RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 ATP2A3Q93084 1043 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 INTS2Q9H0H0 1204 aaKnown RBP11.74□□□□□ -0.53
COL4A6-205ENST00000468338 LMAN1LQ9HAT1 526 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 NMUR1Q9HB89 426 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.74□□□□□ -0.53
COL4A6-205ENST00000468338 CLIC5Q9NZA1 410 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 DACH1Q9UI36 760 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 TSPAN16Q9UKR8 245 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 FBXO4Q9UKT5 387 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 NDRG2Q9UN36 371 aaKnown RBP11.74□□□□□ -0.53
COL4A6-205ENST00000468338 WNT6Q9Y6F9 365 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 E2F8A0AVK6 867 aa11.73□□□□□ -0.53
COL4A6-205ENST00000468338 GOLGA6L22H0YM25 854 aa11.73□□□□□ -0.53
COL4A6-205ENST00000468338 TULP2O00295 520 aa11.73□□□□□ -0.53
COL4A6-205ENST00000468338 SLC9A3R1O14745 358 aaPredicted RBP11.73□□□□□ -0.53
COL4A6-205ENST00000468338 XPO1O14980 1071 aaKnown RBP11.73□□□□□ -0.53
COL4A6-205ENST00000468338 CYP26A1O43174 497 aa11.73□□□□□ -0.53
COL4A6-205ENST00000468338 MBL2P11226 248 aaPredicted RBP11.73□□□□□ -0.53
COL4A6-205ENST00000468338 PLA2G4AP47712 749 aa11.73□□□□□ -0.53
COL4A6-205ENST00000468338 IFNAR2P48551 515 aa11.73□□□□□ -0.53
COL4A6-205ENST00000468338 BCAT1P54687 386 aa11.73□□□□□ -0.53
COL4A6-205ENST00000468338 AMPD2Q01433 879 aa11.73□□□□□ -0.53
COL4A6-205ENST00000468338 MTAPQ13126 283 aa11.73□□□□□ -0.53
COL4A6-205ENST00000468338 PON2Q15165 354 aa11.73□□□□□ -0.53
COL4A6-205ENST00000468338 CNGA2Q16280 664 aa11.73□□□□□ -0.53
COL4A6-205ENST00000468338 MAN2A1Q16706 1144 aa11.73□□□□□ -0.53
COL4A6-205ENST00000468338 ZNF528Q3MIS6 628 aa11.73□□□□□ -0.53
COL4A6-205ENST00000468338 DPY19L2P1Q6NXN4 242 aa11.73□□□□□ -0.53
COL4A6-205ENST00000468338 TRIM65Q6PJ69 517 aa11.73□□□□□ -0.53
COL4A6-205ENST00000468338 ENOSF1Q7L5Y1 443 aa11.73□□□□□ -0.53
COL4A6-205ENST00000468338 BHLHA9Q7RTU4 235 aa11.73□□□□□ -0.53
COL4A6-205ENST00000468338 SCML4Q8N228 414 aa11.73□□□□□ -0.53
COL4A6-205ENST00000468338 CPA6Q8N4T0 437 aa11.73□□□□□ -0.53
COL4A6-205ENST00000468338 ENOX1Q8TC92 643 aaKnown RBP11.73□□□□□ -0.53
COL4A6-205ENST00000468338 SLC35F5Q8WV83 523 aa11.73□□□□□ -0.53
COL4A6-205ENST00000468338 KCTD13Q8WZ19 329 aa11.73□□□□□ -0.53
COL4A6-205ENST00000468338 KLF16Q9BXK1 252 aaPredicted RBP11.73□□□□□ -0.53
COL4A6-205ENST00000468338 PRMT8Q9NR22 394 aaPredicted RBP11.73□□□□□ -0.53
COL4A6-205ENST00000468338 FAM86C1Q9NVL1 165 aa11.73□□□□□ -0.53
COL4A6-205ENST00000468338 SMPD4Q9NXE4 827 aa11.73□□□□□ -0.53
COL4A6-205ENST00000468338 CFAP97Q9P2B7 532 aa11.73□□□□□ -0.53
COL4A6-205ENST00000468338 PCDHB4Q9Y5E5 795 aa11.73□□□□□ -0.53
COL4A6-205ENST00000468338 MYO18AQ92614 2054 aaKnown RBP11.72□□□□□ -0.53
COL4A6-205ENST00000468338 A0A1W2PQH9 124 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 SOWAHDA6NJG2 315 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 PAPSS2O95340 614 aaPredicted RBP11.72□□□□□ -0.53
COL4A6-205ENST00000468338 NFATC1O95644 943 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 MBD3O95983 291 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 SP9P0CG40 484 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 SETSIPP0DME0 302 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 TDGF1P13385 188 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 CD19P15391 556 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 SLC9A1P19634 815 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 PON1P27169 355 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 ATP5C1P36542 298 aaKnown RBP11.72□□□□□ -0.53
COL4A6-205ENST00000468338 GALK1P51570 392 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 SLC8A3P57103 927 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 BST2Q10589 180 aaKnown RBP11.72□□□□□ -0.53
COL4A6-205ENST00000468338 LRRC32Q14392 662 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 STILQ15468 1287 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 GOLGA7BQ2TAP0 167 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 MIIPQ5JXC2 388 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 FSTL4Q6MZW2 842 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 GBP6Q6ZN66 633 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 HTR3DQ70Z44 454 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 FAM114A1Q8IWE2 563 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 RBBP8NLQ8NC74 664 aaPredicted RBP11.72□□□□□ -0.53
COL4A6-205ENST00000468338 C1orf216Q8TAB5 229 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 WBP2Q969T9 261 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 OTUB2Q96DC9 234 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 FAM81BQ96LP2 452 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 CRACR2AQ9BSW2 395 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 FBRSL1Q9HCM7 1045 aaKnown RBP11.72□□□□□ -0.53
COL4A6-205ENST00000468338 SIX2Q9NPC8 291 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 SPATA6Q9NWH7 488 aaPredicted RBP11.72□□□□□ -0.53
COL4A6-205ENST00000468338 TBC1D14Q9P2M4 693 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 HESX1Q9UBX0 185 aa11.72□□□□□ -0.53
COL4A6-205ENST00000468338 CDV3Q9UKY7 258 aaKnown RBP11.72□□□□□ -0.53
COL4A6-205ENST00000468338 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.72□□□□□ -0.53
COL4A6-205ENST00000468338 LAMTOR5O43504 91 aa11.71□□□□□ -0.53
COL4A6-205ENST00000468338 TBX18O95935 607 aa11.71□□□□□ -0.53
COL4A6-205ENST00000468338 CYP17A1P05093 508 aa11.71□□□□□ -0.53
COL4A6-205ENST00000468338 RARGP13631 454 aa11.71□□□□□ -0.53
COL4A6-205ENST00000468338 OPRD1P41143 372 aa11.71□□□□□ -0.53
COL4A6-205ENST00000468338 MTIF2P46199 727 aaKnown RBP11.71□□□□□ -0.53
COL4A6-205ENST00000468338 RPL34P49207 117 aaKnown RBP11.71□□□□□ -0.53
COL4A6-205ENST00000468338 MRE11P49959 708 aa11.71□□□□□ -0.53
COL4A6-205ENST00000468338 DHCR24Q15392 516 aa11.71□□□□□ -0.53
COL4A6-205ENST00000468338 MEA1Q16626 185 aa11.71□□□□□ -0.53
COL4A6-205ENST00000468338 TPD52L1Q16890 204 aaPredicted RBP11.71□□□□□ -0.53
COL4A6-205ENST00000468338 EXOC3L4Q17RC7 722 aa11.71□□□□□ -0.53
COL4A6-205ENST00000468338 LINC01559Q495D7 138 aa11.71□□□□□ -0.53
COL4A6-205ENST00000468338 VWA3BQ502W6 1294 aa11.71□□□□□ -0.53
COL4A6-205ENST00000468338 NAIF1Q69YI7 327 aaPredicted RBP11.71□□□□□ -0.53
COL4A6-205ENST00000468338 RHBDF2Q6PJF5 856 aa11.71□□□□□ -0.53
COL4A6-205ENST00000468338 SPEM1Q8N4L4 309 aa11.71□□□□□ -0.53
COL4A6-205ENST00000468338 ZNF511Q8NB15 262 aa11.71□□□□□ -0.53
COL4A6-205ENST00000468338 SHC3Q92529 594 aa11.71□□□□□ -0.53
COL4A6-205ENST00000468338 EZH1Q92800 747 aaPredicted RBP11.71□□□□□ -0.53
COL4A6-205ENST00000468338 FOXJ1Q92949 421 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms