RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 HACE1Q8IYU2 909 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 BEST2Q8NFU1 509 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 NLGN2Q8NFZ4 835 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 OPTNQ96CV9 577 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 ZBTB10Q96DT7 871 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 STAMBPL1Q96FJ0 436 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 SIGLEC10Q96LC7 697 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 HSFY1Q96LI6 401 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 C7orf26Q96N11 449 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 GCOM2Q9BZD3 368 aaPredicted RBP12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 DNAI2Q9GZS0 605 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 RAB6CQ9H0N0 254 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 ADAMTS10Q9H324 1103 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 KCNK13Q9HB14 408 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 GDAP2Q9NXN4 497 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 MORF4L1Q9UBU8 362 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 HESX1Q9UBX0 185 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 KAT6AQ92794 2004 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 H3BRB1 525 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 BIRC5O15392 142 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 DDNO94850 711 aaPredicted RBP12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 ANP32DO95626 131 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 DLDP09622 509 aaKnown RBP12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 HOXA11P31270 313 aaPredicted RBP12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 GCKP35557 465 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 BCAT1P54687 386 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 YWHAGP61981 247 aaKnown RBP eCLIP12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 IGBP1P78318 339 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 BST2Q10589 180 aaKnown RBP12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 SNAPC2Q13487 334 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 E2F5Q15329 346 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 GRIK4Q16099 956 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 XKR4Q5GH76 650 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 ZNF449Q6P9G9 518 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 C1orf228Q6PIY5 440 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 CHRDL2Q6WN34 429 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 USP50Q70EL3 339 aaPredicted RBP12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 ZNF534Q76KX8 674 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 TMEM130Q8N3G9 435 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 ANKRD52Q8NB46 1076 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 FAM13CQ8NE31 585 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 GIMAP7Q8NHV1 300 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 NLRP7Q8WX94 980 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 PTPRN2Q92932 1015 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 PTCD3Q96EY7 689 aaKnown RBP12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 EBNA1BP2Q99848 306 aaKnown RBP12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 MRPL45Q9BRJ2 306 aaKnown RBP12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 TBC1D10AQ9BXI6 508 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 MMADHCQ9H3L0 296 aaPredicted RBP12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 TUT1Q9H6E5 874 aaKnown RBP12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 RNPEPL1Q9HAU8 725 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 EIF2B3Q9NR50 452 aaKnown RBP12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 BATF3Q9NR55 127 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 MTMR10Q9NXD2 777 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 SIRPGQ9P1W8 387 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 ZC3H7BQ9UGR2 993 aaKnown RBP12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 PLLPQ9Y342 182 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 NME7Q9Y5B8 376 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 USP3Q9Y6I4 520 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 PPP1R12AO14974 1030 aaPredicted RBP12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 RFPL1O75677 317 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 DGKIO75912 1065 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 KRT38O76015 456 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 ALDH1A2O94788 518 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 LMNAP02545 664 aaKnown RBP12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 GNAZP19086 355 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 CYP2F1P24903 491 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 TARSP26639 723 aaKnown RBP12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 FDFT1P37268 417 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 SERPINB4P48594 390 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 CA9Q16790 459 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 DUSP28Q4G0W2 176 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 TAF1BQ53T94 588 aaPredicted RBP12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 DLK2Q6UY11 383 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 BZW1Q7L1Q6 419 aaKnown RBP12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 BNIPLQ7Z465 357 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 PRPF39Q86UA1 669 aaKnown RBP12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 CCNJLQ8IV13 435 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 VPS52Q8N1B4 723 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 GPRC5AQ8NFJ5 357 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 GSDMBQ8TAX9 411 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 ACMSDQ8TDX5 336 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 OLFM3Q96PB7 478 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 SRPK1Q96SB4 655 aaKnown RBP12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 NPHS2Q9NP85 383 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 NGRNQ9NPE2 291 aaKnown RBP12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 MOCS1Q9NZB8 636 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 HAO1Q9UJM8 370 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 UBQLN1Q9UMX0 589 aaKnown RBP12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 PCDHA11Q9Y5I1 949 aa12.98□□□□□ -0.33
ECHDC1-209ENST00000454591 A8MUI8 341 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 TRIM49D1C9J1S8 452 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 PIRO00625 290 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 COPEO14579 308 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 CCDC22O60826 627 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 PEX11AO75192 247 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 GPR32O75388 356 aa12.97□□□□□ -0.33
ECHDC1-209ENST00000454591 CSDE1O75534 798 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms