RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 TDHQ8IZJ6 230 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 DEFB106AQ8N104 65 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 NUP93Q8N1F7 819 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 SIX6OS1Q8N1H7 587 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 PRELID2Q8N945 189 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 EIF1ADQ8N9N8 165 aaKnown RBP6.91□□□□□ -1.3
ATG4A-207ENST00000474825 MAIP1Q8WWC4 291 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 SEC14L1Q92503 715 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 TSC1Q92574 1164 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 SLCO2A1Q92959 643 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 NTAN1Q96AB6 310 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 FAF2Q96CS3 445 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 TMEM169Q96HH4 297 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 SLITRK1Q96PX8 696 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 PEBP4Q96S96 227 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 YME1L1Q96TA2 773 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 TRIM62Q9BVG3 475 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 RHOBTB2Q9BYZ6 727 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 OSBPL8Q9BZF1 889 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 CRISPLD1Q9H336 500 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 SLITRK6Q9H5Y7 841 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 LRRC19Q9H756 370 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 ANKZF1Q9H8Y5 726 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 PRDM16Q9HAZ2 1276 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.91□□□□□ -1.3
ATG4A-207ENST00000474825 RBM12Q9NTZ6 932 aaKnown RBP6.91□□□□□ -1.3
ATG4A-207ENST00000474825 SMARCAL1Q9NZC9 954 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 CALCOCO1Q9P1Z2 691 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 USP18Q9UMW8 372 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 LZTS1Q9Y250 596 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 NR2E1Q9Y466 385 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 TRIOBPQ9H2D6 2365 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 NLRC5Q86WI3 1866 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 VWA8A3KMH1 1905 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 ALPK3Q96L96 1907 aa6.91□□□□□ -1.3
ATG4A-207ENST00000474825 PTPRDP23468 1912 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 hCG_1818297A0A087WSY0 165 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 WDR27A2RRH5 827 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 PIK3R2O00459 728 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 ADAM12O43184 909 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 RTN3O95197 1032 aaPredicted RBP6.9□□□□□ -1.3
ATG4A-207ENST00000474825 F9P00740 461 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 LTFP02788 710 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 USP17L7P0C7H9 530 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 ATF2P15336 505 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 H2AFXP16104 143 aaPredicted RBP6.9□□□□□ -1.3
ATG4A-207ENST00000474825 TFE3P19532 575 aaPredicted RBP6.9□□□□□ -1.3
ATG4A-207ENST00000474825 KDELR1P24390 212 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 IL4RP24394 825 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 GRIK1P39086 918 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 CETN2P41208 172 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 TUFMP49411 452 aaKnown RBP6.9□□□□□ -1.3
ATG4A-207ENST00000474825 GLUD2P49448 558 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 SMCPP49901 116 aaPredicted RBP6.9□□□□□ -1.3
ATG4A-207ENST00000474825 RPL10AP62906 217 aaKnown RBP6.9□□□□□ -1.3
ATG4A-207ENST00000474825 ROR1Q01973 937 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 CREMQ03060 361 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 UBE3AQ05086 875 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 NAA30Q147X3 362 aaPredicted RBP6.9□□□□□ -1.3
ATG4A-207ENST00000474825 PDK2Q15119 407 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 PSMD5Q16401 504 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 DPYSL2Q16555 572 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 CCNG2Q16589 344 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 LONRF2Q1L5Z9 754 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 C15orf59Q2T9L4 293 aaPredicted RBP6.9□□□□□ -1.3
ATG4A-207ENST00000474825 TFDP3Q5H9I0 405 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 PLA2G2CQ5R387 149 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 SH3PXD2AQ5TCZ1 1133 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 SNX30Q5VWJ9 437 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 DAB2IPQ5VWQ8 1189 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 SYPL2Q5VXT5 272 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 BSPRYQ5W0U4 402 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 MSANTD2Q6P1R3 559 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 LILRA6Q6PI73 481 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 PRSS55Q6UWB4 352 aaPredicted RBP6.9□□□□□ -1.3
ATG4A-207ENST00000474825 MFSD7Q6UXD7 560 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 SPOCD1Q6ZMY3 1216 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 HFE2Q6ZVN8 426 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 MON1AQ86VX9 555 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 CEP57Q86XR8 500 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 ARHGAP18Q8N392 663 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 FIBCD1Q8N539 461 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 ATAD1Q8NBU5 361 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 SCAMP5Q8TAC9 235 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 ZNF461Q8TAF7 563 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 FAM172AQ8WUF8 416 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 RIN2Q8WYP3 895 aaPredicted RBP6.9□□□□□ -1.3
ATG4A-207ENST00000474825 RAPGEF5Q92565 580 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 NDRG1Q92597 394 aaKnown RBP6.9□□□□□ -1.3
ATG4A-207ENST00000474825 B3GALT6Q96L58 329 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 MYRFLQ96LU7 910 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 CFAP57Q96MR6 1250 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 RUNDC3BQ96NL0 473 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 HERPUD2Q9BSE4 406 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 FRMD8P1Q9BZ68 369 aaPredicted RBP6.9□□□□□ -1.3
ATG4A-207ENST00000474825 ZBP1Q9H171 429 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 FBXO44Q9H4M3 255 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 WDR6Q9NNW5 1121 aaKnown RBP6.9□□□□□ -1.3
ATG4A-207ENST00000474825 HOMER3Q9NSC5 361 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 ABCC13Q9NSE7 274 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms