RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 XPO6Q96QU8 1125 aaKnown RBP14.19□□□□□ -0.14
HMGN1-211ENST00000471260 ARID3AQ99856 593 aa14.19□□□□□ -0.14
HMGN1-211ENST00000471260 RTKNQ9BST9 563 aa14.19□□□□□ -0.14
HMGN1-211ENST00000471260 NMUR1Q9HB89 426 aa14.19□□□□□ -0.14
HMGN1-211ENST00000471260 MARK1Q9P0L2 795 aa14.19□□□□□ -0.14
HMGN1-211ENST00000471260 WDR35Q9P2L0 1181 aa14.19□□□□□ -0.14
HMGN1-211ENST00000471260 DEC1Q9P2X7 70 aa14.19□□□□□ -0.14
HMGN1-211ENST00000471260 HESX1Q9UBX0 185 aa14.19□□□□□ -0.14
HMGN1-211ENST00000471260 NAGPAQ9UK23 515 aa14.19□□□□□ -0.14
HMGN1-211ENST00000471260 DNAH14Q0VDD8 3507 aa14.19□□□□□ -0.14
HMGN1-211ENST00000471260 MYOFQ9NZM1 2061 aa14.19□□□□□ -0.14
HMGN1-211ENST00000471260 SPAG17Q6Q759 2223 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 CEP250Q9BV73 2442 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 TBC1D3BA6NDS4 549 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 PPP1R3GB7ZBB8 358 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 SCAMP3O14828 347 aaKnown RBP14.18□□□□□ -0.14
HMGN1-211ENST00000471260 XPO1O14980 1071 aaKnown RBP14.18□□□□□ -0.14
HMGN1-211ENST00000471260 ALDH1A2O94788 518 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 RHOBTB1O94844 696 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 EPN2O95208 641 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 IRF1P10914 325 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 VDRP11473 427 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 CD44P16070 742 aaKnown RBP14.18□□□□□ -0.14
HMGN1-211ENST00000471260 HOXC13P31276 330 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 BCAT1P54687 386 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 SEC13P55735 322 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 ELF2Q15723 593 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 ANO4Q32M45 955 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 CCDC40Q4G0X9 1142 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 USP39Q53GS9 565 aaKnown RBP14.18□□□□□ -0.14
HMGN1-211ENST00000471260 SGO2Q562F6 1265 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 EOGTQ5NDL2 527 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 PM20D1Q6GTS8 502 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 ISM2Q6H9L7 571 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 PRR23CQ6ZRP0 262 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 SCD5Q86SK9 330 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 PIGZQ86VD9 579 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 C12orf40Q86WS4 652 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 TMEM25Q86YD3 366 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 PHTF2Q8N3S3 785 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 TRIML1Q8N9V2 468 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 NETO1Q8TDF5 533 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 CNOT6LQ96LI5 555 aaKnown RBP14.18□□□□□ -0.14
HMGN1-211ENST00000471260 CLSTN2Q9H4D0 955 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 POLMQ9NP87 494 aaPredicted RBP14.18□□□□□ -0.14
HMGN1-211ENST00000471260 CDV3Q9UKY7 258 aaKnown RBP14.18□□□□□ -0.14
HMGN1-211ENST00000471260 STARD13Q9Y3M8 1113 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 MYO16Q9Y6X6 1858 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 KIAA1549LQ6ZVL6 1849 aa14.18□□□□□ -0.14
HMGN1-211ENST00000471260 CACNG3O60359 315 aa14.17□□□□□ -0.14
HMGN1-211ENST00000471260 TULP3O75386 442 aa14.17□□□□□ -0.14
HMGN1-211ENST00000471260 FGFR1OPO95684 399 aaKnown RBP14.17□□□□□ -0.14
HMGN1-211ENST00000471260 PAEPP09466 180 aa14.17□□□□□ -0.14
HMGN1-211ENST00000471260 BMP6P22004 513 aa14.17□□□□□ -0.14
HMGN1-211ENST00000471260 CHKAP35790 457 aa14.17□□□□□ -0.14
HMGN1-211ENST00000471260 MARSP56192 900 aaKnown RBP14.17□□□□□ -0.14
HMGN1-211ENST00000471260 BST2Q10589 180 aaKnown RBP14.17□□□□□ -0.14
HMGN1-211ENST00000471260 PLK5Q496M5 336 aa14.17□□□□□ -0.14
HMGN1-211ENST00000471260 Q6ZNB5 142 aa14.17□□□□□ -0.14
HMGN1-211ENST00000471260 KBTBD6Q86V97 674 aa14.17□□□□□ -0.14
HMGN1-211ENST00000471260 TTC30AQ86WT1 665 aa14.17□□□□□ -0.14
HMGN1-211ENST00000471260 SCML4Q8N228 414 aa14.17□□□□□ -0.14
HMGN1-211ENST00000471260 TERB1Q8NA31 727 aa14.17□□□□□ -0.14
HMGN1-211ENST00000471260 IL17RCQ8NAC3 791 aa14.17□□□□□ -0.14
HMGN1-211ENST00000471260 NELFBQ8WX92 580 aa14.17□□□□□ -0.14
HMGN1-211ENST00000471260 WBP2Q969T9 261 aa14.17□□□□□ -0.14
HMGN1-211ENST00000471260 NT5C1BQ96P26 610 aa14.17□□□□□ -0.14
HMGN1-211ENST00000471260 DCLK3Q9C098 648 aa14.17□□□□□ -0.14
HMGN1-211ENST00000471260 POLR3BQ9NW08 1133 aaPredicted RBP14.17□□□□□ -0.14
HMGN1-211ENST00000471260 TSPAN16Q9UKR8 245 aa14.17□□□□□ -0.14
HMGN1-211ENST00000471260 RALGAPA1Q6GYQ0 2036 aa14.16□□□□□ -0.14
HMGN1-211ENST00000471260 STC2O76061 302 aa14.16□□□□□ -0.14
HMGN1-211ENST00000471260 ZBED1O96006 694 aa14.16□□□□□ -0.14
HMGN1-211ENST00000471260 ZNF806P0C7X5 589 aa14.16□□□□□ -0.14
HMGN1-211ENST00000471260 SETSIPP0DME0 302 aa14.16□□□□□ -0.14
HMGN1-211ENST00000471260 CHRM1P11229 460 aaPredicted RBP14.16□□□□□ -0.14
HMGN1-211ENST00000471260 TIE1P35590 1138 aa14.16□□□□□ -0.14
HMGN1-211ENST00000471260 TKTL1P51854 596 aa14.16□□□□□ -0.14
HMGN1-211ENST00000471260 ATXN1P54253 815 aaKnown RBP14.16□□□□□ -0.14
HMGN1-211ENST00000471260 MESP2Q0VG99 397 aa14.16□□□□□ -0.14
HMGN1-211ENST00000471260 PAK1Q13153 545 aa14.16□□□□□ -0.14
HMGN1-211ENST00000471260 STILQ15468 1287 aa14.16□□□□□ -0.14
HMGN1-211ENST00000471260 KLHL10Q6JEL2 608 aa14.16□□□□□ -0.14
HMGN1-211ENST00000471260 MTERF4Q7Z6M4 381 aaKnown RBP14.16□□□□□ -0.14
HMGN1-211ENST00000471260 CCDC33Q8N5R6 958 aa14.16□□□□□ -0.14
HMGN1-211ENST00000471260 ALLCQ8N6M5 410 aa14.16□□□□□ -0.14
HMGN1-211ENST00000471260 UBR7Q8N806 425 aa14.16□□□□□ -0.14
HMGN1-211ENST00000471260 NAT16Q8N8M0 369 aa14.16□□□□□ -0.14
HMGN1-211ENST00000471260 TXNDC5Q8NBS9 432 aaKnown RBP14.16□□□□□ -0.14
HMGN1-211ENST00000471260 KCTD13Q8WZ19 329 aa14.16□□□□□ -0.14
HMGN1-211ENST00000471260 BBS2Q9BXC9 721 aa14.16□□□□□ -0.14
HMGN1-211ENST00000471260 DUSP15Q9H1R2 295 aaPredicted RBP14.16□□□□□ -0.14
HMGN1-211ENST00000471260 LRRC4Q9HBW1 653 aa14.16□□□□□ -0.14
HMGN1-211ENST00000471260 OLA1Q9NTK5 396 aaKnown RBP14.16□□□□□ -0.14
HMGN1-211ENST00000471260 NUDT5Q9UKK9 219 aa14.16□□□□□ -0.14
HMGN1-211ENST00000471260 STRIP2Q9ULQ0 834 aa14.16□□□□□ -0.14
HMGN1-211ENST00000471260 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.16□□□□□ -0.14
HMGN1-211ENST00000471260 FRYLO94915 3013 aa14.16□□□□□ -0.14
HMGN1-211ENST00000471260 NEDD8-MDP1E9PL57 170 aa14.15□□□□□ -0.14
HMGN1-211ENST00000471260 O00370 1275 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms