RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 FAM171BQ6P995 826 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 LRSAM1Q6UWE0 723 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 CRELD2Q6UXH1 353 aaPredicted RBP6.04□□□□□ -1.44
VPS8-214ENST00000458721 LIMS2Q7Z4I7 341 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 BRAPQ7Z569 592 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 SYT9Q86SS6 491 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 C1orf127Q8N9H9 656 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 IL17RCQ8NAC3 791 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 PDZD8Q8NEN9 1154 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 RASSF8Q8NHQ8 419 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 PIGKQ92643 395 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 RAD54LQ92698 747 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 CALR3Q96L12 384 aaKnown RBP6.04□□□□□ -1.44
VPS8-214ENST00000458721 SLITRK1Q96PX8 696 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 FNBP1Q96RU3 617 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 PNKPQ96T60 521 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 STRA6Q9BX79 667 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 TPSD1Q9BZJ3 242 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 ZDHHC5Q9C0B5 715 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 PHACTR1Q9C0D0 580 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 SUV39H2Q9H5I1 410 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 FAM124BQ9H5Z6 455 aaPredicted RBP6.04□□□□□ -1.44
VPS8-214ENST00000458721 CAPN10Q9HC96 672 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 BLOC1S4Q9NUP1 217 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 RBAKQ9NYW8 714 aaPredicted RBP6.04□□□□□ -1.44
VPS8-214ENST00000458721 TRPM5Q9NZQ8 1165 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 DKK4Q9UBT3 224 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 PILRBQ9UKJ0 227 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 CDH9Q9ULB4 789 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 SLC6A14Q9UN76 642 aa6.04□□□□□ -1.44
VPS8-214ENST00000458721 ELOA3CA0A087WX78 387 aaPredicted RBP6.03□□□□□ -1.44
VPS8-214ENST00000458721 E2F8A0AVK6 867 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 C2orf78A6NCI8 922 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 ELOA3DA6NLF2 546 aaPredicted RBP6.03□□□□□ -1.44
VPS8-214ENST00000458721 PATE3B3GLJ2 98 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 TAF4O00268 1085 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 LEFTY2O00292 366 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 HOXC11O43248 304 aaPredicted RBP6.03□□□□□ -1.44
VPS8-214ENST00000458721 SIN3BO75182 1162 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 TMEM191BP0C7N4 346 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 ZNF883P0CG24 379 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 ADH5P11766 374 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 PLCG1P19174 1290 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 BCKDHBP21953 392 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 ALAS2P22557 587 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 ADSSP30520 456 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 HOXC13P31276 330 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 KIR2DL1P43626 348 aaPredicted RBP6.03□□□□□ -1.44
VPS8-214ENST00000458721 ZNF132P52740 706 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 SIM1P81133 766 aaPredicted RBP6.03□□□□□ -1.44
VPS8-214ENST00000458721 RBP5P82980 135 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 TFAMQ00059 246 aaKnown RBP6.03□□□□□ -1.44
VPS8-214ENST00000458721 RING1Q06587 406 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 E2F5Q15329 346 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 DDR2Q16832 855 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 GAB4Q2WGN9 574 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 ELOA3BQ3SY89 546 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 C2orf27AQ580R0 203 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 L1TD1Q5T7N2 865 aaKnown RBP6.03□□□□□ -1.44
VPS8-214ENST00000458721 NAIF1Q69YI7 327 aaPredicted RBP6.03□□□□□ -1.44
VPS8-214ENST00000458721 STXBP4Q6ZWJ1 553 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 ZNF720Q7Z2F6 126 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 RAB44Q7Z6P3 723 aaPredicted RBP6.03□□□□□ -1.44
VPS8-214ENST00000458721 GLRX5Q86SX6 157 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 ARL14EPQ8N8R7 260 aaPredicted RBP6.03□□□□□ -1.44
VPS8-214ENST00000458721 STKLD1Q8NE28 680 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 DEFB124Q8NES8 71 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 ELOA3Q8NG57 546 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 CXorf38Q8TB03 319 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 ANKRD36BP1Q96IX9 119 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 C8orf48Q96LL4 319 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 ACCSQ96QU6 501 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 SLC22A12Q96S37 553 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 SYT15Q9BQS2 421 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 ELOVL4Q9GZR5 314 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 TMLHEQ9NVH6 421 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 BCCIPQ9P287 314 aaKnown RBP eCLIP6.03□□□□□ -1.44
VPS8-214ENST00000458721 MAGEC2Q9UBF1 373 aaPredicted RBP6.03□□□□□ -1.44
VPS8-214ENST00000458721 GTF3C4Q9UKN8 822 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 AGAP1Q9UPQ3 857 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 R3HCC1Q9Y3T6 440 aaKnown RBP6.03□□□□□ -1.44
VPS8-214ENST00000458721 SNX9Q9Y5X1 595 aa6.03□□□□□ -1.44
VPS8-214ENST00000458721 HELZ2Q9BYK8 2649 aaKnown RBP6.03□□□□□ -1.44
VPS8-214ENST00000458721 LAMA5O15230 3695 aa6.02□□□□□ -1.45
VPS8-214ENST00000458721 MYO18AQ92614 2054 aaKnown RBP6.02□□□□□ -1.45
VPS8-214ENST00000458721 APC2O95996 2303 aa6.02□□□□□ -1.45
VPS8-214ENST00000458721 ADAMTS9Q9P2N4 1935 aa6.02□□□□□ -1.45
VPS8-214ENST00000458721 NPHP3-ACAD11A0A0J9YXS1 232 aa6.02□□□□□ -1.45
VPS8-214ENST00000458721 TCRBV21S2A2A0A5A6 115 aa6.02□□□□□ -1.45
VPS8-214ENST00000458721 FRMD3A2A2Y4 597 aa6.02□□□□□ -1.45
VPS8-214ENST00000458721 ZNF840PA6NDX5 716 aa6.02□□□□□ -1.45
VPS8-214ENST00000458721 ANKRD63C9JTQ0 380 aa6.02□□□□□ -1.45
VPS8-214ENST00000458721 SGK1O00141 431 aa6.02□□□□□ -1.45
VPS8-214ENST00000458721 NPC1O15118 1278 aa6.02□□□□□ -1.45
VPS8-214ENST00000458721 HYAL3O43820 417 aaPredicted RBP6.02□□□□□ -1.45
VPS8-214ENST00000458721 TACC1O75410 805 aa6.02□□□□□ -1.45
VPS8-214ENST00000458721 RTN3O95197 1032 aaPredicted RBP6.02□□□□□ -1.45
VPS8-214ENST00000458721 KLF8O95600 359 aaPredicted RBP6.02□□□□□ -1.45
VPS8-214ENST00000458721 CAPNS1P04632 268 aa6.02□□□□□ -1.45
VPS8-214ENST00000458721 CFIP05156 583 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms