RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 FAM183BPQ6ZVS7 135 aa20.7■□□□□ 0.9
COL9A3-204ENST00000463487 SLC26A9Q7LBE3 791 aa20.7■□□□□ 0.9
COL9A3-204ENST00000463487 ATP2A3Q93084 1043 aa20.7■□□□□ 0.9
COL9A3-204ENST00000463487 SHDQ96IW2 340 aa20.7■□□□□ 0.9
COL9A3-204ENST00000463487 KLF16Q9BXK1 252 aaPredicted RBP20.7■□□□□ 0.9
COL9A3-204ENST00000463487 DCLK3Q9C098 648 aa20.7■□□□□ 0.9
COL9A3-204ENST00000463487 DUS2Q9NX74 493 aaKnown RBP20.7■□□□□ 0.9
COL9A3-204ENST00000463487 HBS1LQ9Y450 684 aaKnown RBP20.7■□□□□ 0.9
COL9A3-204ENST00000463487 TTC28Q96AY4 2481 aa20.69■□□□□ 0.9
COL9A3-204ENST00000463487 DLL1O00548 723 aa20.69■□□□□ 0.9
COL9A3-204ENST00000463487 IRF1P10914 325 aa20.69■□□□□ 0.9
COL9A3-204ENST00000463487 UNGP13051 313 aaPredicted RBP20.69■□□□□ 0.9
COL9A3-204ENST00000463487 MMP8P22894 467 aa20.69■□□□□ 0.9
COL9A3-204ENST00000463487 C1orf228Q6PIY5 440 aa20.69■□□□□ 0.9
COL9A3-204ENST00000463487 OLFML1Q6UWY5 402 aa20.69■□□□□ 0.9
COL9A3-204ENST00000463487 DRC7Q8IY82 874 aa20.69■□□□□ 0.9
COL9A3-204ENST00000463487 OSCP1Q8WVF1 389 aa20.69■□□□□ 0.9
COL9A3-204ENST00000463487 PLD4Q96BZ4 506 aa20.69■□□□□ 0.9
COL9A3-204ENST00000463487 OTUB2Q96DC9 234 aa20.69■□□□□ 0.9
COL9A3-204ENST00000463487 GKN1Q9NS71 199 aa20.69■□□□□ 0.9
COL9A3-204ENST00000463487 TMEM51Q9NW97 253 aa20.69■□□□□ 0.9
COL9A3-204ENST00000463487 ADAM22Q9P0K1 906 aa20.69■□□□□ 0.9
COL9A3-204ENST00000463487 ZNF510Q9Y2H8 683 aa20.69■□□□□ 0.9
COL9A3-204ENST00000463487 VCANP13611 3396 aa20.69■□□□□ 0.9
COL9A3-204ENST00000463487 SLC12A8A0AV02 714 aa20.68■□□□□ 0.9
COL9A3-204ENST00000463487 MDM4O15151 490 aa20.68■□□□□ 0.9
COL9A3-204ENST00000463487 MFAP3LO75121 409 aa20.68■□□□□ 0.9
COL9A3-204ENST00000463487 NFATC1O95644 943 aa20.68■□□□□ 0.9
COL9A3-204ENST00000463487 AMPD2Q01433 879 aa20.68■□□□□ 0.9
COL9A3-204ENST00000463487 NR1H3Q13133 447 aa20.68■□□□□ 0.9
COL9A3-204ENST00000463487 FAM102AQ5T9C2 384 aaPredicted RBP20.68■□□□□ 0.9
COL9A3-204ENST00000463487 E4F1Q66K89 784 aaPredicted RBP20.68■□□□□ 0.9
COL9A3-204ENST00000463487 ACAD10Q6JQN1 1059 aa20.68■□□□□ 0.9
COL9A3-204ENST00000463487 MMS22LQ6ZRQ5 1243 aa20.68■□□□□ 0.9
COL9A3-204ENST00000463487 TRIM67Q6ZTA4 783 aa20.68■□□□□ 0.9
COL9A3-204ENST00000463487 HFE2Q6ZVN8 426 aa20.68■□□□□ 0.9
COL9A3-204ENST00000463487 PHF13Q86YI8 300 aaPredicted RBP20.68■□□□□ 0.9
COL9A3-204ENST00000463487 CPA6Q8N4T0 437 aa20.68■□□□□ 0.9
COL9A3-204ENST00000463487 SLC30A5Q8TAD4 765 aa20.68■□□□□ 0.9
COL9A3-204ENST00000463487 EXOC4Q96A65 974 aa20.68■□□□□ 0.9
COL9A3-204ENST00000463487 MSANTD3Q96H12 275 aa20.68■□□□□ 0.9
COL9A3-204ENST00000463487 ZFRQ96KR1 1074 aaKnown RBP20.68■□□□□ 0.9
COL9A3-204ENST00000463487 SERPINB11Q96P15 392 aa20.68■□□□□ 0.9
COL9A3-204ENST00000463487 LRRC3BQ96PB8 259 aa20.68■□□□□ 0.9
COL9A3-204ENST00000463487 DNAJC7Q99615 494 aa20.68■□□□□ 0.9
COL9A3-204ENST00000463487 C11orf70Q9BRQ4 267 aa20.68■□□□□ 0.9
COL9A3-204ENST00000463487 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.68■□□□□ 0.9
COL9A3-204ENST00000463487 SMOC2Q9H3U7 446 aa20.68■□□□□ 0.9
COL9A3-204ENST00000463487 RRN3Q9NYV6 651 aa20.68■□□□□ 0.9
COL9A3-204ENST00000463487 TJP2Q9UDY2 1190 aa20.68■□□□□ 0.9
COL9A3-204ENST00000463487 AKR1B15C9JRZ8 316 aaPredicted RBP20.67■□□□□ 0.9
COL9A3-204ENST00000463487 AP5Z1O43299 807 aa20.67■□□□□ 0.9
COL9A3-204ENST00000463487 DAB1O75553 588 aa20.67■□□□□ 0.9
COL9A3-204ENST00000463487 GZMAP12544 262 aa20.67■□□□□ 0.9
COL9A3-204ENST00000463487 GLULP15104 373 aa20.67■□□□□ 0.9
COL9A3-204ENST00000463487 HNRNPH3P31942 346 aaKnown RBP20.67■□□□□ 0.9
COL9A3-204ENST00000463487 GBP1P32455 592 aa20.67■□□□□ 0.9
COL9A3-204ENST00000463487 HARS2P49590 506 aaKnown RBP20.67■□□□□ 0.9
COL9A3-204ENST00000463487 CDK17Q00537 523 aa20.67■□□□□ 0.9
COL9A3-204ENST00000463487 C1QBPQ07021 282 aaKnown RBP20.67■□□□□ 0.9
COL9A3-204ENST00000463487 NNTQ13423 1086 aa20.67■□□□□ 0.9
COL9A3-204ENST00000463487 ITPRIPL2Q3MIP1 535 aa20.67■□□□□ 0.9
COL9A3-204ENST00000463487 DCAF6Q58WW2 860 aa20.67■□□□□ 0.9
COL9A3-204ENST00000463487 HTR3DQ70Z44 454 aa20.67■□□□□ 0.9
COL9A3-204ENST00000463487 ZNF571Q7Z3V5 609 aaPredicted RBP20.67■□□□□ 0.9
COL9A3-204ENST00000463487 XYLT1Q86Y38 959 aa20.67■□□□□ 0.9
COL9A3-204ENST00000463487 TRIM11Q96F44 468 aa20.67■□□□□ 0.9
COL9A3-204ENST00000463487 VCPIP1Q96JH7 1222 aa20.67■□□□□ 0.9
COL9A3-204ENST00000463487 PCDHB18PQ96TA0 734 aa20.67■□□□□ 0.9
COL9A3-204ENST00000463487 MFSD1Q9H3U5 465 aa20.67■□□□□ 0.9
COL9A3-204ENST00000463487 DEF6Q9H4E7 631 aa20.67■□□□□ 0.9
COL9A3-204ENST00000463487 ARHGEF3Q9NR81 526 aa20.67■□□□□ 0.9
COL9A3-204ENST00000463487 ABHD10Q9NUJ1 306 aa20.67■□□□□ 0.9
COL9A3-204ENST00000463487 STAP1Q9ULZ2 295 aa20.67■□□□□ 0.9
COL9A3-204ENST00000463487 WNT6Q9Y6F9 365 aa20.67■□□□□ 0.9
COL9A3-204ENST00000463487 ANKRD62A6NC57 917 aa20.66■□□□□ 0.9
COL9A3-204ENST00000463487 GOLGA6L6A8MZA4 724 aa20.66■□□□□ 0.9
COL9A3-204ENST00000463487 SKILP12757 684 aa20.66■□□□□ 0.9
COL9A3-204ENST00000463487 MLLT6P55198 1093 aaPredicted RBP20.66■□□□□ 0.9
COL9A3-204ENST00000463487 PRKCQQ04759 706 aa20.66■□□□□ 0.9
COL9A3-204ENST00000463487 SLC44A4Q53GD3 710 aa20.66■□□□□ 0.9
COL9A3-204ENST00000463487 KHSRPQ92945 711 aaKnown RBP eCLIP20.66■□□□□ 0.9
COL9A3-204ENST00000463487 ZFYVE19Q96K21 471 aa20.66■□□□□ 0.9
COL9A3-204ENST00000463487 SLC2A13Q96QE2 648 aa20.66■□□□□ 0.9
COL9A3-204ENST00000463487 FAM83CQ9BQN1 747 aa20.66■□□□□ 0.9
COL9A3-204ENST00000463487 SYT11Q9BT88 431 aa20.66■□□□□ 0.9
COL9A3-204ENST00000463487 C8orf33Q9H7E9 229 aaPredicted RBP20.66■□□□□ 0.9
COL9A3-204ENST00000463487 NAALADL1Q9UQQ1 740 aa20.66■□□□□ 0.9
COL9A3-204ENST00000463487 A0A0C4DFX4 3053 aa20.65■□□□□ 0.9
COL9A3-204ENST00000463487 GOLGA8SH3BPF8 625 aa20.65■□□□□ 0.9
COL9A3-204ENST00000463487 STC2O76061 302 aa20.65■□□□□ 0.9
COL9A3-204ENST00000463487 HMBSP08397 361 aa20.65■□□□□ 0.9
COL9A3-204ENST00000463487 DESP17661 470 aa20.65■□□□□ 0.9
COL9A3-204ENST00000463487 NOS2P35228 1153 aa20.65■□□□□ 0.9
COL9A3-204ENST00000463487 MATKP42679 507 aa20.65■□□□□ 0.9
COL9A3-204ENST00000463487 GSCP56915 257 aaPredicted RBP20.65■□□□□ 0.9
COL9A3-204ENST00000463487 RNASE9P60153 205 aaKnown RBP20.65■□□□□ 0.9
COL9A3-204ENST00000463487 ZXDBP98169 803 aa20.65■□□□□ 0.9
COL9A3-204ENST00000463487 MTA1Q13330 715 aa20.65■□□□□ 0.9
COL9A3-204ENST00000463487 RUNX3Q13761 415 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 845.9 ms