RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 SYPL2Q5VXT5 272 aa12.65□□□□□ -0.38
VPS16-206ENST00000466415 SPATA31D4Q6ZUB0 917 aa12.65□□□□□ -0.38
VPS16-206ENST00000466415 TADA2BQ86TJ2 420 aa12.65□□□□□ -0.38
VPS16-206ENST00000466415 CREG2Q8IUH2 290 aa12.65□□□□□ -0.38
VPS16-206ENST00000466415 RCOR2Q8IZ40 523 aa12.65□□□□□ -0.38
VPS16-206ENST00000466415 ADAM32Q8TC27 787 aa12.65□□□□□ -0.38
VPS16-206ENST00000466415 ACTRT1Q8TDG2 376 aa12.65□□□□□ -0.38
VPS16-206ENST00000466415 DQX1Q8TE96 717 aaKnown RBP12.65□□□□□ -0.38
VPS16-206ENST00000466415 OVCA2Q8WZ82 227 aa12.65□□□□□ -0.38
VPS16-206ENST00000466415 CENPIQ92674 756 aaPredicted RBP12.65□□□□□ -0.38
VPS16-206ENST00000466415 RNF34Q969K3 372 aa12.65□□□□□ -0.38
VPS16-206ENST00000466415 MS4A14Q96JA4 679 aa12.65□□□□□ -0.38
VPS16-206ENST00000466415 ZNF512Q96ME7 567 aaPredicted RBP12.65□□□□□ -0.38
VPS16-206ENST00000466415 CDK5RAP1Q96SZ6 601 aaKnown RBP12.65□□□□□ -0.38
VPS16-206ENST00000466415 TTLL2Q9BWV7 592 aa12.65□□□□□ -0.38
VPS16-206ENST00000466415 NMUR1Q9HB89 426 aa12.65□□□□□ -0.38
VPS16-206ENST00000466415 OLA1Q9NTK5 396 aaKnown RBP12.65□□□□□ -0.38
VPS16-206ENST00000466415 IL37Q9NZH6 218 aa12.65□□□□□ -0.38
VPS16-206ENST00000466415 ASB3Q9Y575 518 aa12.65□□□□□ -0.38
VPS16-206ENST00000466415 PLXNA3P51805 1871 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 GOLGA6L10A0A0M3HER8 536 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 FGGP02679 453 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 FYNP06241 537 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 PYGMP11217 842 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 RARGP13631 454 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 TFE3P19532 575 aaPredicted RBP12.64□□□□□ -0.39
VPS16-206ENST00000466415 IL1R2P27930 398 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 IRS1P35568 1242 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 ARL13BQ3SXY8 428 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 KCNT1Q5JUK3 1230 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 PPM1LQ5SGD2 360 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 SCD5Q86SK9 330 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 TAC4Q86UU9 113 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 FAM131BQ86XD5 332 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 RASGEF1CQ8N431 466 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 ARFGAP1Q8N6T3 406 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 KCTD6Q8NC69 237 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 GDPD5Q8WTR4 605 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 TEKT4Q8WW24 435 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 MAIP1Q8WWC4 291 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 RNF25Q96BH1 459 aaPredicted RBP12.64□□□□□ -0.39
VPS16-206ENST00000466415 TIFAQ96CG3 184 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 ACSF2Q96CM8 615 aaPredicted RBP12.64□□□□□ -0.39
VPS16-206ENST00000466415 TRMT2BQ96GJ1 504 aaKnown RBP12.64□□□□□ -0.39
VPS16-206ENST00000466415 RPGRIP1Q96KN7 1286 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 SERPINB11Q96P15 392 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 GCNAQ96QF7 691 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 PEBP4Q96S96 227 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 NACA2Q9H009 215 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 SMOC2Q9H3U7 446 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.64□□□□□ -0.39
VPS16-206ENST00000466415 TMEM51Q9NW97 253 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 CLIC5Q9NZA1 410 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.64□□□□□ -0.39
VPS16-206ENST00000466415 SMARCAL1Q9NZC9 954 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 TRPM5Q9NZQ8 1165 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 DPP7Q9UHL4 492 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 RASAL2Q9UJF2 1139 aa12.64□□□□□ -0.39
VPS16-206ENST00000466415 PI4K2BG5E9Z4 385 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 MDM4O15151 490 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 CLASP2O75122 1294 aaKnown RBP12.63□□□□□ -0.39
VPS16-206ENST00000466415 ENDOD1O94919 500 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 RARAP10276 462 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 CLCN4P51793 760 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 ATXN1P54253 815 aaKnown RBP12.63□□□□□ -0.39
VPS16-206ENST00000466415 AIF1P55008 147 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 CDH6P55285 790 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 COPS2P61201 443 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 PITX1P78337 314 aaPredicted RBP12.63□□□□□ -0.39
VPS16-206ENST00000466415 EFEMP1Q12805 493 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 RAB6CQ53S08 254 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 EFHC2Q5JST6 749 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 C10orf120Q5SQS8 335 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 ERMARDQ5T6L9 678 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 OTUD1Q5VV17 481 aaPredicted RBP12.63□□□□□ -0.39
VPS16-206ENST00000466415 TXNRD3NBQ6F5E7 133 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 AADACL2Q6P093 401 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 LILRA6Q6PI73 481 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 CHRDL2Q6WN34 429 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 MAP7D3Q8IWC1 876 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 PPP2R3CQ969Q6 453 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 NT5C3BQ969T7 300 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 PSMG2Q969U7 264 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 PGAP3Q96FM1 320 aaPredicted RBP12.63□□□□□ -0.39
VPS16-206ENST00000466415 SNRNP25Q9BV90 132 aaKnown RBP12.63□□□□□ -0.39
VPS16-206ENST00000466415 CALN1Q9BXU9 219 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 RAB6CQ9H0N0 254 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 PLEKHA4Q9H4M7 779 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 MAN1C1Q9NR34 630 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.63□□□□□ -0.39
VPS16-206ENST00000466415 TTC7AQ9ULT0 858 aaPredicted RBP12.63□□□□□ -0.39
VPS16-206ENST00000466415 AP4E1Q9UPM8 1137 aa12.63□□□□□ -0.39
VPS16-206ENST00000466415 KRIT1O00522 736 aa12.62□□□□□ -0.39
VPS16-206ENST00000466415 IRAK2O43187 625 aa12.62□□□□□ -0.39
VPS16-206ENST00000466415 TLR5O60602 858 aa12.62□□□□□ -0.39
VPS16-206ENST00000466415 C1RP00736 705 aa12.62□□□□□ -0.39
VPS16-206ENST00000466415 HMGA1P17096 107 aaKnown RBP12.62□□□□□ -0.39
VPS16-206ENST00000466415 PPP3CCP48454 512 aa12.62□□□□□ -0.39
VPS16-206ENST00000466415 SMAD3P84022 425 aaKnown RBP12.62□□□□□ -0.39
VPS16-206ENST00000466415 C2orf54Q08AI8 447 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms