RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 AOC1P19801 751 aa14.86□□□□□ -0.03
BRCA1-211ENST00000472490 NUBP1P53384 320 aa14.86□□□□□ -0.03
BRCA1-211ENST00000472490 ARID5AQ03989 594 aa14.86□□□□□ -0.03
BRCA1-211ENST00000472490 EFEMP1Q12805 493 aa14.86□□□□□ -0.03
BRCA1-211ENST00000472490 EML3Q32P44 896 aa14.86□□□□□ -0.03
BRCA1-211ENST00000472490 TRIM68Q6AZZ1 485 aa14.86□□□□□ -0.03
BRCA1-211ENST00000472490 ERICH1Q86X53 443 aa14.86□□□□□ -0.03
BRCA1-211ENST00000472490 ADGRG2Q8IZP9 1017 aa14.86□□□□□ -0.03
BRCA1-211ENST00000472490 WDTC1Q8N5D0 677 aa14.86□□□□□ -0.03
BRCA1-211ENST00000472490 NDRG1Q92597 394 aaKnown RBP14.86□□□□□ -0.03
BRCA1-211ENST00000472490 EDEM1Q92611 657 aa14.86□□□□□ -0.03
BRCA1-211ENST00000472490 CPXM1Q96SM3 734 aa14.86□□□□□ -0.03
BRCA1-211ENST00000472490 ECT2Q9H8V3 914 aa14.86□□□□□ -0.03
BRCA1-211ENST00000472490 POPDC2Q9HBU9 364 aa14.86□□□□□ -0.03
BRCA1-211ENST00000472490 IFNKQ9P0W0 207 aa14.86□□□□□ -0.03
BRCA1-211ENST00000472490 CYTH4Q9UIA0 394 aa14.86□□□□□ -0.03
BRCA1-211ENST00000472490 NOCTQ9UK39 431 aaKnown RBP14.86□□□□□ -0.03
BRCA1-211ENST00000472490 NUDT5Q9UKK9 219 aa14.86□□□□□ -0.03
BRCA1-211ENST00000472490 HBS1LQ9Y450 684 aaKnown RBP14.86□□□□□ -0.03
BRCA1-211ENST00000472490 DOCK6Q96HP0 2047 aa14.86□□□□□ -0.03
BRCA1-211ENST00000472490 NUP210Q8TEM1 1887 aaPredicted RBP14.85□□□□□ -0.03
BRCA1-211ENST00000472490 SPECC1L-ADORA2AF8WAN1 911 aa14.85□□□□□ -0.03
BRCA1-211ENST00000472490 PAPSS1O43252 624 aaPredicted RBP14.85□□□□□ -0.03
BRCA1-211ENST00000472490 PDGFBP01127 241 aaPredicted RBP14.85□□□□□ -0.03
BRCA1-211ENST00000472490 MMEP08473 750 aa14.85□□□□□ -0.03
BRCA1-211ENST00000472490 IRF1P10914 325 aa14.85□□□□□ -0.03
BRCA1-211ENST00000472490 ARSAP15289 507 aa14.85□□□□□ -0.03
BRCA1-211ENST00000472490 CTHP32929 405 aa14.85□□□□□ -0.03
BRCA1-211ENST00000472490 MAGEA9P43362 315 aa14.85□□□□□ -0.03
BRCA1-211ENST00000472490 HARS2P49590 506 aaKnown RBP14.85□□□□□ -0.03
BRCA1-211ENST00000472490 YWHAZP63104 245 aaKnown RBP14.85□□□□□ -0.03
BRCA1-211ENST00000472490 UBXN2BQ14CS0 331 aa14.85□□□□□ -0.03
BRCA1-211ENST00000472490 RNF214Q8ND24 703 aa14.85□□□□□ -0.03
BRCA1-211ENST00000472490 PJA1Q8NG27 643 aa14.85□□□□□ -0.03
BRCA1-211ENST00000472490 PLD4Q96BZ4 506 aa14.85□□□□□ -0.03
BRCA1-211ENST00000472490 C18orf8Q96DM3 657 aa14.85□□□□□ -0.03
BRCA1-211ENST00000472490 PRRX2Q99811 253 aa14.85□□□□□ -0.03
BRCA1-211ENST00000472490 LTB4R2Q9NPC1 389 aa14.85□□□□□ -0.03
BRCA1-211ENST00000472490 HPS4Q9NQG7 708 aa14.85□□□□□ -0.03
BRCA1-211ENST00000472490 ASNSD1Q9NWL6 643 aa14.85□□□□□ -0.03
BRCA1-211ENST00000472490 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.85□□□□□ -0.038e-7■□□□□ 9.2
BRCA1-211ENST00000472490 GREB1Q4ZG55 1949 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 A0A1W2PQJ5 194 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 SLC12A8A0AV02 714 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 FAM170BA6NMN3 283 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 MDM4O15151 490 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 HSF2BPO75031 334 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 STC2O76061 302 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 AVPR2P30518 371 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 CHKAP35790 457 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 GABRB2P47870 512 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 PREPLQ4J6C6 727 aaPredicted RBP14.84□□□□□ -0.03
BRCA1-211ENST00000472490 SFMBT2Q5VUG0 894 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 NAA35Q5VZE5 725 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 CWF19L1Q69YN2 538 aaKnown RBP14.84□□□□□ -0.03
BRCA1-211ENST00000472490 OR6B2Q6IFH4 312 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 PPP1R2P3Q6NXS1 205 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 MSANTD2Q6P1R3 559 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 BBS7Q8IWZ6 715 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 TTC8Q8TAM2 541 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 CLEC4CQ8WTT0 213 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 BAP1Q92560 729 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 SERPINB11Q96P15 392 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 LINC00597Q9H2U6 94 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 TMEM51Q9NW97 253 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 AIPL1Q9NZN9 384 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 HCN4Q9Y3Q4 1203 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 PATJQ8NI35 1801 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 ITIH6Q6UXX5 1313 aa14.84□□□□□ -0.03
BRCA1-211ENST00000472490 LRRC53A6NM62 1247 aa14.83□□□□□ -0.04
BRCA1-211ENST00000472490 CYP1A1P04798 512 aaPredicted RBP14.83□□□□□ -0.04
BRCA1-211ENST00000472490 CD72P21854 359 aa14.83□□□□□ -0.04
BRCA1-211ENST00000472490 CORO1AP31146 461 aaKnown RBP14.83□□□□□ -0.04
BRCA1-211ENST00000472490 SCNN1AP37088 669 aa14.83□□□□□ -0.04
BRCA1-211ENST00000472490 PBX1P40424 430 aa14.83□□□□□ -0.04
BRCA1-211ENST00000472490 NSFP46459 744 aaKnown RBP14.83□□□□□ -0.04
BRCA1-211ENST00000472490 NOMO3P69849 1222 aa14.83□□□□□ -0.04
BRCA1-211ENST00000472490 FMO1Q01740 532 aa14.83□□□□□ -0.04
BRCA1-211ENST00000472490 SLC6A3Q01959 620 aa14.83□□□□□ -0.04
BRCA1-211ENST00000472490 RING1Q06587 406 aa14.83□□□□□ -0.04
BRCA1-211ENST00000472490 GRSF1Q12849 480 aaKnown RBP eCLIP14.83□□□□□ -0.04
BRCA1-211ENST00000472490 NNTQ13423 1086 aa14.83□□□□□ -0.04
BRCA1-211ENST00000472490 LRRC32Q14392 662 aa14.83□□□□□ -0.04
BRCA1-211ENST00000472490 DHCR24Q15392 516 aa14.83□□□□□ -0.04
BRCA1-211ENST00000472490 TRIP4Q15650 581 aaPredicted RBP14.83□□□□□ -0.04
BRCA1-211ENST00000472490 ASIC2Q16515 512 aa14.83□□□□□ -0.04
BRCA1-211ENST00000472490 PTPN20Q4JDL3 420 aa14.83□□□□□ -0.04
BRCA1-211ENST00000472490 IER5LQ5T953 404 aa14.83□□□□□ -0.04
BRCA1-211ENST00000472490 NUGGCQ68CJ6 796 aa14.83□□□□□ -0.04
BRCA1-211ENST00000472490 SLC26A9Q7LBE3 791 aa14.83□□□□□ -0.04
BRCA1-211ENST00000472490 UNC45BQ8IWX7 931 aa14.83□□□□□ -0.04
BRCA1-211ENST00000472490 SLC20A1Q8WUM9 679 aa14.83□□□□□ -0.04
BRCA1-211ENST00000472490 CPA5Q8WXQ8 436 aa14.83□□□□□ -0.04
BRCA1-211ENST00000472490 AGPAT1Q99943 283 aa14.83□□□□□ -0.04
BRCA1-211ENST00000472490 XPO4Q9C0E2 1151 aaKnown RBP14.83□□□□□ -0.04
BRCA1-211ENST00000472490 TTYH3Q9C0H2 523 aa14.83□□□□□ -0.04
BRCA1-211ENST00000472490 KCNH6Q9H252 994 aa14.83□□□□□ -0.04
BRCA1-211ENST00000472490 SEPT11Q9NVA2 429 aaKnown RBP14.83□□□□□ -0.04
BRCA1-211ENST00000472490 SFMBT1Q9UHJ3 866 aa14.83□□□□□ -0.04
BRCA1-211ENST00000472490 NDRG2Q9UN36 371 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms