RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 SLC9A4Q6AI14 798 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 ARRDC4Q8NCT1 418 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 SLC2A14Q8TDB8 520 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 LRRN4Q8WUT4 740 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 USP6NLQ92738 828 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 ZNF570Q96NI8 536 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 SMC6Q96SB8 1091 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 IPPQ9Y573 584 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.61■□□□□ 0.25
VARS2-207ENST00000476162 IGF2BP3O00425 579 aaKnown RBP eCLIP16.61■□□□□ 0.25
VARS2-207ENST00000476162 AHCYL1O43865 530 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 CYP2B6P20813 491 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 TGM2P21980 687 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 RBL1P28749 1068 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 FOXN2P32314 431 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 TAF6P49848 677 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 IL9RQ01113 521 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 TBC1D25Q3MII6 688 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 SLC26A9Q7LBE3 791 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 IGDCC3Q8IVU1 814 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 DRAXINQ8NBI3 349 aaPredicted RBP16.61■□□□□ 0.25
VARS2-207ENST00000476162 APPL2Q8NEU8 664 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 ZNF560Q96MR9 790 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 C11orf84Q9BUA3 381 aaPredicted RBP16.61■□□□□ 0.25
VARS2-207ENST00000476162 MAGEB5Q9BZ81 275 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 CHMP2BQ9UQN3 213 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 USP15Q9Y4E8 981 aaPredicted RBP16.61■□□□□ 0.25
VARS2-207ENST00000476162 CENPFP49454 3210 aa16.6■□□□□ 0.25
VARS2-207ENST00000476162 TRIP12Q14669 1992 aaPredicted RBP16.6■□□□□ 0.25
VARS2-207ENST00000476162 PRPF4O43172 522 aaKnown RBP eCLIP16.6■□□□□ 0.251e-9■■■□□ 17.8
VARS2-207ENST00000476162 XPOTO43592 962 aaKnown RBP16.6■□□□□ 0.25
VARS2-207ENST00000476162 ASMTLO95671 621 aa16.6■□□□□ 0.25
VARS2-207ENST00000476162 CRYBB1P53674 252 aaPredicted RBP16.6■□□□□ 0.25
VARS2-207ENST00000476162 IRF5Q13568 498 aa16.6■□□□□ 0.25
VARS2-207ENST00000476162 KCNJ11Q14654 390 aa16.6■□□□□ 0.25
VARS2-207ENST00000476162 DENND1AQ8TEH3 1009 aa16.6■□□□□ 0.25
VARS2-207ENST00000476162 FAF2Q96CS3 445 aa16.6■□□□□ 0.25
VARS2-207ENST00000476162 ZNF670Q9BS34 389 aa16.6■□□□□ 0.25
VARS2-207ENST00000476162 AP5M1Q9H0R1 490 aa16.6■□□□□ 0.25
VARS2-207ENST00000476162 ACSS3Q9H6R3 686 aa16.6■□□□□ 0.25
VARS2-207ENST00000476162 RAB6BQ9NRW1 208 aa16.6■□□□□ 0.25
VARS2-207ENST00000476162 SENP1Q9P0U3 644 aa16.6■□□□□ 0.25
VARS2-207ENST00000476162 C17orf102A2RUQ5 167 aa16.6■□□□□ 0.25
VARS2-207ENST00000476162 TAC1P20366 129 aa16.6■□□□□ 0.25
VARS2-207ENST00000476162 RPA3P35244 121 aaPredicted RBP16.6■□□□□ 0.25
VARS2-207ENST00000476162 PNPLA4P41247 253 aa16.6■□□□□ 0.25
VARS2-207ENST00000476162 ELK3P41970 407 aa16.6■□□□□ 0.25
VARS2-207ENST00000476162 PTPN9P43378 593 aa16.6■□□□□ 0.25
VARS2-207ENST00000476162 CST9Q5W186 159 aa16.6■□□□□ 0.25
VARS2-207ENST00000476162 TRPM8Q7Z2W7 1104 aa16.6■□□□□ 0.25
VARS2-207ENST00000476162 SMG8Q8ND04 991 aaKnown RBP16.6■□□□□ 0.25
VARS2-207ENST00000476162 CENPIQ92674 756 aaPredicted RBP16.6■□□□□ 0.25
VARS2-207ENST00000476162 PAFAH2Q99487 392 aa16.6■□□□□ 0.25
VARS2-207ENST00000476162 DHX35Q9H5Z1 703 aaKnown RBP16.6■□□□□ 0.25
VARS2-207ENST00000476162 PAK5Q9P286 719 aa16.6■□□□□ 0.25
VARS2-207ENST00000476162 FETUBQ9UGM5 382 aa16.6■□□□□ 0.25
VARS2-207ENST00000476162 L3MBTL1Q9Y468 752 aa16.6■□□□□ 0.25
VARS2-207ENST00000476162 ZNF236Q9UL36 1845 aa16.59■□□□□ 0.25
VARS2-207ENST00000476162 DCAF8L1A6NGE4 600 aa16.59■□□□□ 0.25
VARS2-207ENST00000476162 A6NHS1 94 aa16.59■□□□□ 0.25
VARS2-207ENST00000476162 AVILO75366 819 aa16.59■□□□□ 0.25
VARS2-207ENST00000476162 ZBED1O96006 694 aa16.59■□□□□ 0.25
VARS2-207ENST00000476162 LINGO3P0C6S8 592 aa16.59■□□□□ 0.25
VARS2-207ENST00000476162 CYP2F1P24903 491 aa16.59■□□□□ 0.25
VARS2-207ENST00000476162 TKTP29401 623 aaKnown RBP16.59■□□□□ 0.25
VARS2-207ENST00000476162 L1CAMP32004 1257 aa16.59■□□□□ 0.25
VARS2-207ENST00000476162 RPL34P49207 117 aaKnown RBP16.59■□□□□ 0.25
VARS2-207ENST00000476162 KLHL38Q2WGJ6 581 aa16.59■□□□□ 0.25
VARS2-207ENST00000476162 ADGRD1Q6QNK2 874 aa16.59■□□□□ 0.25
VARS2-207ENST00000476162 VSIG1Q86XK7 387 aa16.59■□□□□ 0.25
VARS2-207ENST00000476162 ADGRF2Q8IZF7 708 aa16.59■□□□□ 0.25
VARS2-207ENST00000476162 DHRS4Q9BTZ2 278 aa16.59■□□□□ 0.25
VARS2-207ENST00000476162 YIPF3Q9GZM5 350 aa16.59■□□□□ 0.25
VARS2-207ENST00000476162 NRDE2Q9H7Z3 1164 aa16.59■□□□□ 0.25
VARS2-207ENST00000476162 RRAGCQ9HB90 399 aa16.59■□□□□ 0.25
VARS2-207ENST00000476162 ABCF3Q9NUQ8 709 aa16.59■□□□□ 0.25
VARS2-207ENST00000476162 SMG5Q9UPR3 1016 aaKnown RBP16.59■□□□□ 0.25
VARS2-207ENST00000476162 BCLAF3A2AJT9 711 aaKnown RBP16.58■□□□□ 0.25
VARS2-207ENST00000476162 CHADO15335 359 aa16.58■□□□□ 0.25
VARS2-207ENST00000476162 HUS1O60921 280 aa16.58■□□□□ 0.25
VARS2-207ENST00000476162 SUN1O94901 812 aa16.58■□□□□ 0.25
VARS2-207ENST00000476162 KRT4P19013 534 aa16.58■□□□□ 0.25
VARS2-207ENST00000476162 SLC18A1P54219 525 aa16.58■□□□□ 0.25
VARS2-207ENST00000476162 HUNKP57058 714 aa16.58■□□□□ 0.25
VARS2-207ENST00000476162 LILRA4P59901 499 aa16.58■□□□□ 0.25
VARS2-207ENST00000476162 BLMHQ13867 455 aa16.58■□□□□ 0.25
VARS2-207ENST00000476162 TAF1CQ15572 869 aaPredicted RBP16.58■□□□□ 0.25
VARS2-207ENST00000476162 DPYSL2Q16555 572 aa16.58■□□□□ 0.25
VARS2-207ENST00000476162 SV2CQ496J9 727 aa16.58■□□□□ 0.25
VARS2-207ENST00000476162 FAXCQ5TGI0 409 aa16.58■□□□□ 0.25
VARS2-207ENST00000476162 LIMS2Q7Z4I7 341 aa16.58■□□□□ 0.25
VARS2-207ENST00000476162 SPATA21Q7Z572 469 aa16.58■□□□□ 0.25
VARS2-207ENST00000476162 RTP4Q96DX8 246 aa16.58■□□□□ 0.25
VARS2-207ENST00000476162 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.58■□□□□ 0.25
VARS2-207ENST00000476162 GGT7Q9UJ14 662 aa16.58■□□□□ 0.25
VARS2-207ENST00000476162 TYROBPO43914 113 aa16.58■□□□□ 0.24
VARS2-207ENST00000476162 RTN3O95197 1032 aaPredicted RBP16.58■□□□□ 0.24
VARS2-207ENST00000476162 CA4P22748 312 aa16.58■□□□□ 0.24
VARS2-207ENST00000476162 CDC25CP30307 473 aa16.58■□□□□ 0.24
VARS2-207ENST00000476162 GBE1Q04446 702 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms