RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 MON1AQ86VX9 555 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 SLC13A5Q86YT5 568 aaPredicted RBP12.76□□□□□ -0.37
MRPL55-227ENST00000475832 ATAD1Q8NBU5 361 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 ZNF461Q8TAF7 563 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 RNF139Q8WU17 664 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 TEKT4Q8WW24 435 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 KHSRPQ92945 711 aaKnown RBP eCLIP12.76□□□□□ -0.37
MRPL55-227ENST00000475832 SAMD11Q96NU1 681 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 EMILIN2Q9BXX0 1053 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 MAK16Q9BXY0 300 aaKnown RBP12.76□□□□□ -0.37
MRPL55-227ENST00000475832 OSBPL8Q9BZF1 889 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 FAM204AQ9H8W3 233 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 ARGLU1Q9NWB6 273 aaPredicted RBP12.76□□□□□ -0.37
MRPL55-227ENST00000475832 FNIP2Q9P278 1114 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 LZTS1Q9Y250 596 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 YJEFN3A6XGL0 299 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 PRR33A8MZF0 331 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 E7ENQ6 273 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 C5orf67F2Z3F1 127 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 M0QYT0 321 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 TNFRSF10BO14763 440 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 CTSAP10619 480 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 RALAP11233 206 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 YWHAQP27348 245 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 PTPN7P35236 360 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 BMPR1AP36894 532 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 NHLH1Q02575 133 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 DUSP4Q13115 394 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 PLD1Q13393 1074 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 RAB33AQ14088 237 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 ERCC6LQ2NKX8 1250 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 FNDC1Q4ZHG4 1894 aaPredicted RBP12.75□□□□□ -0.37
MRPL55-227ENST00000475832 TFDP3Q5H9I0 405 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 BSPRYQ5W0U4 402 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 SPOCD1Q6ZMY3 1216 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 GPRIN1Q7Z2K8 1008 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 TMC7Q7Z402 723 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 MAATS1Q7Z4T9 603 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 TADA2BQ86TJ2 420 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 CPNE8Q86YQ8 564 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 PSTKQ8IV42 348 aaKnown RBP12.75□□□□□ -0.37
MRPL55-227ENST00000475832 PDZD8Q8NEN9 1154 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 SLC7A14Q8TBB6 771 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 ARNTL2Q8WYA1 636 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 HSPH1Q92598 858 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 RUBCNQ92622 972 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 CENPIQ92674 756 aaPredicted RBP12.75□□□□□ -0.37
MRPL55-227ENST00000475832 FBXO32Q969P5 355 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 RNF25Q96BH1 459 aaPredicted RBP12.75□□□□□ -0.37
MRPL55-227ENST00000475832 SLITRK1Q96PX8 696 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 CDK5RAP1Q96SZ6 601 aaKnown RBP12.75□□□□□ -0.37
MRPL55-227ENST00000475832 C17orf80Q9BSJ5 609 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 VN1R3Q9BXE9 311 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 AP1M1Q9BXS5 423 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 SLITRK6Q9H5Y7 841 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 CERS4Q9HA82 394 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.75□□□□□ -0.37
MRPL55-227ENST00000475832 FEZ2Q9UHY8 353 aaPredicted RBP12.75□□□□□ -0.37
MRPL55-227ENST00000475832 SCML2Q9UQR0 700 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 EFR3BQ9Y2G0 817 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 SLC27A5Q9Y2P5 690 aa12.75□□□□□ -0.37
MRPL55-227ENST00000475832 V9GYY5 206 aaPredicted RBP12.75□□□□□ -0.37
MRPL55-227ENST00000475832 WDR27A2RRH5 827 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 TARSL2A2RTX5 802 aaKnown RBP12.74□□□□□ -0.37
MRPL55-227ENST00000475832 PRRG1O14668 218 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 FSCN2O14926 492 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 MDM4O15151 490 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 RB1P06400 928 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 ADH1AP07327 375 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 RARAP10276 462 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 ATF2P15336 505 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 RPL17P18621 184 aaKnown RBP12.74□□□□□ -0.37
MRPL55-227ENST00000475832 CHRNA3P32297 505 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 UBE3AQ05086 875 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 NME3Q13232 169 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 TFDP2Q14188 446 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 EFHC2Q5JST6 749 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 ERMARDQ5T6L9 678 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 DAB2IPQ5VWQ8 1189 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 RSPO2Q6UXX9 243 aaPredicted RBP12.74□□□□□ -0.37
MRPL55-227ENST00000475832 VSIG1Q86XK7 387 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 KLHL7Q8IXQ5 586 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 KLHL23Q8NBE8 558 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 TTC13Q8NBP0 860 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 SCAMP5Q8TAC9 235 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.74□□□□□ -0.37
MRPL55-227ENST00000475832 NDRG1Q92597 394 aaKnown RBP12.74□□□□□ -0.37
MRPL55-227ENST00000475832 RNF34Q969K3 372 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 KRT12Q99456 494 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 NPY6RQ99463 290 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 CLSTN3Q9BQT9 956 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 CALN1Q9BXU9 219 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 FRMD8P1Q9BZ68 369 aaPredicted RBP12.74□□□□□ -0.37
MRPL55-227ENST00000475832 ZBP1Q9H171 429 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 CYP4F11Q9HBI6 524 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 RXFP1Q9HBX9 757 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 ENTPD7Q9NQZ7 604 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 TLR8Q9NR97 1041 aaKnown RBP12.74□□□□□ -0.37
MRPL55-227ENST00000475832 OLA1Q9NTK5 396 aaKnown RBP12.74□□□□□ -0.37
MRPL55-227ENST00000475832 RBM12Q9NTZ6 932 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms