RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 NUP93Q8N1F7 819 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 TERB1Q8NA31 727 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 LSM14AQ8ND56 463 aaKnown RBP9.89□□□□□ -0.83
VCL-204ENST00000472585 ZMIZ2Q8NF64 920 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 OR6B3Q8NGW1 331 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 FOXJ1Q92949 421 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 ZNF419Q96HQ0 510 aaPredicted RBP9.89□□□□□ -0.83
VCL-204ENST00000472585 KCNK17Q96T54 332 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 CDC6Q99741 560 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 SDCBP2Q9H190 292 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 OSER1Q9NX31 292 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 HSPBP1Q9NZL4 362 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 KIF3AQ9Y496 699 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 PCDHGA10Q9Y5H3 936 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 RAD54BQ9Y620 910 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 SPTA1P02549 2419 aa9.89□□□□□ -0.83
VCL-204ENST00000472585 FAM92AA1XBS5 289 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 CAPN8A6NHC0 703 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 CLIC2O15247 247 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 BMP15O95972 392 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 HOXB2P14652 356 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 NTSR1P30989 418 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 MYL6P60660 151 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 LSM11P83369 360 aaKnown RBP eCLIP9.88□□□□□ -0.83
VCL-204ENST00000472585 CEBPZQ03701 1054 aaKnown RBP9.88□□□□□ -0.83
VCL-204ENST00000472585 GRIK2Q13002 908 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 RABEP1Q15276 862 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 ANO4Q32M45 955 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 WDR72Q3MJ13 1102 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 BTBD8Q5XKL5 378 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 SDE2Q6IQ49 451 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 EPM2AIP1Q7L775 607 aaPredicted RBP9.88□□□□□ -0.83
VCL-204ENST00000472585 BRAPQ7Z569 592 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 WDR49Q8IV35 697 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 B3GALNT2Q8NCR0 500 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 RHBDD1Q8TEB9 315 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 IPO4Q8TEX9 1081 aaKnown RBP9.88□□□□□ -0.83
VCL-204ENST00000472585 FBXO32Q969P5 355 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 MRGPRX1Q96LB2 322 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 SLITRK1Q96PX8 696 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 SMOQ99835 787 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 GABRG3Q99928 467 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 KLF16Q9BXK1 252 aaPredicted RBP9.88□□□□□ -0.83
VCL-204ENST00000472585 SNX25Q9H3E2 840 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 PRDM16Q9HAZ2 1276 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 IL21RQ9HBE5 538 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 GMIPQ9P107 970 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 TBC1D14Q9P2M4 693 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 DEC1Q9P2X7 70 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 CCDC39Q9UFE4 941 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 SMC3Q9UQE7 1217 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 SLCO1B1Q9Y6L6 691 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 CABIN1Q9Y6J0 2220 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 KNL1Q8NG31 2342 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 PTPRQQ9UMZ3 2332 aa9.88□□□□□ -0.83
VCL-204ENST00000472585 MEI4A8MW99 385 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 A8MXQ7 604 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 KCNJ18B7U540 433 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 CER1O95813 267 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 TNNC2P02585 160 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 FAM163BP0C2L3 166 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 ATXN1LP0C7T5 689 aaKnown RBP9.87□□□□□ -0.83
VCL-204ENST00000472585 DLATP10515 647 aaKnown RBP9.87□□□□□ -0.83
VCL-204ENST00000472585 IRF1P10914 325 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 MATKP42679 507 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 CASP4P49662 377 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 SLC5A3P53794 718 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 ORC1Q13415 861 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 SNRNP35Q16560 246 aaKnown RBP9.87□□□□□ -0.83
VCL-204ENST00000472585 CCDC157Q569K6 752 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 HECTD3Q5T447 861 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 HTR3DQ70Z44 454 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 GPRIN1Q7Z2K8 1008 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 FUKQ8N0W3 1084 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 ZNF843Q8N446 348 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 ENGASEQ8NFI3 743 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 ZNF507Q8TCN5 953 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 CCDC127Q96BQ5 260 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 OTUB2Q96DC9 234 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 EPAS1Q99814 870 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 DUSP9Q99956 384 aaKnown RBP9.87□□□□□ -0.83
VCL-204ENST00000472585 GAREM1Q9H706 876 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 SMYD3Q9H7B4 428 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 TM7SF3Q9NS93 570 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 TOR4AQ9NXH8 423 aa9.87□□□□□ -0.83
VCL-204ENST00000472585 NXF1Q9UBU9 619 aaKnown RBP9.87□□□□□ -0.83
VCL-204ENST00000472585 A0A1B0GTW7 788 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 FAM149AA5PLN7 773 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 CYSRT1A8MQ03 144 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 HHLA1C9JL84 531 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 E9PAM4 449 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 MDM4O15151 490 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 FLRT2O43155 660 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 RRP8O43159 456 aaKnown RBP9.86□□□□□ -0.83
VCL-204ENST00000472585 EIF5BO60841 1220 aaKnown RBP9.86□□□□□ -0.83
VCL-204ENST00000472585 VNN1O95497 513 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 ZNF883P0CG24 379 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 HLA-EP13747 358 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 ITPKBP27987 946 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 CASP1P29466 404 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms