RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, human

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATF3-208	ENST00000465155	F11	P03951	625 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	MYL4	P12829	197 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	TNNT1	P13805	278 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	IGFBP4	P22692	258 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	GABRR2	P28476	465 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	MAN1A1	P33908	653 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	SLC1A1	P43005	524 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	SSR1	P43307	286 aa	Known RBP	13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	PPP3CC	P48454	512 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	ADGRE1	Q14246	886 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	PABPC1L	Q4VXU2	614 aa	Known RBP	13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	RAB6C	Q53S08	254 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	TMEM150A	Q86TG1	271 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	NT5DC3	Q86UY8	548 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	TMC8	Q8IU68	726 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	EFHB	Q8N7U6	833 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	ADAM32	Q8TC27	787 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	NT5C3B	Q969T7	300 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	NPY6R	Q99463	290 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	LRRC3	Q9BY71	257 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	ADAM33	Q9BZ11	813 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	RAB6C	Q9H0N0	254 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	SFXN1	Q9H9B4	322 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	IL21	Q9HBE4	155 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	DZANK1	Q9NVP4	752 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	RRN3	Q9NYV6	651 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	CALCOCO1	Q9P1Z2	691 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	DNMT3B	Q9UBC3	853 aa	Known RBP	13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	AMFR	Q9UKV5	643 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	DOCK6	Q96HP0	2047 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	C2orf16	Q68DN1	1984 aa		13.98	□□□□□ -0.17
ATF3-208	ENST00000465155	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	KIF2A	O00139	706 aa	Predicted RBP	13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	NCK2	O43639	380 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	TLR5	O60602	858 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	LRCH4	O75427	683 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	SRGAP2B	P0DMP2	458 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	PTPN2	P17706	415 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	NME3	Q13232	169 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	MEI1	Q5TIA1	1274 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	OTUD1	Q5VV17	481 aa	Predicted RBP	13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	SNX30	Q5VWJ9	437 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	TMC5	Q6UXY8	1006 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	TAC4	Q86UU9	113 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	ARFGAP1	Q8N6T3	406 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	DQX1	Q8TE96	717 aa	Known RBP	13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	CENPI	Q92674	756 aa	Predicted RBP	13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	ZNF707	Q96C28	371 aa	Predicted RBP	13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	CCSER2	Q9H7U1	834 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	FAM204A	Q9H8W3	233 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	DDIT4	Q9NX09	232 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	COX16	Q9P0S2	106 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	SFMBT1	Q9UHJ3	866 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	JRKL	Q9Y4A0	524 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	FANCG	O15287	622 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	TRUB2	O95900	331 aa	Known RBP	13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	TUBB4A	P04350	444 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	RHO	P08100	348 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	TCF4	P15884	667 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	CASQ1	P31415	396 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	RDX	P35241	583 aa	Known RBP	13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	VASP	P50552	380 aa	Predicted RBP	13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	DNA2	P51530	1060 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	ATXN1	P54253	815 aa	Known RBP	13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	HDAC4	P56524	1084 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	DEUP1	Q05D60	604 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	C10orf120	Q5SQS8	335 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	HECTD3	Q5T447	861 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	TMEM184A	Q6ZMB5	413 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	GAREM2	Q75VX8	874 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	PDZD4	Q76G19	769 aa	Predicted RBP	13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	STRADA	Q7RTN6	431 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	ZNF592	Q92610	1267 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	GCNA	Q96QF7	691 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	GAS2L1	Q99501	681 aa	Predicted RBP	13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	SMOC2	Q9H3U7	446 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	PIDD1	Q9HB75	910 aa		13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	OLA1	Q9NTK5	396 aa	Known RBP	13.97	□□□□□ -0.17
ATF3-208	ENST00000465155	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	SZT2	Q5T011	3432 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	NOTCH4	Q99466	2003 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155		A0A1W2PRU2	124 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	CTAGE9	A4FU28	777 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	C2orf78	A6NCI8	922 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	MDM4	O15151	490 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	TBX18	O95935	607 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	ATP1A1	P05023	1023 aa	Known RBP	13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	POU2F2	P09086	479 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	GJA1	P17302	382 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	POU3F3	P20264	500 aa	Predicted RBP	13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	MIP	P30301	263 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	CDC25C	P30307	473 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	PCK1	P35558	622 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	EPHA5	P54756	1037 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	TAS2R40	P59535	323 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	CYP4F8	P98187	520 aa		13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms