□□ 0.31
COL1A1-205ENST00000476387 SPHK2Q9NRA0 654 aa17.01■□□□□ 0.31
COL1A1-205ENST00000476387 VPS45Q9NRW7 570 aa17.01■□□□□ 0.31
COL1A1-205ENST00000476387 A0A1W2PQH9 124 aa17■□□□□ 0.31
COL1A1-205ENST00000476387 O00370 1275 aa17■□□□□ 0.31
COL1A1-205ENST00000476387 XPO1O14980 1071 aaKnown RBP17■□□□□ 0.31
COL1A1-205ENST00000476387 GREM1O60565 184 aa17■□□□□ 0.31
COL1A1-205ENST00000476387 ALDH1A2O94788 518 aa17■□□□□ 0.31
COL1A1-205ENST00000476387 MBD3O95983 291 aa17■□□□□ 0.31
COL1A1-205ENST00000476387 SETSIPP0DME0 302 aa17■□□□□ 0.31
COL1A1-205ENST00000476387 IRF1P10914 325 aa17■□□□□ 0.31
COL1A1-205ENST00000476387 RALAP11233 206 aa17■□□□□ 0.31
COL1A1-205ENST00000476387 ATP5C1P36542 298 aaKnown RBP17■□□□□ 0.31
COL1A1-205ENST00000476387 MPLP40238 635 aa17■□□□□ 0.31
COL1A1-205ENST00000476387 PDE4CQ08493 712 aa17■□□□□ 0.31
COL1A1-205ENST00000476387 STILQ15468 1287 aa17■□□□□ 0.31
COL1A1-205ENST00000476387 AASDHQ4L235 1098 aaPredicted RBP17■□□□□ 0.31
COL1A1-205ENST00000476387 CT47A1Q5JQC4 288 aaPredicted RBP17■□□□□ 0.31
COL1A1-205ENST00000476387 GBP6Q6ZN66 633 aa17■□□□□ 0.31
COL1A1-205ENST00000476387 ARHGAP18Q8N392 663 aa17■□□□□ 0.31
COL1A1-205ENST00000476387 ZNF276Q8N554 614 aa17■□□□□ 0.31
COL1A1-205ENST00000476387 CCDC33Q8N5R6 958 aa17■□□□□ 0.31
COL1A1-205ENST00000476387 FAM81BQ96LP2 452 aa17■□□□□ 0.31
COL1A1-205ENST00000476387 CDK5RAP1Q96SZ6 601 aaKnown RBP17■□□□□ 0.31
COL1A1-205ENST00000476387 CRACR2AQ9BSW2 395 aa17■□□□□ 0.31
COL1A1-205ENST00000476387 LRRC4Q9HBW1 653 aa17■□□□□ 0.31
COL1A1-205ENST00000476387 DEC1Q9P2X7 70 aa17■□□□□ 0.31
COL1A1-205ENST00000476387 USP3Q9Y6I4 520 aa17■□□□□ 0.31
COL1A1-205ENST00000476387 DCLK1O15075 740 aa16.99■□□□□ 0.31
COL1A1-205ENST00000476387 TULP3O75386 442 aa16.99■□□□□ 0.31
COL1A1-205ENST00000476387 KLF8O95600 359 aaPredicted RBP16.99■□□□□ 0.31
COL1A1-205ENST00000476387 TBX18O95935 607 aa16.99■□□□□ 0.31
COL1A1-205ENST00000476387 RARGP13631 454 aa16.99■□□□□ 0.31
COL1A1-205ENST00000476387 KRT5P13647 590 aa16.99■□□□□ 0.31
COL1A1-205ENST00000476387 TKTL1P51854 596 aa16.99■□□□□ 0.31
COL1A1-205ENST00000476387 KDSRQ06136 332 aa16.99■□□□□ 0.31
COL1A1-205ENST00000476387 SF3A2Q15428 464 aaKnown RBP16.99■□□□□ 0.31
COL1A1-205ENST00000476387 MAN2A1Q16706 1144 aa16.99■□□□□ 0.31
COL1A1-205ENST00000476387 EXOC3L4Q17RC7 722 aa16.99■□□□□ 0.31
COL1A1-205ENST00000476387 EOGTQ5NDL2 527 aa16.99■□□□□ 0.31
COL1A1-205ENST00000476387 C10orf120Q5SQS8 335 aa16.99■□□□□ 0.31
COL1A1-205ENST00000476387 ANO7Q6IWH7 933 aa16.99■□□□□ 0.31
COL1A1-205ENST00000476387 TRIM65Q6PJ69 517 aa16.99■□□□□ 0.31
COL1A1-205ENST00000476387 NUDT18Q6ZVK8 323 aa16.99■□□□□ 0.31
COL1A1-205ENST00000476387 ENOSF1Q7L5Y1 443 aa16.99■□□□□ 0.31
COL1A1-205ENST00000476387 TMEM25Q86YD3 366 aa16.99■□□□□ 0.31
COL1A1-205ENST00000476387 IRF2BP1Q8IU81 584 aa16.99■□□□□ 0.31
COL1A1-205ENST00000476387 SFTPA1Q8IWL2 248 aa16.99■□□□□ 0.31
COL1A1-205ENST00000476387 ALLCQ8N6M5 410 aa16.99■□□□□ 0.31
COL1A1-205ENST00000476387 TXNDC5Q8NBS9 432 aaKnown RBP16.99■□□□□ 0.31
COL1A1-205ENST00000476387 MDGA1Q8NFP4 955 aa16.99■□□□□ 0.31
COL1A1-205ENST00000476387 NMUR1Q9HB89 426 aa16.99■□□□□ 0.31
COL1A1-205ENST00000476387 UBE2TQ9NPD8 197 aaPredicted RBP16.99■□□□□ 0.31
COL1A1-205ENST00000476387 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.99■□□□□ 0.31
COL1A1-205ENST00000476387 OSER1Q9NX31 292 aa16.99■□□□□ 0.31
COL1A1-205ENST00000476387 DNMT3LQ9UJW3 386 aa16.99■□□□□ 0.31
COL1A1-205ENST00000476387 LSM7Q9UK45 103 aaKnown RBP16.99■□□□□ 0.31
COL1A1-205ENST00000476387 MYO18AQ92614 2054 aaKnown RBP16.98■□□□□ 0.31
COL1A1-205ENST00000476387 BCLAF3A2AJT9 711 aaKnown RBP16.98■□□□□ 0.31
COL1A1-205ENST00000476387 GTPBP10A4D1E9 387 aaKnown RBP16.98■□□□□ 0.31
COL1A1-205ENST00000476387 TBC1D3BA6NDS4 549 aa16.98■□□□□ 0.31
COL1A1-205ENST00000476387 ANTXRLA6NF34 631 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms