RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 RALAP11233 206 aa23.96■■□□□ 1.43
PTPN4-207ENST00000460162 PLA2G4AP47712 749 aa23.96■■□□□ 1.43
PTPN4-207ENST00000460162 RAD23BP54727 409 aa23.96■■□□□ 1.43
PTPN4-207ENST00000460162 CBWD6Q4V339 395 aa23.96■■□□□ 1.43
PTPN4-207ENST00000460162 CBWD3Q5JTY5 395 aa23.96■■□□□ 1.43
PTPN4-207ENST00000460162 CBWD5Q5RIA9 395 aa23.96■■□□□ 1.43
PTPN4-207ENST00000460162 EMC10Q5UCC4 262 aa23.96■■□□□ 1.43
PTPN4-207ENST00000460162 ARHGAP17Q68EM7 881 aa23.96■■□□□ 1.43
PTPN4-207ENST00000460162 Q6ZNB5 142 aa23.96■■□□□ 1.43
PTPN4-207ENST00000460162 SCD5Q86SK9 330 aa23.96■■□□□ 1.43
PTPN4-207ENST00000460162 TTC30AQ86WT1 665 aa23.96■■□□□ 1.43
PTPN4-207ENST00000460162 SMARCE1Q969G3 411 aa23.96■■□□□ 1.43
PTPN4-207ENST00000460162 TIGD1Q96MW7 591 aa23.96■■□□□ 1.43
PTPN4-207ENST00000460162 BBS2Q9BXC9 721 aa23.96■■□□□ 1.43
PTPN4-207ENST00000460162 SMOC1Q9H4F8 434 aa23.96■■□□□ 1.43
PTPN4-207ENST00000460162 RXFP3Q9NSD7 469 aa23.96■■□□□ 1.43
PTPN4-207ENST00000460162 DNAJC17Q9NVM6 304 aaKnown RBP23.96■■□□□ 1.43
PTPN4-207ENST00000460162 BCCIPQ9P287 314 aaKnown RBP eCLIP23.96■■□□□ 1.43
PTPN4-207ENST00000460162 WDR35Q9P2L0 1181 aa23.96■■□□□ 1.43
PTPN4-207ENST00000460162 INVSQ9Y283 1065 aa23.96■■□□□ 1.43
PTPN4-207ENST00000460162 COQ4Q9Y3A0 265 aa23.96■■□□□ 1.43
PTPN4-207ENST00000460162 STARD13Q9Y3M8 1113 aa23.96■■□□□ 1.43
PTPN4-207ENST00000460162 ABCA7Q8IZY2 2146 aa23.96■■□□□ 1.43
PTPN4-207ENST00000460162 MDM4O15151 490 aa23.95■■□□□ 1.42
PTPN4-207ENST00000460162 CAVIN2O95810 425 aa23.95■■□□□ 1.42
PTPN4-207ENST00000460162 TYRP14679 529 aa23.95■■□□□ 1.42
PTPN4-207ENST00000460162 BCKDHBP21953 392 aa23.95■■□□□ 1.42
PTPN4-207ENST00000460162 P2RY2P41231 377 aa23.95■■□□□ 1.42
PTPN4-207ENST00000460162 STPG1Q5TH74 334 aa23.95■■□□□ 1.42
PTPN4-207ENST00000460162 UBXN6Q9BZV1 441 aa23.95■■□□□ 1.42
PTPN4-207ENST00000460162 ZDHHC4Q9NPG8 344 aa23.95■■□□□ 1.42
PTPN4-207ENST00000460162 NUDT5Q9UKK9 219 aa23.95■■□□□ 1.42
PTPN4-207ENST00000460162 LAMA1P25391 3075 aa23.95■■□□□ 1.42
PTPN4-207ENST00000460162 TCRBV21S2A2A0A5A6 115 aa23.94■■□□□ 1.42
PTPN4-207ENST00000460162 SLC8A3P57103 927 aa23.94■■□□□ 1.42
PTPN4-207ENST00000460162 RAB41Q5JT25 222 aa23.94■■□□□ 1.42
PTPN4-207ENST00000460162 ANKRD40Q6AI12 368 aa23.94■■□□□ 1.42
PTPN4-207ENST00000460162 TCEAL6Q6IPX3 200 aa23.94■■□□□ 1.42
PTPN4-207ENST00000460162 CYP2U1Q7Z449 544 aa23.94■■□□□ 1.42
PTPN4-207ENST00000460162 ARHGAP18Q8N392 663 aa23.94■■□□□ 1.42
PTPN4-207ENST00000460162 TCEAL3Q969E4 200 aa23.94■■□□□ 1.42
PTPN4-207ENST00000460162 EDEM2Q9BV94 578 aa23.94■■□□□ 1.42
PTPN4-207ENST00000460162 ARMCX3Q9UH62 379 aaPredicted RBP23.94■■□□□ 1.42
PTPN4-207ENST00000460162 CNOT1A5YKK6 2376 aaKnown RBP23.94■■□□□ 1.42
PTPN4-207ENST00000460162 STC2O76061 302 aa23.93■■□□□ 1.42
PTPN4-207ENST00000460162 PMS1P54277 932 aaKnown RBP23.93■■□□□ 1.42
PTPN4-207ENST00000460162 YWHAEP62258 255 aaKnown RBP23.93■■□□□ 1.42
PTPN4-207ENST00000460162 CUL2Q13617 745 aa23.93■■□□□ 1.42
PTPN4-207ENST00000460162 BYSLQ13895 437 aaKnown RBP23.93■■□□□ 1.42
PTPN4-207ENST00000460162 TPGS1Q6ZTW0 290 aa23.93■■□□□ 1.42
PTPN4-207ENST00000460162 PIGZQ86VD9 579 aa23.93■■□□□ 1.42
PTPN4-207ENST00000460162 MIB1Q86YT6 1006 aa23.93■■□□□ 1.42
PTPN4-207ENST00000460162 ANKRD52Q8NB46 1076 aa23.93■■□□□ 1.42
PTPN4-207ENST00000460162 HMGB4Q8WW32 186 aa23.93■■□□□ 1.42
PTPN4-207ENST00000460162 TATDN2Q93075 761 aa23.93■■□□□ 1.42
PTPN4-207ENST00000460162 SLC35C1Q96A29 364 aa23.93■■□□□ 1.42
PTPN4-207ENST00000460162 ZNF510Q9Y2H8 683 aa23.93■■□□□ 1.42
PTPN4-207ENST00000460162 TRIM49BA6NDI0 452 aa23.92■■□□□ 1.42
PTPN4-207ENST00000460162 PSMA7O14818 248 aa23.92■■□□□ 1.42
PTPN4-207ENST00000460162 TM4SF5O14894 197 aa23.92■■□□□ 1.42
PTPN4-207ENST00000460162 TRIM24O15164 1050 aa23.92■■□□□ 1.42
PTPN4-207ENST00000460162 HOXB2P14652 356 aa23.92■■□□□ 1.42
PTPN4-207ENST00000460162 COG7P83436 770 aa23.92■■□□□ 1.42
PTPN4-207ENST00000460162 STIM1Q13586 685 aa23.92■■□□□ 1.42
PTPN4-207ENST00000460162 RNF43Q68DV7 783 aa23.92■■□□□ 1.42
PTPN4-207ENST00000460162 RASAL2Q9UJF2 1139 aa23.92■■□□□ 1.42
PTPN4-207ENST00000460162 NTSR1P30989 418 aa23.91■■□□□ 1.42
PTPN4-207ENST00000460162 PPP1R2P41236 205 aa23.91■■□□□ 1.42
PTPN4-207ENST00000460162 DGKGP49619 791 aa23.91■■□□□ 1.42
PTPN4-207ENST00000460162 BCAT1P54687 386 aa23.91■■□□□ 1.42
PTPN4-207ENST00000460162 LPCAT2Q7L5N7 544 aa23.91■■□□□ 1.42
PTPN4-207ENST00000460162 ELOA2Q8IYF1 753 aaPredicted RBP23.91■■□□□ 1.42
PTPN4-207ENST00000460162 ERCC4Q92889 916 aaPredicted RBP23.91■■□□□ 1.42
PTPN4-207ENST00000460162 DCLK3Q9C098 648 aa23.91■■□□□ 1.42
PTPN4-207ENST00000460162 METTL14Q9HCE5 456 aaKnown RBP23.91■■□□□ 1.42
PTPN4-207ENST00000460162 HCN2Q9UL51 889 aa23.91■■□□□ 1.42
PTPN4-207ENST00000460162 LNP1A1A4G5 178 aa23.9■■□□□ 1.42
PTPN4-207ENST00000460162 TBXAS1P24557 533 aaPredicted RBP23.9■■□□□ 1.42
PTPN4-207ENST00000460162 DHPSP49366 369 aaPredicted RBP23.9■■□□□ 1.42
PTPN4-207ENST00000460162 YWHAGP61981 247 aaKnown RBP eCLIP23.9■■□□□ 1.42
PTPN4-207ENST00000460162 GOLGA7BQ2TAP0 167 aa23.9■■□□□ 1.42
PTPN4-207ENST00000460162 MAP7D1Q3KQU3 841 aa23.9■■□□□ 1.42
PTPN4-207ENST00000460162 SGO2Q562F6 1265 aa23.9■■□□□ 1.42
PTPN4-207ENST00000460162 SPDYCQ5MJ68 293 aa23.9■■□□□ 1.42
PTPN4-207ENST00000460162 EGFLAMQ63HQ2 1017 aa23.9■■□□□ 1.42
PTPN4-207ENST00000460162 PGBD3Q8N328 593 aa23.9■■□□□ 1.42
PTPN4-207ENST00000460162 RLN3Q8WXF3 142 aa23.9■■□□□ 1.42
PTPN4-207ENST00000460162 TSPAN16Q9UKR8 245 aa23.9■■□□□ 1.42
PTPN4-207ENST00000460162 STRIP2Q9ULQ0 834 aa23.9■■□□□ 1.42
PTPN4-207ENST00000460162 CIZ1Q9ULV3 898 aaPredicted RBP23.9■■□□□ 1.42
PTPN4-207ENST00000460162 ACACBO00763 2458 aa23.89■■□□□ 1.42
PTPN4-207ENST00000460162 XPO1O14980 1071 aaKnown RBP23.89■■□□□ 1.41
PTPN4-207ENST00000460162 KHNYNO15037 678 aaKnown RBP23.89■■□□□ 1.41
PTPN4-207ENST00000460162 GABRG2P18507 467 aa23.89■■□□□ 1.41
PTPN4-207ENST00000460162 CHKAP35790 457 aa23.89■■□□□ 1.41
PTPN4-207ENST00000460162 DPP6P42658 865 aa23.89■■□□□ 1.41
PTPN4-207ENST00000460162 TKTL1P51854 596 aa23.89■■□□□ 1.41
PTPN4-207ENST00000460162 BST2Q10589 180 aaKnown RBP23.89■■□□□ 1.41
PTPN4-207ENST00000460162 EFEMP1Q12805 493 aa23.89■■□□□ 1.41
PTPN4-207ENST00000460162 SDE2Q6IQ49 451 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms