RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 ATAT1Q5SQI0 421 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 HECTD3Q5T447 861 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 ZFYVE27Q5T4F4 411 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 BSPRYQ5W0U4 402 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 PM20D1Q6GTS8 502 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 PLEKHA7Q6IQ23 1121 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 GET4Q7L5D6 327 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-216ENST00000468949 GRASPQ7Z6J2 395 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-216ENST00000468949 SYCE1Q8N0S2 351 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 C12orf76Q8N812 135 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-216ENST00000468949 TTC16Q8NEE8 873 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 OLIG1Q8TAK6 271 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 SLC35G2Q8TBE7 412 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 FEZF2Q8TBJ5 459 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 PTCD2Q8WV60 388 aaKnown RBP8.49□□□□□ -1.05
HDAC6-216ENST00000468949 EDEM1Q92611 657 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 RNF34Q969K3 372 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 ARHGEF26Q96DR7 871 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 MSLNLQ96KJ4 702 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 MYRFLQ96LU7 910 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 SERPINB11Q96P15 392 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 HCFC1R1Q9NWW0 138 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 PRKAG3Q9UGI9 489 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 CHORDC1Q9UHD1 332 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-216ENST00000468949 IP6K2Q9UHH9 426 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 ZMYM5Q9UJ78 669 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 RASAL2Q9UJF2 1139 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 PYCARDQ9ULZ3 195 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 NENFQ9UMX5 172 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 ZKSCAN5Q9Y2L8 839 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 MYH10P35580 1976 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 PLXNA3P51805 1871 aa8.49□□□□□ -1.05
HDAC6-216ENST00000468949 PTPRDP23468 1912 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 PATJQ8NI35 1801 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 MYO7AQ13402 2215 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 SYNJ2BP-COX16A0A087WUM0 186 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 TRAV19A0A0A6YYK7 116 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 FAM92AA1XBS5 289 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 BTNL10A8MVZ5 291 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 MBTPS2O43462 519 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 BUB1O43683 1085 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 SPOPO43791 374 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 GJB6O95452 261 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 CKMP06732 381 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 MBL2P11226 248 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-216ENST00000468949 HMGA1P17096 107 aaKnown RBP8.48□□□□□ -1.05
HDAC6-216ENST00000468949 FSHRP23945 695 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 NOS2P35228 1153 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 ATP5C1P36542 298 aaKnown RBP8.48□□□□□ -1.05
HDAC6-216ENST00000468949 AVPR1AP37288 418 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 ARHGAP25P42331 645 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 MATKP42679 507 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 MTHFRP42898 656 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 TUBP50607 506 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 CYP4F8P98187 520 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 ATP11AP98196 1134 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 ZP2Q05996 745 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 DEUP1Q05D60 604 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 EFEMP1Q12805 493 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 NME3Q13232 169 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 PIGHQ14442 188 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-216ENST00000468949 MESDQ14696 234 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 SMAD2Q15796 467 aaKnown RBP8.48□□□□□ -1.05
HDAC6-216ENST00000468949 GPR158Q5T848 1215 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 TMEM184AQ6ZMB5 413 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 DAAM2Q86T65 1068 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 MIB1Q86YT6 1006 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 ADHFE1Q8IWW8 467 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 DEFB106AQ8N104 65 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 EMC1Q8N766 993 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 VN1R2Q8NFZ6 395 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 RXFP2Q8WXD0 754 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 NDRG1Q92597 394 aaKnown RBP8.48□□□□□ -1.05
HDAC6-216ENST00000468949 PIWIL1Q96J94 861 aaKnown RBP8.48□□□□□ -1.05
HDAC6-216ENST00000468949 CFAP57Q96MR6 1250 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 NECTIN4Q96NY8 510 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 NCAPGQ9BPX3 1015 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 ZNF334Q9HCZ1 680 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-216ENST00000468949 OSGEPQ9NPF4 335 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 TMEM51Q9NW97 253 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 DDIT4Q9NX09 232 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 CLIC5Q9NZA1 410 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 IL37Q9NZH6 218 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 COX16Q9P0S2 106 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 CLEC1BQ9P126 229 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 DNMT3BQ9UBC3 853 aaKnown RBP8.48□□□□□ -1.05
HDAC6-216ENST00000468949 DNMT3LQ9UJW3 386 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 USTQ9Y2C2 406 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 REXO2Q9Y3B8 237 aaKnown RBP8.48□□□□□ -1.05
HDAC6-216ENST00000468949 MYO16Q9Y6X6 1858 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 CLUHO75153 1309 aa8.48□□□□□ -1.05
HDAC6-216ENST00000468949 TCF20Q9UGU0 1960 aaKnown RBP8.48□□□□□ -1.05
HDAC6-216ENST00000468949 DENND4AQ7Z401 1863 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 ZNF840PA6NDX5 716 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 M0QYT0 321 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 PJA2O43164 708 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 MOCS3O95396 460 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 F9P00740 461 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 APOEP02649 317 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 PFKLP17858 780 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms