RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 GHRHRQ02643 423 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 STK3Q13188 491 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 MFSD13AQ14CX5 517 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 ACOX1Q15067 660 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 RBMS2Q15434 407 aaKnown RBP3.74□□□□□ -1.81
COPS3-206ENST00000471414 SHC4Q6S5L8 630 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 BHLHA9Q7RTU4 235 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 KRT28Q7Z3Y7 464 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 C14orf80Q86SX3 495 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 NANOGP1Q8N7R0 232 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 C11orf44Q8N8P7 122 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 SMCR8Q8TEV9 937 aaPredicted RBP3.74□□□□□ -1.81
COPS3-206ENST00000471414 IPCEF1Q8WWN9 437 aaPredicted RBP3.74□□□□□ -1.81
COPS3-206ENST00000471414 PHKBQ93100 1093 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 HIST1H2AAQ96QV6 131 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 WACQ9BTA9 647 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 GATA5Q9BWX5 397 aaPredicted RBP3.74□□□□□ -1.81
COPS3-206ENST00000471414 ZCWPW1Q9H0M4 648 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 AS3MTQ9HBK9 375 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 PRDM11Q9NQV5 511 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 VPS45Q9NRW7 570 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 GOLGA6AQ9NYA3 693 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 TCEAL9Q9UHQ7 104 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 ZMYM2Q9UBW7 1377 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 FOXN3O00409 490 aaPredicted RBP3.73□□□□□ -1.81
COPS3-206ENST00000471414 KCNQ3O43525 872 aa3.73□□□□□ -1.81
COPS3-206ENST00000471414 RNF8O76064 485 aa3.73□□□□□ -1.81
COPS3-206ENST00000471414 ANXA2P07355 339 aaKnown RBP3.73□□□□□ -1.81
COPS3-206ENST00000471414 LEXMQ3ZCV2 418 aa3.73□□□□□ -1.81
COPS3-206ENST00000471414 AASDHQ4L235 1098 aaPredicted RBP3.73□□□□□ -1.81
COPS3-206ENST00000471414 IRF2BP2Q7Z5L9 587 aa3.73□□□□□ -1.81
COPS3-206ENST00000471414 SDR16C5Q8N3Y7 309 aa3.73□□□□□ -1.81
COPS3-206ENST00000471414 RNF152Q8N8N0 203 aa3.73□□□□□ -1.81
COPS3-206ENST00000471414 SUN3Q8TAQ9 357 aa3.73□□□□□ -1.81
COPS3-206ENST00000471414 NUP62CLQ9H1M0 184 aa3.73□□□□□ -1.81
COPS3-206ENST00000471414 TMEM8AQ9HCN3 771 aa3.73□□□□□ -1.81
COPS3-206ENST00000471414 RXFP3Q9NSD7 469 aa3.73□□□□□ -1.81
COPS3-206ENST00000471414 ZNF212Q9UDV6 495 aa3.73□□□□□ -1.81
COPS3-206ENST00000471414 ITGB1BP2Q9UKP3 347 aa3.73□□□□□ -1.81
COPS3-206ENST00000471414 MAFFQ9ULX9 164 aa3.73□□□□□ -1.81
COPS3-206ENST00000471414 G3BP2Q9UN86 482 aaKnown RBP3.73□□□□□ -1.81
COPS3-206ENST00000471414 OR2W5A6NFC9 320 aa3.72□□□□□ -1.81
COPS3-206ENST00000471414 C16orf96A6NNT2 1141 aa3.72□□□□□ -1.81
COPS3-206ENST00000471414 RRHO14718 337 aa3.72□□□□□ -1.81
COPS3-206ENST00000471414 FYB1O15117 783 aa3.72□□□□□ -1.81
COPS3-206ENST00000471414 CA12O43570 354 aa3.72□□□□□ -1.81
COPS3-206ENST00000471414 WDR47O94967 919 aa3.72□□□□□ -1.81
COPS3-206ENST00000471414 TOMM40O96008 361 aa3.72□□□□□ -1.81
COPS3-206ENST00000471414 FGF2P09038 288 aa3.72□□□□□ -1.81
COPS3-206ENST00000471414 ARP10275 920 aa3.72□□□□□ -1.81
COPS3-206ENST00000471414 CCT4P50991 539 aaKnown RBP3.72□□□□□ -1.81
COPS3-206ENST00000471414 HSF1Q00613 529 aa3.72□□□□□ -1.81
COPS3-206ENST00000471414 DAG1Q14118 895 aa3.72□□□□□ -1.81
COPS3-206ENST00000471414 KCNJ12Q14500 433 aa3.72□□□□□ -1.81
COPS3-206ENST00000471414 ANO7Q6IWH7 933 aa3.72□□□□□ -1.81
COPS3-206ENST00000471414 CLEC9AQ6UXN8 241 aa3.72□□□□□ -1.81
COPS3-206ENST00000471414 ZNF517Q6ZMY9 492 aaPredicted RBP3.72□□□□□ -1.81
COPS3-206ENST00000471414 CUL5Q93034 780 aa3.72□□□□□ -1.81
COPS3-206ENST00000471414 AGO4Q9HCK5 861 aaKnown RBP3.72□□□□□ -1.81
COPS3-206ENST00000471414 MLXIPLQ9NP71 852 aa3.72□□□□□ -1.81
COPS3-206ENST00000471414 TMEM184CQ9NVA4 438 aa3.72□□□□□ -1.81
COPS3-206ENST00000471414 PCDHGB6Q9Y5F9 930 aa3.72□□□□□ -1.81
COPS3-206ENST00000471414 AREL1O15033 823 aa3.71□□□□□ -1.82
COPS3-206ENST00000471414 SNX2O60749 519 aa3.71□□□□□ -1.82
COPS3-206ENST00000471414 IL18RAPO95256 599 aa3.71□□□□□ -1.82
COPS3-206ENST00000471414 TMEM191BP0C7N4 346 aa3.71□□□□□ -1.82
COPS3-206ENST00000471414 TMEM225BP0DP42 221 aa3.71□□□□□ -1.82
COPS3-206ENST00000471414 GALNSP34059 522 aa3.71□□□□□ -1.82
COPS3-206ENST00000471414 RPS13P62277 151 aaKnown RBP3.71□□□□□ -1.82
COPS3-206ENST00000471414 YPEL5P62699 121 aa3.71□□□□□ -1.82
COPS3-206ENST00000471414 TXNL4AP83876 142 aaKnown RBP3.71□□□□□ -1.82
COPS3-206ENST00000471414 ID2Q02363 134 aa3.71□□□□□ -1.82
COPS3-206ENST00000471414 FAM90A2PQ658T7 463 aa3.71□□□□□ -1.82
COPS3-206ENST00000471414 ABLIM2Q6H8Q1 611 aa3.71□□□□□ -1.82
COPS3-206ENST00000471414 TFAP2DQ7Z6R9 452 aa3.71□□□□□ -1.82
COPS3-206ENST00000471414 NGDNQ8NEJ9 315 aaKnown RBP3.71□□□□□ -1.82
COPS3-206ENST00000471414 TIFAQ96CG3 184 aa3.71□□□□□ -1.82
COPS3-206ENST00000471414 PRR11Q96HE9 360 aaPredicted RBP3.71□□□□□ -1.82
COPS3-206ENST00000471414 HS6ST2Q96MM7 605 aa3.71□□□□□ -1.82
COPS3-206ENST00000471414 GDF15Q99988 308 aa3.71□□□□□ -1.82
COPS3-206ENST00000471414 TM2D2Q9BX73 214 aa3.71□□□□□ -1.82
COPS3-206ENST00000471414 SLC25A32Q9H2D1 315 aa3.71□□□□□ -1.82
COPS3-206ENST00000471414 SAP30LQ9HAJ7 183 aa3.71□□□□□ -1.82
COPS3-206ENST00000471414 HEY2Q9UBP5 337 aa3.71□□□□□ -1.82
COPS3-206ENST00000471414 INSIG1O15503 277 aa3.7□□□□□ -1.82
COPS3-206ENST00000471414 TMIGD3P0DMS9 266 aaPredicted RBP3.7□□□□□ -1.82
COPS3-206ENST00000471414 TSHRP16473 764 aa3.7□□□□□ -1.82
COPS3-206ENST00000471414 SLC5A2P31639 672 aa3.7□□□□□ -1.82
COPS3-206ENST00000471414 PIK3CBP42338 1070 aa3.7□□□□□ -1.82
COPS3-206ENST00000471414 PLCD1P51178 756 aa3.7□□□□□ -1.82
COPS3-206ENST00000471414 CASP5P51878 434 aa3.7□□□□□ -1.82
COPS3-206ENST00000471414 WDR5P61964 334 aaKnown RBP3.7□□□□□ -1.82
COPS3-206ENST00000471414 RAE1P78406 368 aaKnown RBP3.7□□□□□ -1.82
COPS3-206ENST00000471414 ZNF91Q05481 1191 aa3.7□□□□□ -1.82
COPS3-206ENST00000471414 ZNF543Q08ER8 600 aa3.7□□□□□ -1.82
COPS3-206ENST00000471414 CCDC15Q0P6D6 951 aa3.7□□□□□ -1.82
COPS3-206ENST00000471414 ZNF260Q3ZCT1 412 aa3.7□□□□□ -1.82
COPS3-206ENST00000471414 KIAA0408Q6ZU52 694 aa3.7□□□□□ -1.82
COPS3-206ENST00000471414 RNF44Q7L0R7 432 aa3.7□□□□□ -1.82
COPS3-206ENST00000471414 DGKHQ86XP1 1220 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms