RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 TMC8Q8IU68 726 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 GPIHBP1Q8IV16 184 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 UNC45BQ8IWX7 931 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 FNIP1Q8TF40 1166 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 ATXN2LQ8WWM7 1075 aaKnown RBP11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 SUSD6Q92537 303 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 KCTD12Q96CX2 325 aaKnown RBP11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 DDX50Q9BQ39 737 aaKnown RBP11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 PHF7Q9BWX1 381 aaPredicted RBP11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 DCLK3Q9C098 648 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 TRPC7Q9HCX4 862 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 SPTLC3Q9NUV7 552 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 TMEM30AQ9NV96 361 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 THG1LQ9NWX6 298 aaKnown RBP11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 OBP2AQ9NY56 170 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 PRKAG3Q9UGI9 489 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 IP6K2Q9UHH9 426 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 ZNF510Q9Y2H8 683 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 HBS1LQ9Y450 684 aaKnown RBP11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 USP15Q9Y4E8 981 aaPredicted RBP11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 GBF1Q92538 1859 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 PLXNA4Q9HCM2 1894 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 A0A0A6YYK5 440 aaPredicted RBP11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 A0A1W2PQH9 124 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 YJEFN3A6XGL0 299 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 E7ENQ6 273 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 PIK3R2O00459 728 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 SLC9A3R1O14745 358 aaPredicted RBP11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 MBTPS2O43462 519 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 DAB1O75553 588 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 APOEP02649 317 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 CYP1A2P05177 515 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 PDGFRAP16234 1089 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 RRM1P23921 792 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 NOP2P46087 812 aaKnown RBP11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 VAV2P52735 878 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 GALCP54803 685 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 NAP1L1P55209 391 aaKnown RBP11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 RNASE9P60153 205 aaKnown RBP11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 RBM10P98175 930 aaKnown RBP11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 MAMLD1Q13495 774 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 SMAD2Q15796 467 aaKnown RBP11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 SLC25A52Q3SY17 297 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 PRSS36Q5K4E3 855 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 NUGGCQ68CJ6 796 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 PTCRAQ6ISU1 281 aaPredicted RBP11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 CC2D1AQ6P1N0 951 aaPredicted RBP11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 GET4Q7L5D6 327 aaPredicted RBP11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 CMTM8Q8IZV2 173 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 CELF5Q8N6W0 485 aaKnown RBP11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 MAB21L3Q8N8X9 362 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 TDRD5Q8NAT2 981 aaKnown RBP11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 FEZF2Q8TBJ5 459 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 RFFLQ8WZ73 363 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 SMARCD2Q92925 531 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 RNF34Q969K3 372 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 APOL5Q9BWW9 433 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 LRRC3Q9BY71 257 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 IL21Q9HBE4 155 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 MARCH2Q9P0N8 246 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 MYO1AQ9UBC5 1043 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 CYTH4Q9UIA0 394 aa11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 LAMA2P24043 3122 aaKnown RBP11.51□□□□□ -0.57
SMNDC1-203ENST00000460483 BTNL10A8MVZ5 291 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 MBL2P11226 248 aaPredicted RBP11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 GPD1P21695 349 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 CCR1P32246 355 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 PTPN9P43378 593 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 ZNF143P52747 638 aaPredicted RBP11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 AIF1P55008 147 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 SLC7A9P82251 487 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 DLX2Q07687 328 aaPredicted RBP11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 PTP4A2Q12974 167 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 TCEAL1Q15170 157 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 TEAD2Q15562 447 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 CLUL1Q15846 466 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 HADHQ16836 314 aaKnown RBP11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 ARHGAP29Q52LW3 1261 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 MSANTD2Q6P1R3 559 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 GAREM2Q75VX8 874 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 STRADAQ7RTN6 431 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 YAF2Q8IY57 180 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 SYCE1Q8N0S2 351 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 DEFB106AQ8N104 65 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 RNF10Q8N5U6 811 aaKnown RBP11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 SHKBP1Q8TBC3 707 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 FGF13Q92913 245 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 EXOC4Q96A65 974 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 PLD4Q96BZ4 506 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 MCEEQ96PE7 176 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 SLC2A13Q96QE2 648 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 CNPY3Q9BT09 278 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 IRX2Q9BZI1 471 aaPredicted RBP11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 THAP2Q9H0W7 228 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 SMOC2Q9H3U7 446 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 FAM204AQ9H8W3 233 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 ZFP14Q9HCL3 533 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms