RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 NFKBIDQ8NI38 313 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 CPT1CQ8TCG5 803 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 NOC3LQ8WTT2 800 aaKnown RBP4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 KBTBD7Q8WVZ9 684 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 NCSTNQ92542 709 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 TUBGCP3Q96CW5 907 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 CYFIP2Q96F07 1278 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 C1orf74Q96LT6 269 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 AGAP3Q96P47 875 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 DIRC2Q96SL1 478 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 RBM15Q96T37 977 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 TXN2Q99757 166 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 VRK1Q99986 396 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 FAM118BQ9BPY3 351 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 UTP14AQ9BVJ6 771 aaKnown RBP4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 CDADC1Q9BWV3 514 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 KRTAP9-8Q9BYQ0 159 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 REXO4Q9GZR2 422 aaKnown RBP4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 ABCG8Q9H221 673 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 ADAM7Q9H2U9 754 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 NSUN3Q9H649 340 aaKnown RBP4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 TASP1Q9H6P5 420 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 KCNH7Q9NS40 1196 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 TDP1Q9NUW8 608 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 ANO10Q9NW15 660 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 PLA2G3Q9NZ20 509 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 TRAF3IP3Q9Y228 551 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 PIN4Q9Y237 131 aaKnown RBP4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 DNAJC16Q9Y2G8 782 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 NUMBLQ9Y6R0 609 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 ATP8B3O60423 1300 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 NPHP3-ACAD11A0A0J9YXS1 232 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 hCG_1809904A0A1W2PP81 198 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 A0A1W2PPE2 198 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 A0A1W2PR64 198 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 A0A1W2PRV1 198 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 TCRBV5S4A2TA0A5A2 114 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 ARHGEF37A1IGU5 675 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 LRRD1A4D1F6 860 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 A4D1N5 150 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 VWA3AA6NCI4 1184 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 GPR89AB7ZAQ6 455 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 STX16-NPEPL1H3BU86 382 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 STX16O14662 325 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 TNPO2O14787 897 aaKnown RBP4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 ENTPD3O75355 529 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 BCAS2O75934 225 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 GPR89BP0CG08 455 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 FDPSP14324 419 aaKnown RBP4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 EPHA8P29322 1005 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 FNTBP49356 437 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 LUMP51884 338 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 ALDH18A1P54886 795 aaKnown RBP4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 STARD6P59095 220 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 PPARAQ07869 468 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 MESP2Q0VG99 397 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 KIF5AQ12840 1032 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 SLC13A2Q13183 592 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 NOMO1Q15155 1222 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 RPS6KA2Q15349 733 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 PKN1Q16512 942 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 FIGNQ5HY92 759 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 C9orf152Q5JTZ5 239 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 GLRA4Q5JXX5 417 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 CEP128Q6ZU80 1094 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 RAB11FIP2Q7L804 512 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 OTOAQ7RTW8 1153 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 RABEPKQ7Z6M1 372 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 CNTROBQ8N137 903 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 LRRC43Q8N309 656 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 GALNT4Q8N4A0 578 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 OR14C36Q8NHC7 312 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 RFWD2Q8NHY2 731 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 FIBINQ8TAL6 211 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 NEK9Q8TD19 979 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 RNF139Q8WU17 664 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 SLC22A17Q8WUG5 538 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 CASP10Q92851 521 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 RAB24Q969Q5 203 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 HHIPL1Q96JK4 782 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 FAM84AQ96KN4 292 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 SAMD11Q96NU1 681 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 CTAGE1Q96RT6 745 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 TUBGCP5Q96RT8 1024 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 ABHD1Q96SE0 405 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 SLC38A3Q99624 504 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 MYL10Q9BUA6 226 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 TRIM54Q9BYV2 358 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 OSBPL6Q9BZF3 934 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 SLC6A17Q9H1V8 727 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 DPH5Q9H2P9 285 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 EPB41L4BQ9H329 900 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 GREM2Q9H772 168 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 NRIP3Q9NQ35 241 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 A1CFQ9NQ94 594 aaKnown RBP4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 TCF7L2Q9NQB0 619 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 DDX18Q9NVP1 670 aaKnown RBP4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 ERVK13-1Q9NX77 482 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 NINJ2Q9NZG7 142 aa4.69□□□□□ -1.66
HMGB3P21-201ENST00000452483 SEPT10Q9P0V9 454 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms