RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 MIB1Q86YT6 1006 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 TRIM59Q8IWR1 403 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 TERB1Q8NA31 727 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 TXNDC5Q8NBS9 432 aaKnown RBP9.48□□□□□ -0.89
USF1-204ENST00000472217 MDGA1Q8NFP4 955 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 KAT5Q92993 513 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 LOXL4Q96JB6 756 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 ZC3H10Q96K80 434 aaKnown RBP9.48□□□□□ -0.89
USF1-204ENST00000472217 NT5C1BQ96P26 610 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 CDK5RAP1Q96SZ6 601 aaKnown RBP9.48□□□□□ -0.89
USF1-204ENST00000472217 BBS2Q9BXC9 721 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 UBXN6Q9BZV1 441 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 ARRDC1-AS1Q9H2J1 176 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 MARK1Q9P0L2 795 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 DEC1Q9P2X7 70 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 HESX1Q9UBX0 185 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 RASAL2Q9UJF2 1139 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 CDV3Q9UKY7 258 aaKnown RBP9.48□□□□□ -0.89
USF1-204ENST00000472217 INVSQ9Y283 1065 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 MYOFQ9NZM1 2061 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.47□□□□□ -0.89
USF1-204ENST00000472217 TBC1D3BA6NDS4 549 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 O00370 1275 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 CACNG3O60359 315 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 ADAM23O75077 832 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 ZBED1O96006 694 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 KLKB1P03952 638 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 HMBSP08397 361 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 VDRP11473 427 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 TYRP14679 529 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 SDHBP21912 280 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 ATXN1P54253 815 aaKnown RBP9.47□□□□□ -0.89
USF1-204ENST00000472217 YWHAGP61981 247 aaKnown RBP eCLIP9.47□□□□□ -0.89
USF1-204ENST00000472217 ADIGQ0VDE8 80 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 BST2Q10589 180 aaKnown RBP9.47□□□□□ -0.89
USF1-204ENST00000472217 EFEMP1Q12805 493 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 PAK1Q13153 545 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 SF3A2Q15428 464 aaKnown RBP9.47□□□□□ -0.89
USF1-204ENST00000472217 CCDC6Q16204 474 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 PREPLQ4J6C6 727 aaPredicted RBP9.47□□□□□ -0.89
USF1-204ENST00000472217 EOGTQ5NDL2 527 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 PM20D1Q6GTS8 502 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 GRAMD4Q6IC98 578 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 TMEM270Q6UE05 265 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 BHLHA9Q7RTU4 235 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 ARHGAP18Q8N392 663 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 PPM1KQ8N3J5 372 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 LMO3Q8TAP4 145 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 UBA3Q8TBC4 463 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 BHMTQ93088 406 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 CNOT6LQ96LI5 555 aaKnown RBP9.47□□□□□ -0.89
USF1-204ENST00000472217 ULBP1Q9BZM6 244 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 DUSP15Q9H1R2 295 aaPredicted RBP9.47□□□□□ -0.89
USF1-204ENST00000472217 DNAJC17Q9NVM6 304 aaKnown RBP9.47□□□□□ -0.89
USF1-204ENST00000472217 HCN2Q9UL51 889 aa9.47□□□□□ -0.89
USF1-204ENST00000472217 MED19A0JLT2 244 aaPredicted RBP9.46□□□□□ -0.9
USF1-204ENST00000472217 P4HA2O15460 535 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 GDF9O60383 454 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 FOXD2O60548 495 aaPredicted RBP9.46□□□□□ -0.9
USF1-204ENST00000472217 PAEPP09466 180 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 SETSIPP0DME0 302 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 GBP1P32455 592 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 MPLP40238 635 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 MARSP56192 900 aaKnown RBP9.46□□□□□ -0.9
USF1-204ENST00000472217 UBE2HP62256 183 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 COG7P83436 770 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 KCNH2Q12809 1159 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 ELF2Q15723 593 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 CAMK4Q16566 473 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 PKDCCQ504Y2 493 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 USP39Q53GS9 565 aaKnown RBP9.46□□□□□ -0.9
USF1-204ENST00000472217 TOGARAM2Q6ZUX3 1019 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 NUDT18Q6ZVK8 323 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 RSRC2Q7L4I2 434 aaKnown RBP9.46□□□□□ -0.9
USF1-204ENST00000472217 RRAGAQ7L523 313 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 ARHGEF19Q8IW93 802 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 ZNF513Q8N8E2 541 aaPredicted RBP9.46□□□□□ -0.9
USF1-204ENST00000472217 TRIML1Q8N9V2 468 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 OLIG1Q8TAK6 271 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 NETO1Q8TDF5 533 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 TFAP2BQ92481 460 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 NDRG1Q92597 394 aaKnown RBP9.46□□□□□ -0.9
USF1-204ENST00000472217 P2RY11Q96G91 374 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 XPO6Q96QU8 1125 aaKnown RBP9.46□□□□□ -0.9
USF1-204ENST00000472217 ZSWIM1Q9BR11 485 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 SRRTQ9BXP5 876 aaKnown RBP9.46□□□□□ -0.9
USF1-204ENST00000472217 SMOC1Q9H4F8 434 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 LRRC4Q9HBW1 653 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 POLMQ9NP87 494 aaPredicted RBP9.46□□□□□ -0.9
USF1-204ENST00000472217 PLK2Q9NYY3 685 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 MARCH2Q9P0N8 246 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 WDR35Q9P2L0 1181 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 KIAA1257Q9ULG3 409 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 PCDHB4Q9Y5E5 795 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 PCDHGA5Q9Y5G8 931 aa9.46□□□□□ -0.9
USF1-204ENST00000472217 FRYLO94915 3013 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 TCRBV21S2A2A0A5A6 115 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 SLC12A8A0AV02 714 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 DCDC2BA2VCK2 349 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 YJEFN3A6XGL0 299 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms