RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 DERAQ9Y315 318 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 KAT6BQ8WYB5 2073 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 A0A087X1B8 175 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 TOR1BO14657 336 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 CD3EAPO15446 510 aaKnown RBP3.32□□□□□ -1.88
HPS3-203ENST00000460822 ZBED4O75132 1171 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 ITGALP20701 1170 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 PGDP52209 483 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 RBM5P52756 815 aaKnown RBP eCLIP3.32□□□□□ -1.88
HPS3-203ENST00000460822 MC2RQ01718 297 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 CCDC96Q2M329 555 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 CCDC184Q52MB2 194 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 DCAF17Q5H9S7 520 aaPredicted RBP3.32□□□□□ -1.88
HPS3-203ENST00000460822 TTLL5Q6EMB2 1281 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 ACAD10Q6JQN1 1059 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 DRICH1Q6PGQ1 229 aaPredicted RBP3.32□□□□□ -1.88
HPS3-203ENST00000460822 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.32□□□□□ -1.88
HPS3-203ENST00000460822 NEK10Q6ZWH5 1172 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 CHD1LQ86WJ1 897 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 SYT12Q8IV01 421 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 OR8H2Q8N162 312 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 ZNF276Q8N554 614 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 OR52N2Q8NGI0 321 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 TDRD7Q8NHU6 1098 aaKnown RBP3.32□□□□□ -1.88
HPS3-203ENST00000460822 SLC25A43Q8WUT9 341 aaPredicted RBP3.32□□□□□ -1.88
HPS3-203ENST00000460822 HMGB4Q8WW32 186 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 ZNF668Q96K58 619 aaPredicted RBP3.32□□□□□ -1.88
HPS3-203ENST00000460822 ZBTB45Q96K62 511 aaPredicted RBP3.32□□□□□ -1.88
HPS3-203ENST00000460822 C7orf26Q96N11 449 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 NEU1Q99519 415 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 PRRX2Q99811 253 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 REEP2Q9BRK0 252 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 TTPALQ9BTX7 342 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 TRIM5Q9C035 493 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 ABHD16BQ9H3Z7 469 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 ORC3Q9UBD5 711 aaPredicted RBP3.32□□□□□ -1.88
HPS3-203ENST00000460822 EIF2B4Q9UI10 523 aaKnown RBP3.32□□□□□ -1.88
HPS3-203ENST00000460822 NDRG4Q9ULP0 352 aaKnown RBP3.32□□□□□ -1.88
HPS3-203ENST00000460822 TBX20Q9UMR3 447 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 SORCS3Q9UPU3 1222 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 AATKQ6ZMQ8 1374 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 ADM5C9JUS6 153 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 AGPSO00116 658 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 SPTLC2O15270 562 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 USO1O60763 962 aaKnown RBP3.31□□□□□ -1.88
HPS3-203ENST00000460822 RAMP2O60895 175 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 CER1O95813 267 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 CSF1RP07333 972 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 CYP21A2P08686 494 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 CNPP09543 421 aaKnown RBP3.31□□□□□ -1.88
HPS3-203ENST00000460822 ABCD3P28288 659 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 CCT4P50991 539 aaKnown RBP3.31□□□□□ -1.88
HPS3-203ENST00000460822 RABGGTBP53611 331 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.31□□□□□ -1.88
HPS3-203ENST00000460822 GALNT2Q10471 571 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 TOB2Q14106 344 aaPredicted RBP3.31□□□□□ -1.88
HPS3-203ENST00000460822 CSHL1Q14406 222 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 ANKRD1Q15327 319 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 MEA1Q16626 185 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 TSTQ16762 297 aaKnown RBP3.31□□□□□ -1.88
HPS3-203ENST00000460822 P3H1Q32P28 736 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 CTXN3Q4LDR2 81 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 CERCAMQ5T4B2 595 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 ARHGAP40Q5TG30 622 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 FNDC7Q5VTL7 733 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 TSHZ3Q63HK5 1081 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 RGS7BPQ6MZT1 257 aaPredicted RBP3.31□□□□□ -1.88
HPS3-203ENST00000460822 SYNE3Q6ZMZ3 975 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 MRGPRGQ86SM5 289 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 TTC30AQ86WT1 665 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 SLC15A3Q8IY34 581 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 FSTL5Q8N475 847 aaPredicted RBP3.31□□□□□ -1.88
HPS3-203ENST00000460822 MBD3L2Q8NHZ7 208 aaPredicted RBP3.31□□□□□ -1.88
HPS3-203ENST00000460822 POC1BQ8TC44 478 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 MCRS1Q96EZ8 462 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 HIST1H2AAQ96QV6 131 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 WDR24Q96S15 920 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 PNKPQ96T60 521 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 PTDSS2Q9BVG9 487 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 SMYD2Q9NRG4 433 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 KRT84Q9NSB2 600 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 NDUFAF4Q9P032 175 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 CTTNBP2NLQ9P2B4 639 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 C11orf21Q9P2W6 132 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 HSFX1Q9UBD0 423 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 CCDC78A2IDD5 438 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 VWA3AA6NCI4 1184 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 EFCAB8A8MWE9 144 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 F5H0A9 414 aaPredicted RBP3.31□□□□□ -1.88
HPS3-203ENST00000460822 SUN1O94901 812 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 SCAF4O95104 1147 aaKnown RBP3.31□□□□□ -1.88
HPS3-203ENST00000460822 TFRCP02786 760 aaKnown RBP3.31□□□□□ -1.88
HPS3-203ENST00000460822 CPA1P15085 419 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 RBL1P28749 1068 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 ADORA2AP29274 412 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 POLD2P49005 469 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 CCR9P51686 369 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 ATXN1P54253 815 aaKnown RBP3.31□□□□□ -1.88
HPS3-203ENST00000460822 HSD11B2P80365 405 aa3.31□□□□□ -1.88
HPS3-203ENST00000460822 SF3A3Q12874 501 aaKnown RBP eCLIP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms