RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 SLC26A6Q9BXS9 759 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 FAM126AQ9BYI3 521 aaPredicted RBP5.05□□□□□ -1.6
SF3B1-207ENST00000468925 ZC3H12CQ9C0D7 883 aaKnown RBP5.05□□□□□ -1.6
SF3B1-207ENST00000468925 EPB41L4BQ9H329 900 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 HIPK3Q9H422 1215 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 RNF41Q9H4P4 317 aaPredicted RBP5.05□□□□□ -1.6
SF3B1-207ENST00000468925 MMRN2Q9H8L6 949 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 S100A14Q9HCY8 104 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 C8orf4Q9NR00 106 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 RAD18Q9NS91 495 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 AMACRQ9UHK6 382 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 DNM3Q9UQ16 869 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 LZTS1Q9Y250 596 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 TAF6LQ9Y6J9 622 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 SIGLEC1Q9BZZ2 1709 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 FLT4P35916 1363 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 MAST3O60307 1309 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 XDHP47989 1333 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 RPTORQ8N122 1335 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 IGSF1Q8N6C5 1336 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 A0A087WZG4 1122 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 C15orf38-AP3S2A0A0A6YYH1 394 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 ZSCAN5CA6NGD5 496 aaPredicted RBP5.04□□□□□ -1.6
SF3B1-207ENST00000468925 NOTOA8MTQ0 251 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 EVPLLA8MZ36 301 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 RNF103O00237 685 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 KLF11O14901 512 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 TEX28O15482 410 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 ADCY6O43306 1168 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 ITM2AO43736 263 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 RNASEH1O60930 286 aaKnown RBP5.04□□□□□ -1.6
SF3B1-207ENST00000468925 GMNNO75496 209 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 UFL1O94874 794 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 BMP10O95393 424 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 FTCDO95954 541 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 TFAP2AP05549 437 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 H2AFZP0C0S5 128 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 MYL4P12829 197 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 KRT5P13647 590 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 P4HA1P13674 534 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 KLRC1P26715 233 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 CSTF2P33240 577 aaKnown RBP eCLIP5.04□□□□□ -1.6
SF3B1-207ENST00000468925 FDFT1P37268 417 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 IL15P40933 162 aaPredicted RBP5.04□□□□□ -1.6
SF3B1-207ENST00000468925 UBA7P41226 1012 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 SLC1A1P43005 524 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 SLC1A4P43007 532 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 GPD2P43304 727 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 EPHB1P54762 984 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 PLTPP55058 493 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 VCPP55072 806 aaKnown RBP5.04□□□□□ -1.6
SF3B1-207ENST00000468925 CDK16Q00536 496 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 CHRNEQ04844 493 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 MGAT5Q09328 741 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 WASHC5Q12768 1159 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 TRAP1Q12931 704 aaKnown RBP5.04□□□□□ -1.6
SF3B1-207ENST00000468925 SQSTM1Q13501 440 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 APOFQ13790 326 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 RRP1BQ14684 758 aaKnown RBP5.04□□□□□ -1.6
SF3B1-207ENST00000468925 C16orf72Q14CZ0 275 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 POU4F3Q15319 338 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 PHKG1Q16816 387 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 MTHFSDQ2M296 383 aaKnown RBP5.04□□□□□ -1.6
SF3B1-207ENST00000468925 MYLK3Q32MK0 819 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 EDRF1Q3B7T1 1238 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 RABL6Q3YEC7 729 aaPredicted RBP5.04□□□□□ -1.6
SF3B1-207ENST00000468925 TCHHL1Q5QJ38 904 aaPredicted RBP5.04□□□□□ -1.6
SF3B1-207ENST00000468925 TTC38Q5R3I4 469 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 C1orf146Q5VVC0 180 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 METTL21CQ5VZV1 264 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 KAZNQ674X7 775 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 SIGIRRQ6IA17 410 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 SPOPLQ6IQ16 392 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 C16orf86Q6ZW13 317 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 H2AFVQ71UI9 128 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 MAEAQ7L5Y9 396 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 KRT26Q7Z3Y9 468 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 ARPINQ7Z6K5 226 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 SLC51BQ86UW2 128 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 DCP2Q8IU60 420 aaKnown RBP5.04□□□□□ -1.6
SF3B1-207ENST00000468925 TP53INP2Q8IXH6 220 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 GUF1Q8N442 669 aaKnown RBP5.04□□□□□ -1.6
SF3B1-207ENST00000468925 TTC30BQ8N4P2 665 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 AFAP1L2Q8N4X5 818 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 GOLM1Q8NBJ4 401 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 VPS37AQ8NEZ2 397 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 ZFP28Q8NHY6 868 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 GRPEL2Q8TAA5 225 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 ADAMTS16Q8TE57 1224 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 S100ZQ8WXG8 99 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 DLG3Q92796 817 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 MTBPQ96DY7 904 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 CEP95Q96GE4 821 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 CSRNP1Q96S65 589 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 TCF12Q99081 682 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 PSMB7Q99436 277 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 NEURL2Q9BR09 285 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 YTHDF1Q9BYJ9 559 aaKnown RBP5.04□□□□□ -1.6
SF3B1-207ENST00000468925 NEUROG2Q9H2A3 272 aa5.04□□□□□ -1.6
SF3B1-207ENST00000468925 CLEC4MQ9H2X3 399 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms