RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 MTCH2Q9Y6C9 303 aa7.97□□□□□ -1.13
CCDC93-207ENST00000474006 PTPRSQ13332 1948 aa7.96□□□□□ -1.13
CCDC93-207ENST00000474006 A0A0U1RQJ8 604 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 CAPN5O15484 640 aaPredicted RBP7.96□□□□□ -1.14
CCDC93-207ENST00000474006 RFPL2O75678 378 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 FBXO21O94952 628 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 RTN3O95197 1032 aaPredicted RBP7.96□□□□□ -1.14
CCDC93-207ENST00000474006 CYP1A2P05177 515 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 CALB1P05937 261 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 USP17L7P0C7H9 530 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 TMEM253P0C7T8 217 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 MYBL1P10243 752 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 HMGA1P17096 107 aaKnown RBP7.96□□□□□ -1.14
CCDC93-207ENST00000474006 RRM1P23921 792 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 MPSTP25325 297 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 YWHAQP27348 245 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 SLC5A3P53794 718 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 RNASE9P60153 205 aaKnown RBP7.96□□□□□ -1.14
CCDC93-207ENST00000474006 MRPS5P82675 430 aaKnown RBP7.96□□□□□ -1.14
CCDC93-207ENST00000474006 SLC6A3Q01959 620 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 ADIGQ0VDE8 80 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 IFRD2Q12894 506 aaPredicted RBP7.96□□□□□ -1.14
CCDC93-207ENST00000474006 PLD1Q13393 1074 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 ADAM15Q13444 863 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 MAMLD1Q13495 774 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 KCNC3Q14003 757 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 TAF5Q15542 800 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 TAF12Q16514 161 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 PPM1LQ5SGD2 360 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 PM20D1Q6GTS8 502 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 ALKBH2Q6NS38 261 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 TMEM184AQ6ZMB5 413 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 DENND5BQ6ZUT9 1274 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 FAM183BPQ6ZVS7 135 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 XYLT1Q86Y38 959 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 SIX6OS1Q8N1H7 587 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 LINC00528Q8N1L1 170 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 EFHBQ8N7U6 833 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 C12orf76Q8N812 135 aaPredicted RBP7.96□□□□□ -1.14
CCDC93-207ENST00000474006 STKLD1Q8NE28 680 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 VN1R2Q8NFZ6 395 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 IPO4Q8TEX9 1081 aaKnown RBP7.96□□□□□ -1.14
CCDC93-207ENST00000474006 CLEC4CQ8WTT0 213 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 ATRIPQ8WXE1 791 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 ARHGEF26Q96DR7 871 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 ZNF512Q96ME7 567 aaPredicted RBP7.96□□□□□ -1.14
CCDC93-207ENST00000474006 ASB16Q96NS5 453 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 ULBP1Q9BZM6 244 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 LACRTQ9GZZ8 138 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 LUC7LQ9NQ29 371 aaKnown RBP7.96□□□□□ -1.14
CCDC93-207ENST00000474006 COMMD8Q9NX08 183 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 CNOT8Q9UFF9 292 aaKnown RBP7.96□□□□□ -1.14
CCDC93-207ENST00000474006 INTUQ9ULD6 942 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 STRIP2Q9ULQ0 834 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 MAGED2Q9UNF1 606 aaPredicted RBP7.96□□□□□ -1.14
CCDC93-207ENST00000474006 ZNF232Q9UNY5 417 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 SCML2Q9UQR0 700 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 PPP2R2CQ9Y2T4 447 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 YIPF1Q9Y548 306 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 ASB3Q9Y575 518 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 DUSP10Q9Y6W6 482 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 TRIP11Q15643 1979 aa7.96□□□□□ -1.14
CCDC93-207ENST00000474006 CCDC195A0A1B0GUA6 201 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 TCRBV5S1A1TA0A578 114 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 FAM92AA1XBS5 289 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 SIGLEC16A6NMB1 481 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 YJEFN3A6XGL0 299 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 E7ENQ6 273 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 GOLGA8SH3BPF8 625 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 CCL16O15467 120 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 LINC01565O15544 149 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 PJA2O43164 708 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 GJB6O95452 261 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 LRG1P02750 347 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 HNRNPA1P09651 372 aaKnown RBP eCLIP7.95□□□□□ -1.14
CCDC93-207ENST00000474006 CCDC175P0C221 793 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 CSH1P0DML2 217 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 CSH2P0DML3 217 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 KRT3P12035 628 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 PTPN2P17706 415 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 MAPK1P28482 360 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 PGFP49763 221 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 VAV2P52735 878 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 DAOAP59103 153 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 YWHAZP63104 245 aaKnown RBP7.95□□□□□ -1.14
CCDC93-207ENST00000474006 KIF5AQ12840 1032 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 TAF10Q12962 218 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 VEPH1Q14D04 833 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 EFHC1Q5JVL4 640 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 SH3PXD2AQ5TCZ1 1133 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 PLEKHA7Q6IQ23 1121 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 ELMSAN1Q6PJG2 1045 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 OLFML1Q6UWY5 402 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 Q7L0L9 218 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 SCD5Q86SK9 330 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 KIAA1328Q86T90 577 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 ITIH5Q86UX2 942 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 MON1AQ86VX9 555 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 ZDHHC17Q8IUH5 632 aa7.95□□□□□ -1.14
CCDC93-207ENST00000474006 ALDH16A1Q8IZ83 802 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms