RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 DEPDC1Q5TB30 811 aa4.38□□□□□ -1.71
CLK1-206ENST00000461326 ANKRD45Q5TZF3 282 aa4.38□□□□□ -1.71
CLK1-206ENST00000461326 ABHD17BQ5VST6 288 aa4.38□□□□□ -1.71
CLK1-206ENST00000461326 SULT6B1Q6IMI4 303 aa4.38□□□□□ -1.71
CLK1-206ENST00000461326 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.38□□□□□ -1.71
CLK1-206ENST00000461326 JMJD6Q6NYC1 403 aaPredicted RBP4.38□□□□□ -1.71
CLK1-206ENST00000461326 NFRKBQ6P4R8 1299 aa4.38□□□□□ -1.71
CLK1-206ENST00000461326 MMS22LQ6ZRQ5 1243 aa4.38□□□□□ -1.71
CLK1-206ENST00000461326 FSTL5Q8N475 847 aaPredicted RBP4.38□□□□□ -1.71
CLK1-206ENST00000461326 TEX19Q8NA77 164 aa4.38□□□□□ -1.71
CLK1-206ENST00000461326 FAM98AQ8NCA5 519 aaKnown RBP4.38□□□□□ -1.71
CLK1-206ENST00000461326 SSH3Q8TE77 659 aa4.38□□□□□ -1.71
CLK1-206ENST00000461326 SCARB1Q8WTV0 552 aa4.38□□□□□ -1.71
CLK1-206ENST00000461326 TMEM171Q8WVE6 324 aa4.38□□□□□ -1.71
CLK1-206ENST00000461326 SOCS4Q8WXH5 440 aa4.38□□□□□ -1.71
CLK1-206ENST00000461326 RUBCNQ92622 972 aa4.38□□□□□ -1.71
CLK1-206ENST00000461326 FAM167BQ9BTA0 163 aa4.38□□□□□ -1.71
CLK1-206ENST00000461326 PABPC3Q9H361 631 aaKnown RBP4.38□□□□□ -1.71
CLK1-206ENST00000461326 SEPSECSQ9HD40 501 aaKnown RBP4.38□□□□□ -1.71
CLK1-206ENST00000461326 RXFP3Q9NSD7 469 aa4.38□□□□□ -1.71
CLK1-206ENST00000461326 PDP2Q9P2J9 529 aa4.38□□□□□ -1.71
CLK1-206ENST00000461326 NKX1-2Q9UD57 310 aaPredicted RBP4.38□□□□□ -1.71
CLK1-206ENST00000461326 DRG1Q9Y295 367 aaKnown RBP4.38□□□□□ -1.71
CLK1-206ENST00000461326 MAP3K2Q9Y2U5 619 aa4.38□□□□□ -1.71
CLK1-206ENST00000461326 SNX14Q9Y5W7 946 aa4.38□□□□□ -1.71
CLK1-206ENST00000461326 PNMA6EA0A0J9YXQ4 647 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 USP1O94782 785 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 SPDEFO95238 335 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 PRKCBP05771 671 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 HGFP14210 728 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 CD53P19397 219 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 ADORA2AP29274 412 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 DDIT3P35638 169 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 MAPK9P45984 424 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 PTH2RP49190 550 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 DGKQP52824 942 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 SCAPQ12770 1279 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 MAPK7Q13164 816 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 RALBP1Q15311 655 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 DENND2CQ68D51 928 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 VWA1Q6PCB0 445 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 NGDNQ8NEJ9 315 aaKnown RBP4.37□□□□□ -1.71
CLK1-206ENST00000461326 IL17REQ8NFR9 667 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 OR6Y1Q8NGX8 325 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 SUN3Q8TAQ9 357 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 OVCA2Q8WZ82 227 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 FKBP10Q96AY3 582 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 PTCD3Q96EY7 689 aaKnown RBP4.37□□□□□ -1.71
CLK1-206ENST00000461326 UBXN10Q96LJ8 280 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 PYM1Q9BRP8 204 aaKnown RBP4.37□□□□□ -1.71
CLK1-206ENST00000461326 C17orf80Q9BSJ5 609 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 MAF1Q9H063 256 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 RASSF1Q9NS23 344 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 TMLHEQ9NVH6 421 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 SAGE1Q9NXZ1 904 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 NDUFAF4Q9P032 175 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 SRP68Q9UHB9 627 aaKnown RBP4.37□□□□□ -1.71
CLK1-206ENST00000461326 TLK1Q9UKI8 766 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 RIMKLBQ9ULI2 386 aa4.37□□□□□ -1.71
CLK1-206ENST00000461326 C19orf53Q9UNZ5 99 aaPredicted RBP4.37□□□□□ -1.71
CLK1-206ENST00000461326 GXYLT2A0PJZ3 443 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 PIPSLA2A3N6 862 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 HMX3A6NHT5 357 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 ADM5C9JUS6 153 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 J3KTA2 159 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 DHHO43323 396 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 WDR47O94967 919 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 LARGE1O95461 756 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 DLDP09622 509 aaKnown RBP4.36□□□□□ -1.71
CLK1-206ENST00000461326 HTR7P34969 479 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 ADD2P35612 726 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 SUMO2P61956 95 aaKnown RBP4.36□□□□□ -1.71
CLK1-206ENST00000461326 FOXI1Q12951 378 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 ACOX1Q15067 660 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 PTPRRQ15256 657 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 TIGD6Q17RP2 521 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 LCE1AQ5T7P2 110 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 RINT1Q6NUQ1 792 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 MTHFD1LQ6UB35 978 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 SRRM1Q8IYB3 904 aaKnown RBP4.36□□□□□ -1.71
CLK1-206ENST00000461326 CLASRPQ8N2M8 674 aaKnown RBP4.36□□□□□ -1.71
CLK1-206ENST00000461326 SLC30A5Q8TAD4 765 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 MYCBPAPQ8TBZ2 947 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 CPT1BQ92523 772 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 VPS50Q96JG6 964 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 PBKQ96KB5 322 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 PAAF1Q9BRP4 392 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 DUSP26Q9BV47 211 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 SLC29A3Q9BZD2 475 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 ITM2CQ9NQX7 267 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 KLC4Q9NSK0 619 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 KCTD5Q9NXV2 234 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 RRN3Q9NYV6 651 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 EHD3Q9NZN3 535 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 SCAF8Q9UPN6 1271 aaKnown RBP4.36□□□□□ -1.71
CLK1-206ENST00000461326 SLC27A6Q9Y2P4 619 aa4.36□□□□□ -1.71
CLK1-206ENST00000461326 UBE2J1Q9Y385 318 aaPredicted RBP4.36□□□□□ -1.71
CLK1-206ENST00000461326 A0A1B0GVC2 190 aa4.35□□□□□ -1.71
CLK1-206ENST00000461326 A1L4Q6 167 aa4.35□□□□□ -1.71
CLK1-206ENST00000461326 EIF3FO00303 357 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms