RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 LMNB2Q03252 620 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 MTMR3Q13615 1198 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 DPYSL2Q16555 572 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 BNIPLQ7Z465 357 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 CRIPAKQ8N1N5 446 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 GPR62Q9BZJ7 368 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 ANLNQ9NQW6 1124 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 CNGB3Q9NQW8 809 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 KANSL3Q9P2N6 904 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 TMEM189-UBE2V1I3L0A0 370 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 IFRD2Q12894 506 aaPredicted RBP18.74■□□□□ 0.59
VARS2-206ENST00000473916 NOMO1Q15155 1222 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 ANKRD33Q7Z3H0 272 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 TMEM173Q86WV6 379 aaPredicted RBP18.74■□□□□ 0.59
VARS2-206ENST00000473916 MAP7D3Q8IWC1 876 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 FAM71DQ8N9W8 422 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 TTC13Q8NBP0 860 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 SLC7A14Q8TBB6 771 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.74■□□□□ 0.59
VARS2-206ENST00000473916 SEZ6LQ9BYH1 1024 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 PABPC3Q9H361 631 aaKnown RBP18.74■□□□□ 0.59
VARS2-206ENST00000473916 ELAC1Q9H777 363 aaKnown RBP18.74■□□□□ 0.59
VARS2-206ENST00000473916 DMAP1Q9NPF5 467 aaPredicted RBP18.74■□□□□ 0.59
VARS2-206ENST00000473916 MARCH5Q9NX47 278 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 WBP1LQ9NX94 342 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 ADAM21Q9UKJ8 722 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 LRFN2Q9ULH4 789 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 FZD10Q9ULW2 581 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 HEY1Q9Y5J3 304 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 I6L893 689 aaPredicted RBP18.73■□□□□ 0.59
VARS2-206ENST00000473916 OPA1O60313 960 aa18.73■□□□□ 0.59
VARS2-206ENST00000473916 TADA2AO75478 443 aa18.73■□□□□ 0.59
VARS2-206ENST00000473916 FBXO21O94952 628 aa18.73■□□□□ 0.59
VARS2-206ENST00000473916 LTFP02788 710 aa18.73■□□□□ 0.59
VARS2-206ENST00000473916 RBP3P10745 1247 aa18.73■□□□□ 0.59
VARS2-206ENST00000473916 NCAM1P13591 858 aa18.73■□□□□ 0.59
VARS2-206ENST00000473916 SLC11A1P49279 550 aa18.73■□□□□ 0.59
VARS2-206ENST00000473916 PGFP49763 221 aa18.73■□□□□ 0.59
VARS2-206ENST00000473916 SDHAF4Q5VUM1 108 aa18.73■□□□□ 0.59
VARS2-206ENST00000473916 HIBCHQ6NVY1 386 aaPredicted RBP18.73■□□□□ 0.59
VARS2-206ENST00000473916 CEP57Q86XR8 500 aa18.73■□□□□ 0.59
VARS2-206ENST00000473916 GOLGA6L1Q8N7Z2 621 aa18.73■□□□□ 0.59
VARS2-206ENST00000473916 NETO2Q8NC67 525 aa18.73■□□□□ 0.59
VARS2-206ENST00000473916 P3H4Q92791 437 aa18.73■□□□□ 0.59
VARS2-206ENST00000473916 FAF2Q96CS3 445 aa18.73■□□□□ 0.59
VARS2-206ENST00000473916 ZNF670Q9BS34 389 aa18.73■□□□□ 0.59
VARS2-206ENST00000473916 ETNK2Q9NVF9 386 aa18.73■□□□□ 0.59
VARS2-206ENST00000473916 CWC15Q9P013 229 aaKnown RBP18.73■□□□□ 0.59
VARS2-206ENST00000473916 APOL1O14791 398 aa18.73■□□□□ 0.59
VARS2-206ENST00000473916 GOT1P17174 413 aa18.73■□□□□ 0.59
VARS2-206ENST00000473916 GAD2Q05329 585 aa18.73■□□□□ 0.59
VARS2-206ENST00000473916 TFDP2Q14188 446 aa18.73■□□□□ 0.59
VARS2-206ENST00000473916 TERF2Q15554 542 aa18.73■□□□□ 0.59
VARS2-206ENST00000473916 VARS2Q5ST30 1063 aaKnown RBP18.73■□□□□ 0.59
VARS2-206ENST00000473916 SLC9A4Q6AI14 798 aa18.73■□□□□ 0.59
VARS2-206ENST00000473916 SPATA2LQ8IUW3 424 aaPredicted RBP18.73■□□□□ 0.59
VARS2-206ENST00000473916 PGLYRP2Q96PD5 576 aa18.73■□□□□ 0.59
VARS2-206ENST00000473916 PCDH9Q9HC56 1237 aa18.73■□□□□ 0.59
VARS2-206ENST00000473916 ABI2Q9NYB9 513 aaPredicted RBP18.73■□□□□ 0.59
VARS2-206ENST00000473916 ADAM28Q9UKQ2 775 aa18.73■□□□□ 0.59
VARS2-206ENST00000473916 COL4A4P53420 1690 aaPredicted RBP18.72■□□□□ 0.59
VARS2-206ENST00000473916 GOLGA6CA6NDK9 693 aa18.72■□□□□ 0.59
VARS2-206ENST00000473916 TBKBP1A7MCY6 615 aa18.72■□□□□ 0.59
VARS2-206ENST00000473916 DNALI1O14645 258 aaPredicted RBP18.72■□□□□ 0.59
VARS2-206ENST00000473916 CAPN9O14815 690 aa18.72■□□□□ 0.59
VARS2-206ENST00000473916 MCF2LO15068 1137 aa18.72■□□□□ 0.59
VARS2-206ENST00000473916 CAPN15O75808 1086 aa18.72■□□□□ 0.59
VARS2-206ENST00000473916 OAZ2O95190 189 aa18.72■□□□□ 0.59
VARS2-206ENST00000473916 GOLGA6DP0CG33 693 aa18.72■□□□□ 0.59
VARS2-206ENST00000473916 COL6A1P12109 1028 aa18.72■□□□□ 0.59
VARS2-206ENST00000473916 RDXP35241 583 aaKnown RBP18.72■□□□□ 0.59
VARS2-206ENST00000473916 GPR15P49685 360 aa18.72■□□□□ 0.59
VARS2-206ENST00000473916 GBE1Q04446 702 aa18.72■□□□□ 0.59
VARS2-206ENST00000473916 DEUP1Q05D60 604 aa18.72■□□□□ 0.59
VARS2-206ENST00000473916 SLC29A2Q14542 456 aa18.72■□□□□ 0.59
VARS2-206ENST00000473916 LRIG3Q6UXM1 1119 aa18.72■□□□□ 0.59
VARS2-206ENST00000473916 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.72■□□□□ 0.59
VARS2-206ENST00000473916 TTC9BQ8N6N2 239 aa18.72■□□□□ 0.59
VARS2-206ENST00000473916 VWCEQ96DN2 955 aa18.72■□□□□ 0.59
VARS2-206ENST00000473916 CSPG4P5Q96PW8 444 aa18.72■□□□□ 0.59
VARS2-206ENST00000473916 ZCWPW1Q9H0M4 648 aa18.72■□□□□ 0.59
VARS2-206ENST00000473916 CDC42EP4Q9H3Q1 356 aaKnown RBP18.72■□□□□ 0.59
VARS2-206ENST00000473916 CENPHQ9H3R5 247 aa18.72■□□□□ 0.59
VARS2-206ENST00000473916 GOLGA6AQ9NYA3 693 aa18.72■□□□□ 0.59
VARS2-206ENST00000473916 STAP1Q9ULZ2 295 aa18.72■□□□□ 0.59
VARS2-206ENST00000473916 USP3Q9Y6I4 520 aa18.72■□□□□ 0.59
VARS2-206ENST00000473916 KIAA0100Q14667 2235 aaKnown RBP18.72■□□□□ 0.59
VARS2-206ENST00000473916 RARGP13631 454 aa18.71■□□□□ 0.59
VARS2-206ENST00000473916 AMPD1P23109 780 aa18.71■□□□□ 0.59
VARS2-206ENST00000473916 PAX3P23760 479 aa18.71■□□□□ 0.59
VARS2-206ENST00000473916 RPL22P35268 128 aaKnown RBP18.71■□□□□ 0.59
VARS2-206ENST00000473916 GABPB1Q06547 395 aaPredicted RBP18.71■□□□□ 0.59
VARS2-206ENST00000473916 SLC10A2Q12908 348 aaPredicted RBP18.71■□□□□ 0.59
VARS2-206ENST00000473916 FAM171A1Q5VUB5 890 aa18.71■□□□□ 0.59
VARS2-206ENST00000473916 BCL7CQ8WUZ0 217 aaPredicted RBP18.71■□□□□ 0.59
VARS2-206ENST00000473916 RSAD2Q8WXG1 361 aa18.71■□□□□ 0.59
VARS2-206ENST00000473916 CRISPLD2Q9H0B8 497 aa18.71■□□□□ 0.59
VARS2-206ENST00000473916 WDR6Q9NNW5 1121 aaKnown RBP18.71■□□□□ 0.59
VARS2-206ENST00000473916 GOLGA8KD6RF30 607 aa18.71■□□□□ 0.59
VARS2-206ENST00000473916 H7C0C1 242 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms