RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 NR1H2P55055 460 aa19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 EIF3EP60228 445 aaKnown RBP19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 LGSNQ5TDP6 509 aa19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 PPP1R2P3Q6NXS1 205 aa19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 POLNQ7Z5Q5 900 aa19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 SP8Q8IXZ3 490 aa19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 RIN3Q8TB24 985 aa19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 DDI1Q8WTU0 396 aa19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 ZNF606Q8WXB4 792 aa19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 GFM2Q969S9 779 aaKnown RBP19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 PLAC1Q9HBJ0 212 aa19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 PCDH18Q9HCL0 1135 aa19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 VNN1O95497 513 aa19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 CALB1P05937 261 aa19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 CD97P48960 835 aa19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 SLC25A11Q02978 314 aaKnown RBP19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 RARS2Q5T160 578 aaKnown RBP19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 TEDDM1Q5T9Z0 273 aa19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 ADGRF2Q8IZF7 708 aa19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 BSNDQ8WZ55 320 aa19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 KMT5AQ9NQR1 393 aa19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 PAIP2BQ9ULR5 123 aaKnown RBP19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 PTPRJQ12913 1337 aa19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 HMX2A2RU54 273 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 BOLA2-SMG1P6H3BVE0 249 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 GSRP00390 522 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 C4BPAP04003 597 aaKnown RBP19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 FAM58BPP0C7Q3 252 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 CSH1P0DML2 217 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 CSH2P0DML3 217 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 RBP3P10745 1247 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 CLCN2P51788 898 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 YWHAZP63104 245 aaKnown RBP19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 FASTKD1Q53R41 847 aaKnown RBP19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 C6orf52Q5T4I8 152 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 MROH9Q5TGP6 573 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 PDPK2PQ6A1A2 396 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 AMIGO2Q86SJ2 522 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 NIPA2Q8N8Q9 360 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 ZDHHC15Q96MV8 337 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 FAIMQ9NVQ4 179 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 THEGQ9P2T0 379 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 PACSIN3Q9UKS6 424 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 HEMK1Q9Y5R4 338 aaPredicted RBP19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 SPDYE2BA6NHP3 402 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 SPDYE6P0CI01 402 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 PRKCHP24723 683 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 CREB5Q02930 508 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 MPP3Q13368 585 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 SPDYE2Q495Y8 402 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 MBLAC2Q68D91 279 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 PHTF2Q8N3S3 785 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 XPNPEP1Q9NQW7 623 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 SLC9A2Q9UBY0 812 aa19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 ZC3H7BQ9UGR2 993 aaKnown RBP19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 GNEQ9Y223 722 aaKnown RBP19.25■□□□□ 0.67
ECHDC1-214ENST00000474289 A0A1B0GTW7 788 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 E9PBE3 544 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 MCF2LO15068 1137 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 KRT38O76015 456 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 LYPLA2O95372 231 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 KDELR1P24390 212 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 ALDH1B1P30837 517 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 IDH3AP50213 366 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 SOX10P56693 466 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 SLC44A4Q53GD3 710 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 XKR9Q5GH70 373 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 TICAM1Q8IUC6 712 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 BBS5Q8N3I7 341 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 ARFGAP1Q8N6T3 406 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 SMYD1Q8NB12 490 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 APBB2Q92870 758 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 KCNK16Q96T55 309 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 DBNDD1Q9H9R9 158 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 IFT122Q9HBG6 1241 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 POPDC2Q9HBU9 364 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 TBCCD1Q9NVR7 557 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 LRRC37AA6NMS7 1700 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 FAM189A1O60320 539 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 ACAT1P24752 427 aaKnown RBP19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 SLC1A6P48664 564 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 CLDN10P78369 228 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 CYP4A22Q5TCH4 519 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 ATG14Q6ZNE5 492 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 CNKSR2Q8WXI2 1034 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 FAF2Q96CS3 445 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 LRGUKQ96M69 825 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 TUBGCP4Q9UGJ1 667 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 CNTN6Q9UQ52 1028 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 ZNF711Q9Y462 761 aa19.24■□□□□ 0.67
ECHDC1-214ENST00000474289 G3V3G9 751 aa19.23■□□□□ 0.67
ECHDC1-214ENST00000474289 APOC4-APOC2K7ER74 178 aa19.23■□□□□ 0.67
ECHDC1-214ENST00000474289 LRCH4O75427 683 aa19.23■□□□□ 0.67
ECHDC1-214ENST00000474289 APOC2P02655 101 aa19.23■□□□□ 0.67
ECHDC1-214ENST00000474289 FGF3P11487 239 aaPredicted RBP19.23■□□□□ 0.67
ECHDC1-214ENST00000474289 NCF2P19878 526 aaPredicted RBP19.23■□□□□ 0.67
ECHDC1-214ENST00000474289 RPL10AP62906 217 aaKnown RBP19.23■□□□□ 0.67
ECHDC1-214ENST00000474289 CDKL1Q00532 357 aa19.23■□□□□ 0.67
ECHDC1-214ENST00000474289 ADGRE1Q14246 886 aa19.23■□□□□ 0.67
ECHDC1-214ENST00000474289 TAZQ16635 292 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms