RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 KLF16Q9BXK1 252 aaPredicted RBP17.73■□□□□ 0.43
USP39-211ENST00000465282 BRD9Q9H8M2 597 aa17.73■□□□□ 0.43
USP39-211ENST00000465282 SEPT11Q9NVA2 429 aaKnown RBP17.73■□□□□ 0.43
USP39-211ENST00000465282 MARCH2Q9P0N8 246 aa17.73■□□□□ 0.43
USP39-211ENST00000465282 TBC1D14Q9P2M4 693 aa17.73■□□□□ 0.43
USP39-211ENST00000465282 WNT16Q9UBV4 365 aa17.73■□□□□ 0.43
USP39-211ENST00000465282 CAPN9O14815 690 aa17.72■□□□□ 0.43
USP39-211ENST00000465282 CALB1P05937 261 aa17.72■□□□□ 0.43
USP39-211ENST00000465282 NCAM1P13591 858 aa17.72■□□□□ 0.43
USP39-211ENST00000465282 GSCP56915 257 aaPredicted RBP17.72■□□□□ 0.43
USP39-211ENST00000465282 GPC5P78333 572 aa17.72■□□□□ 0.43
USP39-211ENST00000465282 ZXDBP98169 803 aa17.72■□□□□ 0.43
USP39-211ENST00000465282 C1QBPQ07021 282 aaKnown RBP17.72■□□□□ 0.43
USP39-211ENST00000465282 PDGFRLQ15198 375 aa17.72■□□□□ 0.43
USP39-211ENST00000465282 TDRD12Q587J7 1177 aaKnown RBP17.72■□□□□ 0.43
USP39-211ENST00000465282 ACAD10Q6JQN1 1059 aa17.72■□□□□ 0.43
USP39-211ENST00000465282 OLFML1Q6UWY5 402 aa17.72■□□□□ 0.43
USP39-211ENST00000465282 HFE2Q6ZVN8 426 aa17.72■□□□□ 0.43
USP39-211ENST00000465282 FAM183BPQ6ZVS7 135 aa17.72■□□□□ 0.43
USP39-211ENST00000465282 ZNF571Q7Z3V5 609 aaPredicted RBP17.72■□□□□ 0.43
USP39-211ENST00000465282 TMC6Q7Z403 805 aa17.72■□□□□ 0.43
USP39-211ENST00000465282 XYLT1Q86Y38 959 aa17.72■□□□□ 0.43
USP39-211ENST00000465282 GPIHBP1Q8IV16 184 aa17.72■□□□□ 0.43
USP39-211ENST00000465282 OTUB2Q96DC9 234 aa17.72■□□□□ 0.43
USP39-211ENST00000465282 DCLK3Q9C098 648 aa17.72■□□□□ 0.43
USP39-211ENST00000465282 RRN3Q9NYV6 651 aa17.72■□□□□ 0.43
USP39-211ENST00000465282 ADAM22Q9P0K1 906 aa17.72■□□□□ 0.43
USP39-211ENST00000465282 HBS1LQ9Y450 684 aaKnown RBP17.72■□□□□ 0.43
USP39-211ENST00000465282 TICRRQ7Z2Z1 1910 aa17.71■□□□□ 0.43
USP39-211ENST00000465282 AKR1B15C9JRZ8 316 aaPredicted RBP17.71■□□□□ 0.43
USP39-211ENST00000465282 MFAP3LO75121 409 aa17.71■□□□□ 0.43
USP39-211ENST00000465282 FYNP06241 537 aa17.71■□□□□ 0.43
USP39-211ENST00000465282 GLULP15104 373 aa17.71■□□□□ 0.43
USP39-211ENST00000465282 SIGLEC14Q08ET2 396 aa17.71■□□□□ 0.43
USP39-211ENST00000465282 EFEMP1Q12805 493 aa17.71■□□□□ 0.43
USP39-211ENST00000465282 NNTQ13423 1086 aa17.71■□□□□ 0.43
USP39-211ENST00000465282 GRM2Q14416 872 aa17.71■□□□□ 0.43
USP39-211ENST00000465282 HTR3DQ70Z44 454 aa17.71■□□□□ 0.43
USP39-211ENST00000465282 ST13P5Q8NFI4 369 aaPredicted RBP17.71■□□□□ 0.43
USP39-211ENST00000465282 OSCP1Q8WVF1 389 aa17.71■□□□□ 0.43
USP39-211ENST00000465282 EDEM1Q92611 657 aa17.71■□□□□ 0.43
USP39-211ENST00000465282 FAM83CQ9BQN1 747 aa17.71■□□□□ 0.43
USP39-211ENST00000465282 GKN1Q9NS71 199 aa17.71■□□□□ 0.43
USP39-211ENST00000465282 SMPD4Q9NXE4 827 aa17.71■□□□□ 0.43
USP39-211ENST00000465282 CFAP97Q9P2B7 532 aa17.71■□□□□ 0.43
USP39-211ENST00000465282 TJP2Q9UDY2 1190 aa17.71■□□□□ 0.43
USP39-211ENST00000465282 RASAL2Q9UJF2 1139 aa17.71■□□□□ 0.43
USP39-211ENST00000465282 LSM7Q9UK45 103 aaKnown RBP17.71■□□□□ 0.43
USP39-211ENST00000465282 NUDT5Q9UKK9 219 aa17.71■□□□□ 0.43
USP39-211ENST00000465282 ZNF510Q9Y2H8 683 aa17.71■□□□□ 0.43
USP39-211ENST00000465282 SH3BP1Q9Y3L3 701 aa17.71■□□□□ 0.43
USP39-211ENST00000465282 ARNTLO00327 626 aa17.7■□□□□ 0.42
USP39-211ENST00000465282 NARSO43776 548 aaKnown RBP17.7■□□□□ 0.42
USP39-211ENST00000465282 SKILP12757 684 aa17.7■□□□□ 0.42
USP39-211ENST00000465282 CDC25BP30305 580 aa17.7■□□□□ 0.42
USP39-211ENST00000465282 IFNAR2P48551 515 aa17.7■□□□□ 0.42
USP39-211ENST00000465282 CDK17Q00537 523 aa17.7■□□□□ 0.42
USP39-211ENST00000465282 RING1Q06587 406 aa17.7■□□□□ 0.42
USP39-211ENST00000465282 C1orf228Q6PIY5 440 aa17.7■□□□□ 0.42
USP39-211ENST00000465282 MIB1Q86YT6 1006 aa17.7■□□□□ 0.42
USP39-211ENST00000465282 SLC30A5Q8TAD4 765 aa17.7■□□□□ 0.42
USP39-211ENST00000465282 CSGALNACT1Q8TDX6 532 aa17.7■□□□□ 0.42
USP39-211ENST00000465282 ATP2A3Q93084 1043 aa17.7■□□□□ 0.42
USP39-211ENST00000465282 PLD4Q96BZ4 506 aa17.7■□□□□ 0.42
USP39-211ENST00000465282 MSANTD3Q96H12 275 aa17.7■□□□□ 0.42
USP39-211ENST00000465282 SERPINB11Q96P15 392 aa17.7■□□□□ 0.42
USP39-211ENST00000465282 SLC2A13Q96QE2 648 aa17.7■□□□□ 0.42
USP39-211ENST00000465282 SMOC2Q9H3U7 446 aa17.7■□□□□ 0.42
USP39-211ENST00000465282 ABHD10Q9NUJ1 306 aa17.7■□□□□ 0.42
USP39-211ENST00000465282 DUS2Q9NX74 493 aaKnown RBP17.7■□□□□ 0.42
USP39-211ENST00000465282 SSU72P8A0A1W2PR75 194 aa17.69■□□□□ 0.42
USP39-211ENST00000465282 DDX3XO00571 662 aaKnown RBP eCLIP17.69■□□□□ 0.429e-13■■■■□ 21.9
USP39-211ENST00000465282 RTN2O75298 545 aa17.69■□□□□ 0.42
USP39-211ENST00000465282 DAB1O75553 588 aa17.69■□□□□ 0.42
USP39-211ENST00000465282 NOS2P35228 1153 aa17.69■□□□□ 0.42
USP39-211ENST00000465282 MATKP42679 507 aa17.69■□□□□ 0.42
USP39-211ENST00000465282 PTP4A2Q12974 167 aa17.69■□□□□ 0.42
USP39-211ENST00000465282 TRIP4Q15650 581 aaPredicted RBP17.69■□□□□ 0.42
USP39-211ENST00000465282 FAM102AQ5T9C2 384 aaPredicted RBP17.69■□□□□ 0.42
USP39-211ENST00000465282 MMS22LQ6ZRQ5 1243 aa17.69■□□□□ 0.42
USP39-211ENST00000465282 MON1BQ7L1V2 547 aa17.69■□□□□ 0.42
USP39-211ENST00000465282 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.69■□□□□ 0.42
USP39-211ENST00000465282 RIN3Q8TB24 985 aa17.69■□□□□ 0.42
USP39-211ENST00000465282 KHSRPQ92945 711 aaKnown RBP eCLIP17.69■□□□□ 0.42
USP39-211ENST00000465282 TRIM11Q96F44 468 aa17.69■□□□□ 0.42
USP39-211ENST00000465282 SHDQ96IW2 340 aa17.69■□□□□ 0.42
USP39-211ENST00000465282 NAALADL1Q9UQQ1 740 aa17.69■□□□□ 0.42
USP39-211ENST00000465282 COL4A2P08572 1712 aa17.69■□□□□ 0.42
USP39-211ENST00000465282 SLC12A8A0AV02 714 aa17.68■□□□□ 0.42
USP39-211ENST00000465282 MDM4O15151 490 aa17.68■□□□□ 0.42
USP39-211ENST00000465282 STC2O76061 302 aa17.68■□□□□ 0.42
USP39-211ENST00000465282 LATS1O95835 1130 aa17.68■□□□□ 0.42
USP39-211ENST00000465282 GBP1P32455 592 aa17.68■□□□□ 0.42
USP39-211ENST00000465282 HARS2P49590 506 aaKnown RBP17.68■□□□□ 0.42
USP39-211ENST00000465282 ADKP55263 362 aaKnown RBP17.68■□□□□ 0.42
USP39-211ENST00000465282 AMPD2Q01433 879 aa17.68■□□□□ 0.42
USP39-211ENST00000465282 PRKCQQ04759 706 aa17.68■□□□□ 0.42
USP39-211ENST00000465282 NR1H3Q13133 447 aa17.68■□□□□ 0.42
USP39-211ENST00000465282 MTA1Q13330 715 aa17.68■□□□□ 0.42
USP39-211ENST00000465282 MAPK8IP2Q13387 824 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms