RNA–Protein interactions for RNA: ENST00000475218.2

UPF3A-204, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best)

Gene UPF3A, Length 1,791 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-204ENST00000475218 APODP05090 189 aa14.82□□□□□ -0.04
UPF3A-204ENST00000475218 TRIM21P19474 475 aaKnown RBP14.82□□□□□ -0.04
UPF3A-204ENST00000475218 TNFRSF4P43489 277 aa14.82□□□□□ -0.04
UPF3A-204ENST00000475218 ATXN1P54253 815 aaKnown RBP14.82□□□□□ -0.04
UPF3A-204ENST00000475218 STIM1Q13586 685 aa14.82□□□□□ -0.04
UPF3A-204ENST00000475218 ANO4Q32M45 955 aa14.82□□□□□ -0.04
UPF3A-204ENST00000475218 PRR23CQ6ZRP0 262 aa14.82□□□□□ -0.04
UPF3A-204ENST00000475218 TOGARAM2Q6ZUX3 1019 aa14.82□□□□□ -0.04
UPF3A-204ENST00000475218 ARHGEF19Q8IW93 802 aa14.82□□□□□ -0.04
UPF3A-204ENST00000475218 ULBP1Q9BZM6 244 aa14.82□□□□□ -0.04
UPF3A-204ENST00000475218 ARRDC1-AS1Q9H2J1 176 aa14.82□□□□□ -0.04
UPF3A-204ENST00000475218 CD248Q9HCU0 757 aa14.82□□□□□ -0.04
UPF3A-204ENST00000475218 RXFP3Q9NSD7 469 aa14.82□□□□□ -0.04
UPF3A-204ENST00000475218 XPO1O14980 1071 aaKnown RBP14.81□□□□□ -0.04
UPF3A-204ENST00000475218 CCDC192P0DO97 292 aa14.81□□□□□ -0.04
UPF3A-204ENST00000475218 TYRP14679 529 aa14.81□□□□□ -0.04
UPF3A-204ENST00000475218 BCKDHBP21953 392 aa14.81□□□□□ -0.04
UPF3A-204ENST00000475218 PPP1R2P41236 205 aa14.81□□□□□ -0.04
UPF3A-204ENST00000475218 PLA2G4AP47712 749 aa14.81□□□□□ -0.04
UPF3A-204ENST00000475218 PSEN1P49768 467 aa14.81□□□□□ -0.04
UPF3A-204ENST00000475218 TKTL1P51854 596 aa14.81□□□□□ -0.04
UPF3A-204ENST00000475218 MARSP56192 900 aaKnown RBP14.81□□□□□ -0.04
UPF3A-204ENST00000475218 SF3A2Q15428 464 aaKnown RBP14.81□□□□□ -0.04
UPF3A-204ENST00000475218 PLA2G2CQ5R387 149 aa14.81□□□□□ -0.04
UPF3A-204ENST00000475218 ANO7Q6IWH7 933 aa14.81□□□□□ -0.04
UPF3A-204ENST00000475218 TERB1Q8NA31 727 aa14.81□□□□□ -0.04
UPF3A-204ENST00000475218 TSTD1Q8NFU3 115 aa14.81□□□□□ -0.04
UPF3A-204ENST00000475218 OLIG1Q8TAK6 271 aa14.81□□□□□ -0.04
UPF3A-204ENST00000475218 UBA3Q8TBC4 463 aa14.81□□□□□ -0.04
UPF3A-204ENST00000475218 LOXL4Q96JB6 756 aa14.81□□□□□ -0.04
UPF3A-204ENST00000475218 CNOT6LQ96LI5 555 aaKnown RBP14.81□□□□□ -0.04
UPF3A-204ENST00000475218 SMOC1Q9H4F8 434 aa14.81□□□□□ -0.04
UPF3A-204ENST00000475218 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.8□□□□□ -0.04
UPF3A-204ENST00000475218 PRRT4C9JH25 899 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 NEDD8-MDP1E9PL57 170 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 CISD3P0C7P0 127 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 DGKEP52429 567 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 BCAT1P54687 386 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 YWHAGP61981 247 aaKnown RBP eCLIP14.8□□□□□ -0.04
UPF3A-204ENST00000475218 EFEMP1Q12805 493 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 CCDC40Q4G0X9 1142 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 SGO2Q562F6 1265 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 TPGS1Q6ZTW0 290 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 DGLUCYQ7Z3D6 616 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 CCDC26Q8TAB7 109 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 KREMEN1Q96MU8 473 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 ACOX2Q99424 681 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 BBS2Q9BXC9 721 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 DEC1Q9P2X7 70 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 RASAL2Q9UJF2 1139 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 PLXND1Q9Y4D7 1925 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 PRR5-ARHGAP8B1AHC4 643 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 ZBED1O96006 694 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 VDRP11473 427 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 TBXAS1P24557 533 aaPredicted RBP14.8□□□□□ -0.04
UPF3A-204ENST00000475218 ZNF132P52740 706 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 ARHGAP8P85298 464 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 FOXK2Q01167 660 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 BST2Q10589 180 aaKnown RBP14.8□□□□□ -0.04
UPF3A-204ENST00000475218 PAK1Q13153 545 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 TMEM270Q6UE05 265 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 FRMD1Q8N878 549 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 BHMTQ93088 406 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 DNAJC17Q9NVM6 304 aaKnown RBP14.8□□□□□ -0.04
UPF3A-204ENST00000475218 FBXO10Q9UK96 956 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 AGO1Q9UL18 857 aaKnown RBP14.8□□□□□ -0.04
UPF3A-204ENST00000475218 STARD13Q9Y3M8 1113 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 SPTBN2O15020 2390 aa14.8□□□□□ -0.04
UPF3A-204ENST00000475218 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.79□□□□□ -0.04
UPF3A-204ENST00000475218 A0A1W2PQF6 199 aa14.79□□□□□ -0.04
UPF3A-204ENST00000475218 TBC1D3BA6NDS4 549 aa14.79□□□□□ -0.04
UPF3A-204ENST00000475218 YJEFN3A6XGL0 299 aa14.79□□□□□ -0.04
UPF3A-204ENST00000475218 E7ENQ6 273 aa14.79□□□□□ -0.04
UPF3A-204ENST00000475218 PENKP01210 267 aaPredicted RBP14.79□□□□□ -0.04
UPF3A-204ENST00000475218 HMBSP08397 361 aa14.79□□□□□ -0.04
UPF3A-204ENST00000475218 RALAP11233 206 aa14.79□□□□□ -0.04
UPF3A-204ENST00000475218 CD19P15391 556 aa14.79□□□□□ -0.04
UPF3A-204ENST00000475218 ADIGQ0VDE8 80 aa14.79□□□□□ -0.04
UPF3A-204ENST00000475218 KCNH2Q12809 1159 aa14.79□□□□□ -0.04
UPF3A-204ENST00000475218 CAMK4Q16566 473 aa14.79□□□□□ -0.04
UPF3A-204ENST00000475218 HSF5Q4G112 596 aaPredicted RBP14.79□□□□□ -0.04
UPF3A-204ENST00000475218 C10orf76Q5T2E6 689 aa14.79□□□□□ -0.04
UPF3A-204ENST00000475218 FYB2Q5VWT5 728 aa14.79□□□□□ -0.04
UPF3A-204ENST00000475218 BTBD8Q5XKL5 378 aa14.79□□□□□ -0.04
UPF3A-204ENST00000475218 EGFLAMQ63HQ2 1017 aa14.79□□□□□ -0.04
UPF3A-204ENST00000475218 LCLAT1Q6UWP7 414 aa14.79□□□□□ -0.04
UPF3A-204ENST00000475218 RRAGAQ7L523 313 aa14.79□□□□□ -0.04
UPF3A-204ENST00000475218 PPM1KQ8N3J5 372 aa14.79□□□□□ -0.04
UPF3A-204ENST00000475218 SLC35F5Q8WV83 523 aa14.79□□□□□ -0.04
UPF3A-204ENST00000475218 KCTD13Q8WZ19 329 aa14.79□□□□□ -0.04
UPF3A-204ENST00000475218 NT5C1BQ96P26 610 aa14.79□□□□□ -0.04
UPF3A-204ENST00000475218 SRRTQ9BXP5 876 aaKnown RBP14.79□□□□□ -0.04
UPF3A-204ENST00000475218 DNAI2Q9GZS0 605 aa14.79□□□□□ -0.04
UPF3A-204ENST00000475218 PLK2Q9NYY3 685 aa14.79□□□□□ -0.04
UPF3A-204ENST00000475218 MARCH2Q9P0N8 246 aa14.79□□□□□ -0.04
UPF3A-204ENST00000475218 LSM7Q9UK45 103 aaKnown RBP14.79□□□□□ -0.04
UPF3A-204ENST00000475218 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.79□□□□□ -0.04
UPF3A-204ENST00000475218 NUP205Q92621 2012 aa14.79□□□□□ -0.04
UPF3A-204ENST00000475218 TNRC6BQ9UPQ9 1833 aaKnown RBP14.79□□□□□ -0.04
UPF3A-204ENST00000475218 THADAQ6YHU6 1953 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms