RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 MAGEB5Q9BZ81 275 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 USP3Q9Y6I4 520 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 ZNF638Q14966 1978 aaKnown RBP18.88■□□□□ 0.61
SMC4-211ENST00000469858 ABHD14A-ACY1A0A1B0GW23 586 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 APOC4-APOC2K7ER74 178 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 RRP9O43818 475 aaKnown RBP18.88■□□□□ 0.61
SMC4-211ENST00000469858 APOC2P02655 101 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 CPB1P15086 417 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 L1CAMP32004 1257 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 CTCFP49711 727 aaPredicted RBP18.88■□□□□ 0.61
SMC4-211ENST00000469858 CALCOCO2Q13137 446 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 TFDP2Q14188 446 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 OASLQ15646 514 aaKnown RBP18.88■□□□□ 0.61
SMC4-211ENST00000469858 ANKRD20A8PQ5CZ79 823 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 TAS1R1Q7RTX1 841 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 PRUNE1Q86TP1 453 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 ZNF670Q9BS34 389 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 TMEM121Q9BTD3 319 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 PIGVQ9NUD9 493 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 NEU2Q9Y3R4 380 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 PCDHB5Q9Y5E4 795 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 KRT14P02533 472 aa18.87■□□□□ 0.61
SMC4-211ENST00000469858 HSPA1AP0DMV8 641 aaKnown RBP18.87■□□□□ 0.61
SMC4-211ENST00000469858 HSPA1BP0DMV9 641 aaKnown RBP18.87■□□□□ 0.61
SMC4-211ENST00000469858 ATF2P15336 505 aa18.87■□□□□ 0.61
SMC4-211ENST00000469858 DEFB103AP81534 67 aa18.87■□□□□ 0.61
SMC4-211ENST00000469858 SDHAF4Q5VUM1 108 aa18.87■□□□□ 0.61
SMC4-211ENST00000469858 BSPRYQ5W0U4 402 aa18.87■□□□□ 0.61
SMC4-211ENST00000469858 NPNTQ6UXI9 565 aa18.87■□□□□ 0.61
SMC4-211ENST00000469858 SCML4Q8N228 414 aa18.87■□□□□ 0.61
SMC4-211ENST00000469858 MREGQ8N565 214 aa18.87■□□□□ 0.61
SMC4-211ENST00000469858 ALLCQ8N6M5 410 aa18.87■□□□□ 0.61
SMC4-211ENST00000469858 ATAD1Q8NBU5 361 aa18.87■□□□□ 0.61
SMC4-211ENST00000469858 STKLD1Q8NE28 680 aa18.87■□□□□ 0.61
SMC4-211ENST00000469858 SNF8Q96H20 258 aa18.87■□□□□ 0.61
SMC4-211ENST00000469858 KCTD15Q96SI1 283 aaPredicted RBP18.87■□□□□ 0.61
SMC4-211ENST00000469858 TTPALQ9BTX7 342 aa18.87■□□□□ 0.61
SMC4-211ENST00000469858 FRMD8P1Q9BZ68 369 aaPredicted RBP18.87■□□□□ 0.61
SMC4-211ENST00000469858 CWH43Q9H720 699 aa18.87■□□□□ 0.61
SMC4-211ENST00000469858 FZD10Q9ULW2 581 aa18.87■□□□□ 0.61
SMC4-211ENST00000469858 DRG1Q9Y295 367 aaKnown RBP18.87■□□□□ 0.61
SMC4-211ENST00000469858 TNFRSF10BO14763 440 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 ITGAVP06756 1048 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 ADCY8P40145 1251 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 GPR15P49685 360 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 FAM193AP78312 1265 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 DDR2Q16832 855 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 SPOUT1Q5T280 376 aaKnown RBP18.86■□□□□ 0.61
SMC4-211ENST00000469858 VSTM1Q6UX27 236 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 VSIG1Q86XK7 387 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 PYROXD2Q8N2H3 581 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 TTC9BQ8N6N2 239 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 CCDC89Q8N998 374 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 PCDH19Q8TAB3 1148 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 FAM71BQ8TC56 605 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 P3H4Q92791 437 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 TOP1MTQ969P6 601 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 TMPRSS4Q9NRS4 437 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 MTMR10Q9NXD2 777 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 WHRNQ9P202 907 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 H7C4K7 107 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 SGK1O00141 431 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 APOL1O14791 398 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 KIAA0355O15063 1070 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 MCF2LO15068 1137 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 AMHP03971 560 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 KLRC2P26717 231 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 HSPA9P38646 679 aaKnown RBP18.86■□□□□ 0.61
SMC4-211ENST00000469858 EIF3EP60228 445 aaKnown RBP18.86■□□□□ 0.61
SMC4-211ENST00000469858 GPS2Q13227 327 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 C1orf228Q6PIY5 440 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 PRSS55Q6UWB4 352 aaPredicted RBP18.86■□□□□ 0.61
SMC4-211ENST00000469858 RSPO2Q6UXX9 243 aaPredicted RBP18.86■□□□□ 0.61
SMC4-211ENST00000469858 ANKS3Q6ZW76 656 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 PQLC3Q8N755 202 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 GLIS1Q8NBF1 620 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 LRRC45Q96CN5 670 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 C10orf88Q9H8K7 445 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 FAM204AQ9H8W3 233 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 DDIT4Q9NX09 232 aa18.86■□□□□ 0.61
SMC4-211ENST00000469858 GOLGA6BA6NDN3 693 aa18.85■□□□□ 0.61
SMC4-211ENST00000469858 TRIM66O15016 1216 aa18.85■□□□□ 0.61
SMC4-211ENST00000469858 ACRP10323 421 aa18.85■□□□□ 0.61
SMC4-211ENST00000469858 IVDP26440 423 aa18.85■□□□□ 0.61
SMC4-211ENST00000469858 TMC3Q7Z5M5 1100 aa18.85■□□□□ 0.61
SMC4-211ENST00000469858 PLD5Q8N7P1 536 aa18.85■□□□□ 0.61
SMC4-211ENST00000469858 ART4Q93070 314 aa18.85■□□□□ 0.61
SMC4-211ENST00000469858 FAF2Q96CS3 445 aa18.85■□□□□ 0.61
SMC4-211ENST00000469858 RRN3Q9NYV6 651 aa18.85■□□□□ 0.61
SMC4-211ENST00000469858 MTRF1LQ9UGC7 380 aaKnown RBP18.85■□□□□ 0.61
SMC4-211ENST00000469858 COL4A4P53420 1690 aaPredicted RBP18.85■□□□□ 0.61
SMC4-211ENST00000469858 ZNF487B1APH4 448 aa18.84■□□□□ 0.61
SMC4-211ENST00000469858 IFNB1P01574 187 aa18.84■□□□□ 0.61
SMC4-211ENST00000469858 ZSCAN5DPP0CG00 497 aa18.84■□□□□ 0.61
SMC4-211ENST00000469858 ETS1P14921 441 aa18.84■□□□□ 0.61
SMC4-211ENST00000469858 WDR5P61964 334 aaKnown RBP18.84■□□□□ 0.61
SMC4-211ENST00000469858 YWHAGP61981 247 aaKnown RBP eCLIP18.84■□□□□ 0.611e-117■■■■■ 400.8
SMC4-211ENST00000469858 DHX9Q08211 1270 aaKnown RBP18.84■□□□□ 0.61
SMC4-211ENST00000469858 SLC9A4Q6AI14 798 aa18.84■□□□□ 0.61
SMC4-211ENST00000469858 MFSD5Q6N075 450 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms